RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 NOS1P29475 1434 aa3.58□□□□□ -1.84
PRKD3-201ENST00000234179 PPP1R15AO75807 674 aaPredicted RBP3.57□□□□□ -1.84
PRKD3-201ENST00000234179 NGLY1Q96IV0 654 aa3.57□□□□□ -1.84
PRKD3-201ENST00000234179 MEX3CQ5U5Q3 659 aaKnown RBP3.57□□□□□ -1.84
PRKD3-201ENST00000234179 ALKQ9UM73 1620 aa3.57□□□□□ -1.84
PRKD3-201ENST00000234179 AHDC1Q5TGY3 1603 aaPredicted RBP3.57□□□□□ -1.84
PRKD3-201ENST00000234179 MROH1Q8NDA8 1641 aa3.57□□□□□ -1.84
PRKD3-201ENST00000234179 ATF3P18847 181 aa3.57□□□□□ -1.84
PRKD3-201ENST00000234179 C19orf44Q9H6X5 657 aa3.57□□□□□ -1.84
PRKD3-201ENST00000234179 SLAIN2Q9P270 581 aa3.57□□□□□ -1.84
PRKD3-201ENST00000234179 ADGRL2O95490 1459 aa3.56□□□□□ -1.84
PRKD3-201ENST00000234179 RXRBP28702 533 aa3.56□□□□□ -1.84
PRKD3-201ENST00000234179 ZNF644Q9H582 1327 aaPredicted RBP3.56□□□□□ -1.84
PRKD3-201ENST00000234179 TRPM2O94759 1503 aa3.56□□□□□ -1.84
PRKD3-201ENST00000234179 ATAD2Q6PL18 1390 aa3.56□□□□□ -1.84
PRKD3-201ENST00000234179 LRRC59Q96AG4 307 aaKnown RBP3.55□□□□□ -1.84
PRKD3-201ENST00000234179 RBM6P78332 1123 aaKnown RBP3.55□□□□□ -1.84
PRKD3-201ENST00000234179 BCANQ96GW7 911 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 PTCH1Q13635 1447 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 SETD5Q9C0A6 1442 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 TET3O43151 1660 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 LTKP29376 864 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 C14orf37Q86TY3 774 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 RIMS2Q9UQ26 1411 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 SHPRHQ149N8 1683 aa3.55□□□□□ -1.84
PRKD3-201ENST00000234179 ROBO1Q9Y6N7 1651 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 PIK3C2BO00750 1634 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 POTEAQ6S8J7 498 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 RGS17Q9UGC6 210 aaPredicted RBP3.54□□□□□ -1.84
PRKD3-201ENST00000234179 DAPK1P53355 1430 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 ZFYVE9O95405 1425 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 IDI1Q13907 227 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 UPF1Q92900 1129 aaKnown RBP eCLIP3.54□□□□□ -1.84
PRKD3-201ENST00000234179 PHLPP1O60346 1717 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 ABCC5O15440 1437 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 ROCK1Q13464 1354 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 CEP152O94986 1710 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 PRAG1Q86YV5 1406 aa3.54□□□□□ -1.84
PRKD3-201ENST00000234179 LRPPRCP42704 1394 aaKnown RBP3.53□□□□□ -1.84
PRKD3-201ENST00000234179 C1QBPQ07021 282 aaKnown RBP3.53□□□□□ -1.84
PRKD3-201ENST00000234179 ZRANB1Q9UGI0 708 aa3.53□□□□□ -1.84
PRKD3-201ENST00000234179 COL16A1Q07092 1604 aaPredicted RBP3.53□□□□□ -1.84
PRKD3-201ENST00000234179 CROCC2H7BZ55 1655 aa3.53□□□□□ -1.84
PRKD3-201ENST00000234179 ANKRD50Q9ULJ7 1429 aa3.53□□□□□ -1.84
PRKD3-201ENST00000234179 SLC4A2P04920 1241 aa3.53□□□□□ -1.84
PRKD3-201ENST00000234179 TRPC5Q9UL62 973 aaPredicted RBP3.53□□□□□ -1.84
PRKD3-201ENST00000234179 RPGRIP1LQ68CZ1 1315 aa3.52□□□□□ -1.85
PRKD3-201ENST00000234179 STRCP1A6NGW2 1772 aa3.52□□□□□ -1.85
PRKD3-201ENST00000234179 ADGRL3Q9HAR2 1447 aa3.52□□□□□ -1.85
PRKD3-201ENST00000234179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.52□□□□□ -1.854e-6■□□□□ 8.4
PRKD3-201ENST00000234179 GCC2Q8IWJ2 1684 aa3.52□□□□□ -1.85
PRKD3-201ENST00000234179 SLC26A8Q96RN1 970 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 CHD2O14647 1828 aaKnown RBP3.51□□□□□ -1.85
PRKD3-201ENST00000234179 CNKSR2Q8WXI2 1034 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 SETBP1Q9Y6X0 1596 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 AFF2P51816 1311 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 MAPK8IP2Q13387 824 aaPredicted RBP3.51□□□□□ -1.85
PRKD3-201ENST00000234179 UNC13BO14795 1591 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 HFM1A2PYH4 1435 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 ADAMTS13Q76LX8 1427 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 C11orf95C9JLR9 678 aaPredicted RBP3.51□□□□□ -1.85
PRKD3-201ENST00000234179 XIRP1Q702N8 1843 aaKnown RBP3.51□□□□□ -1.85
PRKD3-201ENST00000234179 SETD1AO15047 1707 aaKnown RBP3.51□□□□□ -1.85
PRKD3-201ENST00000234179 SF3B2Q13435 895 aaKnown RBP3.51□□□□□ -1.85
PRKD3-201ENST00000234179 RRP7BPQ9NSQ0 103 aa3.51□□□□□ -1.85
PRKD3-201ENST00000234179 ASXL1Q8IXJ9 1541 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 IQGAP3Q86VI3 1631 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 PNPLA6Q8IY17 1366 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 NPHP3Q7Z494 1330 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 LAMC1P11047 1609 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 VGFO15240 615 aaPredicted RBP3.5□□□□□ -1.85
PRKD3-201ENST00000234179 BRINP3Q76B58 766 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 EHMT2Q96KQ7 1210 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 MST1RQ04912 1400 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 AMOTL2Q9Y2J4 779 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 TMEM131LA2VDJ0 1609 aa3.5□□□□□ -1.85
PRKD3-201ENST00000234179 QTRT2Q9H974 415 aaKnown RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 EIF3AQ14152 1382 aaKnown RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 NHSL1Q5SYE7 1610 aa3.49□□□□□ -1.85
PRKD3-201ENST00000234179 ZBTB22O15209 634 aa3.49□□□□□ -1.85
PRKD3-201ENST00000234179 LRP6O75581 1613 aa3.49□□□□□ -1.85
PRKD3-201ENST00000234179 FNBP4Q8N3X1 1017 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 NUTM2BA6NNL0 878 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 NUTM2EB1AL46 878 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 NUTM2DQ5VT03 806 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 NUTM2AQ8IVF1 878 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 TRIM52Q96A61 297 aa3.49□□□□□ -1.85
PRKD3-201ENST00000234179 XRN1Q8IZH2 1706 aaKnown RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 SOS2Q07890 1332 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 ATRNO75882 1429 aa3.49□□□□□ -1.85
PRKD3-201ENST00000234179 BLMP54132 1417 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-201ENST00000234179 SIRT1Q96EB6 747 aa3.49□□□□□ -1.85
PRKD3-201ENST00000234179 CHGAP10645 457 aaKnown RBP3.48□□□□□ -1.85
PRKD3-201ENST00000234179 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.48□□□□□ -1.85
PRKD3-201ENST00000234179 PARD3Q8TEW0 1356 aa3.48□□□□□ -1.85
PRKD3-201ENST00000234179 C1orf167Q5SNV9 1468 aa3.48□□□□□ -1.85
PRKD3-201ENST00000234179 PSME1Q06323 249 aa3.48□□□□□ -1.85
PRKD3-201ENST00000234179 RGS12O14924 1447 aa3.48□□□□□ -1.85
PRKD3-201ENST00000234179 CCDC144AA2RUR9 1427 aa3.48□□□□□ -1.85
PRKD3-201ENST00000234179 SPHKAPQ2M3C7 1700 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms