RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
TNFAIP3-201ENST00000237289 UGGT1Q9NYU2 1555 aa15.44■□□□□ 0.06
TNFAIP3-201ENST00000237289 TRPM2O94759 1503 aa15.44■□□□□ 0.06
TNFAIP3-201ENST00000237289 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
TNFAIP3-201ENST00000237289 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
TNFAIP3-201ENST00000237289 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
TNFAIP3-201ENST00000237289 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
TNFAIP3-201ENST00000237289 PROSER2Q86WR7 435 aaPredicted RBP15.42■□□□□ 0.06
TNFAIP3-201ENST00000237289 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
TNFAIP3-201ENST00000237289 NBPF8Q3BBV2 869 aa15.42■□□□□ 0.06
TNFAIP3-201ENST00000237289 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
TNFAIP3-201ENST00000237289 TMF1P82094 1093 aa15.41■□□□□ 0.06
TNFAIP3-201ENST00000237289 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
TNFAIP3-201ENST00000237289 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
TNFAIP3-201ENST00000237289 VWDEQ8N2E2 1590 aa15.41■□□□□ 0.06
TNFAIP3-201ENST00000237289 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
TNFAIP3-201ENST00000237289 LTKP29376 864 aa15.4■□□□□ 0.06
TNFAIP3-201ENST00000237289 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
TNFAIP3-201ENST00000237289 E9PCH4 1651 aa15.4■□□□□ 0.06
TNFAIP3-201ENST00000237289 HSPA5P11021 654 aaKnown RBP15.4■□□□□ 0.06
TNFAIP3-201ENST00000237289 C14orf93Q9H972 538 aaKnown RBP15.39■□□□□ 0.05
TNFAIP3-201ENST00000237289 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
TNFAIP3-201ENST00000237289 ST20-MTHFSA0A0A6YYL1 179 aa15.37■□□□□ 0.05
TNFAIP3-201ENST00000237289 TBX22Q9Y458 520 aa15.36■□□□□ 0.05
TNFAIP3-201ENST00000237289 MINK1Q8N4C8 1332 aaPredicted RBP15.36■□□□□ 0.05
TNFAIP3-201ENST00000237289 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
TNFAIP3-201ENST00000237289 CENPJQ9HC77 1338 aaPredicted RBP15.36■□□□□ 0.05
TNFAIP3-201ENST00000237289 SPHKAPQ2M3C7 1700 aa15.35■□□□□ 0.05
TNFAIP3-201ENST00000237289 SETD1BQ9UPS6 1966 aaKnown RBP15.35■□□□□ 0.05
TNFAIP3-201ENST00000237289 PRAM1Q96QH2 718 aa15.35■□□□□ 0.05
TNFAIP3-201ENST00000237289 USP47Q96K76 1375 aa15.35■□□□□ 0.05
TNFAIP3-201ENST00000237289 SPATA31D1Q6ZQQ2 1576 aa15.34■□□□□ 0.05
TNFAIP3-201ENST00000237289 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
TNFAIP3-201ENST00000237289 NUTM2FA1L443 756 aa15.33■□□□□ 0.05
TNFAIP3-201ENST00000237289 ATF3P18847 181 aa15.33■□□□□ 0.04
TNFAIP3-201ENST00000237289 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
TNFAIP3-201ENST00000237289 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
TNFAIP3-201ENST00000237289 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
TNFAIP3-201ENST00000237289 KIF1BO60333 1816 aa15.32■□□□□ 0.04
TNFAIP3-201ENST00000237289 EVC2Q86UK5 1308 aa15.32■□□□□ 0.04
TNFAIP3-201ENST00000237289 ADGRB3O60242 1522 aa15.31■□□□□ 0.04
TNFAIP3-201ENST00000237289 NPHP4O75161 1426 aaPredicted RBP15.31■□□□□ 0.04
TNFAIP3-201ENST00000237289 PLEKHG1Q9ULL1 1385 aa15.3■□□□□ 0.04
TNFAIP3-201ENST00000237289 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
TNFAIP3-201ENST00000237289 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
TNFAIP3-201ENST00000237289 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
TNFAIP3-201ENST00000237289 MROH2AA6NES4 1674 aa15.29■□□□□ 0.04
TNFAIP3-201ENST00000237289 WAPLQ7Z5K2 1190 aa15.29■□□□□ 0.04
TNFAIP3-201ENST00000237289 C3P01024 1663 aa15.28■□□□□ 0.04
TNFAIP3-201ENST00000237289 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
TNFAIP3-201ENST00000237289 SYNMO15061 1565 aa15.28■□□□□ 0.04
TNFAIP3-201ENST00000237289 KCNA6P17658 529 aa15.27■□□□□ 0.04
TNFAIP3-201ENST00000237289 RBM33Q96EV2 1170 aaKnown RBP15.27■□□□□ 0.03
TNFAIP3-201ENST00000237289 LMOD2Q6P5Q4 547 aa15.27■□□□□ 0.03
TNFAIP3-201ENST00000237289 PIK3C2BO00750 1634 aa15.26■□□□□ 0.03
TNFAIP3-201ENST00000237289 NGDNQ8NEJ9 315 aaKnown RBP15.26■□□□□ 0.03
TNFAIP3-201ENST00000237289 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
TNFAIP3-201ENST00000237289 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
TNFAIP3-201ENST00000237289 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
TNFAIP3-201ENST00000237289 ZFYVE9O95405 1425 aa15.24■□□□□ 0.03
TNFAIP3-201ENST00000237289 KNSTRNQ9Y448 316 aa15.23■□□□□ 0.03
TNFAIP3-201ENST00000237289 MYOM2P54296 1465 aa15.23■□□□□ 0.03
TNFAIP3-201ENST00000237289 ANP32CO43423 234 aa15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 YTHDC2Q9H6S0 1430 aaKnown RBP15.22■□□□□ 0.03
TNFAIP3-201ENST00000237289 CDK19Q9BWU1 502 aa15.21■□□□□ 0.03
TNFAIP3-201ENST00000237289 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
TNFAIP3-201ENST00000237289 RALGAPBQ86X10 1494 aa15.2■□□□□ 0.02
TNFAIP3-201ENST00000237289 PIK3C2GO75747 1445 aa15.2■□□□□ 0.02
TNFAIP3-201ENST00000237289 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
TNFAIP3-201ENST00000237289 METP08581 1390 aa15.19■□□□□ 0.02
TNFAIP3-201ENST00000237289 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
TNFAIP3-201ENST00000237289 MSH6P52701 1360 aa15.18■□□□□ 0.02
TNFAIP3-201ENST00000237289 MYO3AQ8NEV4 1616 aa15.18■□□□□ 0.02
TNFAIP3-201ENST00000237289 PIK3R4Q99570 1358 aa15.18■□□□□ 0.02
TNFAIP3-201ENST00000237289 C19orf44Q9H6X5 657 aa15.17■□□□□ 0.02
TNFAIP3-201ENST00000237289 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
TNFAIP3-201ENST00000237289 PSME1Q06323 249 aa15.17■□□□□ 0.02
TNFAIP3-201ENST00000237289 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
TNFAIP3-201ENST00000237289 ZNF335Q9H4Z2 1342 aaPredicted RBP15.16■□□□□ 0.02
TNFAIP3-201ENST00000237289 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
TNFAIP3-201ENST00000237289 NEXMIFQ5QGS0 1516 aa15.15■□□□□ 0.02
TNFAIP3-201ENST00000237289 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
TNFAIP3-201ENST00000237289 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
TNFAIP3-201ENST00000237289 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
TNFAIP3-201ENST00000237289 TOM1O60784 492 aa15.14■□□□□ 0.01
TNFAIP3-201ENST00000237289 PMFBP1Q8TBY8 1022 aa15.14■□□□□ 0.01
TNFAIP3-201ENST00000237289 NUDT16Q96DE0 195 aaKnown RBP15.14■□□□□ 0.01
TNFAIP3-201ENST00000237289 CCDC61Q9Y6R9 512 aa15.14■□□□□ 0.01
TNFAIP3-201ENST00000237289 LMTK3Q96Q04 1460 aa15.13■□□□□ 0.01
TNFAIP3-201ENST00000237289 SLIT1O75093 1534 aa15.13■□□□□ 0.01
TNFAIP3-201ENST00000237289 ARHGAP23Q9P227 1491 aa15.12■□□□□ 0.01
TNFAIP3-201ENST00000237289 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
TNFAIP3-201ENST00000237289 UBAP1LF5GYI3 381 aa15.12■□□□□ 0.01
TNFAIP3-201ENST00000237289 CABP1Q9NZU7 370 aa15.12■□□□□ 0.01
TNFAIP3-201ENST00000237289 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms