RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 SLFN5Q08AF3 891 aa18.15■□□□□ 0.5
EGR1-201ENST00000239938 TRMT2AQ8IZ69 625 aaKnown RBP18.14■□□□□ 0.49
EGR1-201ENST00000239938 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
EGR1-201ENST00000239938 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
EGR1-201ENST00000239938 ATP10AO60312 1499 aa18.11■□□□□ 0.49
EGR1-201ENST00000239938 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
EGR1-201ENST00000239938 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
EGR1-201ENST00000239938 RSPH4AQ5TD94 716 aa18.11■□□□□ 0.49
EGR1-201ENST00000239938 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
EGR1-201ENST00000239938 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
EGR1-201ENST00000239938 BCAR3O75815 825 aa18.1■□□□□ 0.49
EGR1-201ENST00000239938 USP19O94966 1318 aa18.1■□□□□ 0.49
EGR1-201ENST00000239938 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
EGR1-201ENST00000239938 IGHDP01880 384 aa18.09■□□□□ 0.49
EGR1-201ENST00000239938 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
EGR1-201ENST00000239938 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.48
EGR1-201ENST00000239938 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
EGR1-201ENST00000239938 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
EGR1-201ENST00000239938 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
EGR1-201ENST00000239938 MYOM1P52179 1685 aa18.07■□□□□ 0.48
EGR1-201ENST00000239938 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
EGR1-201ENST00000239938 PLXNC1O60486 1568 aa18.06■□□□□ 0.48
EGR1-201ENST00000239938 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
EGR1-201ENST00000239938 SYNMO15061 1565 aa18.06■□□□□ 0.48
EGR1-201ENST00000239938 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
EGR1-201ENST00000239938 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
EGR1-201ENST00000239938 APAF1O14727 1248 aa18.05■□□□□ 0.48
EGR1-201ENST00000239938 SEC24BO95487 1268 aa18.05■□□□□ 0.48
EGR1-201ENST00000239938 NKTRP30414 1462 aaKnown RBP18.05■□□□□ 0.48
EGR1-201ENST00000239938 ARHGAP5Q13017 1502 aa18.05■□□□□ 0.48
EGR1-201ENST00000239938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.482e-7■■■■■ 30.6
EGR1-201ENST00000239938 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
EGR1-201ENST00000239938 ARXQ96QS3 562 aa18.01■□□□□ 0.47
EGR1-201ENST00000239938 DUOX2Q9NRD8 1548 aa18■□□□□ 0.47
EGR1-201ENST00000239938 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
EGR1-201ENST00000239938 NLRP1Q9C000 1473 aa17.99■□□□□ 0.47
EGR1-201ENST00000239938 NPC1L1Q9UHC9 1359 aa17.98■□□□□ 0.47
EGR1-201ENST00000239938 SPHKAPQ2M3C7 1700 aa17.97■□□□□ 0.47
EGR1-201ENST00000239938 E9PSI1 815 aa17.97■□□□□ 0.47
EGR1-201ENST00000239938 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
EGR1-201ENST00000239938 POGKQ9P215 609 aa17.97■□□□□ 0.47
EGR1-201ENST00000239938 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
EGR1-201ENST00000239938 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
EGR1-201ENST00000239938 CARD14Q9BXL6 1004 aa17.95■□□□□ 0.46
EGR1-201ENST00000239938 CDCA8Q53HL2 280 aa17.94■□□□□ 0.46
EGR1-201ENST00000239938 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
EGR1-201ENST00000239938 PDE3AQ14432 1141 aa17.93■□□□□ 0.46
EGR1-201ENST00000239938 CEP152O94986 1710 aa17.93■□□□□ 0.46
EGR1-201ENST00000239938 CLTCL1P53675 1640 aa17.92■□□□□ 0.46
EGR1-201ENST00000239938 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
EGR1-201ENST00000239938 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
EGR1-201ENST00000239938 KDM5AP29375 1690 aaKnown RBP17.91■□□□□ 0.46
EGR1-201ENST00000239938 TRPM2O94759 1503 aa17.91■□□□□ 0.46
EGR1-201ENST00000239938 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
EGR1-201ENST00000239938 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
EGR1-201ENST00000239938 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
EGR1-201ENST00000239938 TNNQ9UQP3 1299 aa17.9■□□□□ 0.46
EGR1-201ENST00000239938 CENPJQ9HC77 1338 aaPredicted RBP17.9■□□□□ 0.46
EGR1-201ENST00000239938 ERVK-7P63135 1459 aa17.89■□□□□ 0.46
EGR1-201ENST00000239938 PTPRTO14522 1441 aa17.89■□□□□ 0.45
EGR1-201ENST00000239938 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
EGR1-201ENST00000239938 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
EGR1-201ENST00000239938 PCDHB15Q9Y5E8 787 aa17.88■□□□□ 0.45
EGR1-201ENST00000239938 RLBP1P12271 317 aa17.88■□□□□ 0.45
EGR1-201ENST00000239938 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
EGR1-201ENST00000239938 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
EGR1-201ENST00000239938 RARSP54136 660 aaKnown RBP17.85■□□□□ 0.45
EGR1-201ENST00000239938 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
EGR1-201ENST00000239938 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
EGR1-201ENST00000239938 RRP7AQ9Y3A4 280 aaKnown RBP17.84■□□□□ 0.45
EGR1-201ENST00000239938 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
EGR1-201ENST00000239938 PLCH2O75038 1416 aa17.84■□□□□ 0.45
EGR1-201ENST00000239938 KIAA1210Q9ULL0 1709 aa17.83■□□□□ 0.45
EGR1-201ENST00000239938 POLR3AO14802 1390 aaPredicted RBP17.83■□□□□ 0.45
EGR1-201ENST00000239938 BECN1Q14457 450 aa17.83■□□□□ 0.45
EGR1-201ENST00000239938 TBC1D32Q96NH3 1257 aa17.83■□□□□ 0.45
EGR1-201ENST00000239938 TBC1D2Q9BYX2 928 aa17.83■□□□□ 0.45
EGR1-201ENST00000239938 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
EGR1-201ENST00000239938 ABCC1P33527 1531 aa17.83■□□□□ 0.44
EGR1-201ENST00000239938 NGEFQ8N5V2 710 aa17.83■□□□□ 0.44
EGR1-201ENST00000239938 RRAGDQ9NQL2 400 aaPredicted RBP17.83■□□□□ 0.44
EGR1-201ENST00000239938 STAC3Q96MF2 364 aa17.82■□□□□ 0.44
EGR1-201ENST00000239938 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
EGR1-201ENST00000239938 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
EGR1-201ENST00000239938 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
EGR1-201ENST00000239938 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
EGR1-201ENST00000239938 ABCA6Q8N139 1617 aa17.81■□□□□ 0.44
EGR1-201ENST00000239938 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
EGR1-201ENST00000239938 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
EGR1-201ENST00000239938 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
EGR1-201ENST00000239938 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
EGR1-201ENST00000239938 UGGT1Q9NYU2 1555 aa17.8■□□□□ 0.44
EGR1-201ENST00000239938 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
EGR1-201ENST00000239938 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
EGR1-201ENST00000239938 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
EGR1-201ENST00000239938 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
EGR1-201ENST00000239938 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
EGR1-201ENST00000239938 TNNT2P45379 298 aaPredicted RBP17.78■□□□□ 0.44
EGR1-201ENST00000239938 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
EGR1-201ENST00000239938 TET3O43151 1660 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms