RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 PPLO60437 1756 aa30.64■■■□□ 2.5
GCA-201ENST00000233612 PRKRIP1Q9H875 184 aaPredicted RBP30.64■■■□□ 2.5
GCA-201ENST00000233612 SCAF11Q99590 1463 aaKnown RBP30.64■■■□□ 2.49
GCA-201ENST00000233612 PREX1Q8TCU6 1659 aa30.62■■■□□ 2.49
GCA-201ENST00000233612 ADGRF5Q8IZF2 1346 aa30.61■■■□□ 2.49
GCA-201ENST00000233612 SETBP1Q9Y6X0 1596 aa30.56■■■□□ 2.48
GCA-201ENST00000233612 IDI1Q13907 227 aa30.55■■■□□ 2.48
GCA-201ENST00000233612 PIK3C2GO75747 1445 aa30.53■■■□□ 2.48
GCA-201ENST00000233612 CHGAP10645 457 aaKnown RBP30.53■■■□□ 2.48
GCA-201ENST00000233612 TMF1P82094 1093 aa30.53■■■□□ 2.48
GCA-201ENST00000233612 CFAP70Q5T0N1 1121 aa30.52■■■□□ 2.48
GCA-201ENST00000233612 ZFYVE9O95405 1425 aa30.52■■■□□ 2.48
GCA-201ENST00000233612 ERVK-7P63135 1459 aa30.52■■■□□ 2.48
GCA-201ENST00000233612 SLC24A1O60721 1099 aa30.52■■■□□ 2.48
GCA-201ENST00000233612 EIF3AQ14152 1382 aaKnown RBP30.51■■■□□ 2.48
GCA-201ENST00000233612 C14orf93Q9H972 538 aaKnown RBP30.51■■■□□ 2.47
GCA-201ENST00000233612 POLR3GLQ9BT43 218 aa30.5■■■□□ 2.47
GCA-201ENST00000233612 NEXMIFQ5QGS0 1516 aa30.5■■■□□ 2.47
GCA-201ENST00000233612 CLTCQ00610 1675 aaKnown RBP30.49■■■□□ 2.47
GCA-201ENST00000233612 DISP3Q9P2K9 1392 aa30.49■■■□□ 2.47
GCA-201ENST00000233612 TMEM131LA2VDJ0 1609 aa30.48■■■□□ 2.47
GCA-201ENST00000233612 VGFO15240 615 aaPredicted RBP30.48■■■□□ 2.47
GCA-201ENST00000233612 SCAF1Q9H7N4 1312 aaKnown RBP30.48■■■□□ 2.47
GCA-201ENST00000233612 SPATA31D1Q6ZQQ2 1576 aa30.46■■■□□ 2.47
GCA-201ENST00000233612 KTN1Q86UP2 1357 aaKnown RBP30.45■■■□□ 2.47
GCA-201ENST00000233612 CDCA8Q53HL2 280 aa30.42■■■□□ 2.46
GCA-201ENST00000233612 MYO3AQ8NEV4 1616 aa30.42■■■□□ 2.46
GCA-201ENST00000233612 FBXO31Q5XUX0 539 aaPredicted RBP30.42■■■□□ 2.46
GCA-201ENST00000233612 ADGRB1O14514 1584 aa30.42■■■□□ 2.46
GCA-201ENST00000233612 SBNO2Q9Y2G9 1366 aa30.4■■■□□ 2.46
GCA-201ENST00000233612 PER1O15534 1290 aaPredicted RBP30.39■■■□□ 2.45
GCA-201ENST00000233612 MYO5BQ9ULV0 1848 aa30.38■■■□□ 2.45
GCA-201ENST00000233612 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
GCA-201ENST00000233612 RALBP1Q15311 655 aa30.33■■■□□ 2.45
GCA-201ENST00000233612 CCDC184Q52MB2 194 aa30.33■■■□□ 2.45
GCA-201ENST00000233612 MLECQ14165 292 aa30.33■■■□□ 2.45
GCA-201ENST00000233612 GTF3C3Q9Y5Q9 886 aa30.31■■■□□ 2.44
GCA-201ENST00000233612 ESF1Q9H501 851 aaKnown RBP30.3■■■□□ 2.44
GCA-201ENST00000233612 MRS2Q9HD23 443 aa30.3■■■□□ 2.44
GCA-201ENST00000233612 A2ML1A8K2U0 1454 aa30.27■■■□□ 2.44
GCA-201ENST00000233612 PANK3Q9H999 370 aa30.27■■■□□ 2.44
GCA-201ENST00000233612 CENPJQ9HC77 1338 aaPredicted RBP30.26■■■□□ 2.43
GCA-201ENST00000233612 KDM5AP29375 1690 aaKnown RBP30.26■■■□□ 2.43
GCA-201ENST00000233612 PARD3Q8TEW0 1356 aa30.25■■■□□ 2.43
GCA-201ENST00000233612 MYBBP1AQ9BQG0 1328 aaKnown RBP30.22■■■□□ 2.43
GCA-201ENST00000233612 TRHP20396 242 aaPredicted RBP30.2■■■□□ 2.43
GCA-201ENST00000233612 TMEM132EQ6IEE7 984 aa30.2■■■□□ 2.43
GCA-201ENST00000233612 MYOM1P52179 1685 aa30.2■■■□□ 2.42
GCA-201ENST00000233612 STAG3Q9UJ98 1225 aa30.2■■■□□ 2.42
GCA-201ENST00000233612 BRD4O60885 1362 aaPredicted RBP30.2■■■□□ 2.42
GCA-201ENST00000233612 NUTM2DQ5VT03 806 aaPredicted RBP30.19■■■□□ 2.42
GCA-201ENST00000233612 TRAK1Q9UPV9 953 aa30.19■■■□□ 2.42
GCA-201ENST00000233612 PUS7Q96PZ0 661 aaKnown RBP30.18■■■□□ 2.42
GCA-201ENST00000233612 QRICH2Q9H0J4 1663 aa30.17■■■□□ 2.42
GCA-201ENST00000233612 ARHGEF28Q8N1W1 1705 aaKnown RBP30.17■■■□□ 2.42
GCA-201ENST00000233612 ASXL1Q8IXJ9 1541 aa30.15■■■□□ 2.42
GCA-201ENST00000233612 TNRQ92752 1358 aa30.14■■■□□ 2.42
GCA-201ENST00000233612 NPC1L1Q9UHC9 1359 aa30.13■■■□□ 2.41
GCA-201ENST00000233612 ALKQ9UM73 1620 aa30.13■■■□□ 2.41
GCA-201ENST00000233612 RIMS2Q9UQ26 1411 aa30.13■■■□□ 2.41
GCA-201ENST00000233612 DNAJC5Q9H3Z4 198 aa30.13■■■□□ 2.41
GCA-201ENST00000233612 HNRNPUQ00839 825 aaKnown RBP eCLIP30.11■■■□□ 2.41
GCA-201ENST00000233612 FAM9BQ8IZU0 186 aa30.11■■■□□ 2.41
GCA-201ENST00000233612 PNISRQ8TF01 805 aaKnown RBP30.11■■■□□ 2.41
GCA-201ENST00000233612 NLRP13Q86W25 1043 aa30.11■■■□□ 2.41
GCA-201ENST00000233612 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.11■■■□□ 2.41
GCA-201ENST00000233612 TMC1Q8TDI8 760 aa30.09■■■□□ 2.41
GCA-201ENST00000233612 KNSTRNQ9Y448 316 aa30.08■■■□□ 2.41
GCA-201ENST00000233612 HDGFP51858 240 aaKnown RBP30.07■■■□□ 2.4
GCA-201ENST00000233612 AMER1Q5JTC6 1135 aaPredicted RBP30.07■■■□□ 2.4
GCA-201ENST00000233612 YTHDC2Q9H6S0 1430 aaKnown RBP30.06■■■□□ 2.4
GCA-201ENST00000233612 CNGB1Q14028 1251 aaPredicted RBP30.04■■■□□ 2.4
GCA-201ENST00000233612 NLRP1Q9C000 1473 aa30.04■■■□□ 2.4
GCA-201ENST00000233612 LRPPRCP42704 1394 aaKnown RBP30.04■■■□□ 2.4
GCA-201ENST00000233612 SETD1AO15047 1707 aaKnown RBP30.04■■■□□ 2.4
GCA-201ENST00000233612 UBR1Q8IWV7 1749 aa30.03■■■□□ 2.4
GCA-201ENST00000233612 PTPRMP28827 1452 aa30.03■■■□□ 2.4
GCA-201ENST00000233612 EVC2Q86UK5 1308 aa30.02■■■□□ 2.4
GCA-201ENST00000233612 CC2D1BQ5T0F9 858 aaKnown RBP30.01■■■□□ 2.4
GCA-201ENST00000233612 ZBED9Q6R2W3 1325 aa30.01■■■□□ 2.39
GCA-201ENST00000233612 DLC1Q96QB1 1528 aa30■■■□□ 2.39
GCA-201ENST00000233612 C3P01024 1663 aa29.98■■■□□ 2.39
GCA-201ENST00000233612 NRXN3Q9Y4C0 1643 aa29.98■■■□□ 2.39
GCA-201ENST00000233612 TULP4Q9NRJ4 1543 aa29.98■■■□□ 2.39
GCA-201ENST00000233612 FER1L4A9Z1Z3 1794 aa29.98■■■□□ 2.39
GCA-201ENST00000233612 TMEM2Q9UHN6 1383 aa29.97■■■□□ 2.39
GCA-201ENST00000233612 INSRP06213 1382 aa29.96■■■□□ 2.39
GCA-201ENST00000233612 ABCC11Q96J66 1382 aa29.94■■■□□ 2.38
GCA-201ENST00000233612 CARD14Q9BXL6 1004 aa29.94■■■□□ 2.38
GCA-201ENST00000233612 STK26Q9P289 416 aa29.93■■■□□ 2.38
GCA-201ENST00000233612 NINLQ9Y2I6 1382 aa29.91■■■□□ 2.38
GCA-201ENST00000233612 SIRT1Q96EB6 747 aa29.9■■■□□ 2.38
GCA-201ENST00000233612 PRAM1Q96QH2 718 aa29.89■■■□□ 2.38
GCA-201ENST00000233612 PPP2R1AP30153 589 aa29.88■■■□□ 2.37
GCA-201ENST00000233612 CEBPAP49715 358 aaPredicted RBP29.88■■■□□ 2.37
GCA-201ENST00000233612 SLC12A5Q9H2X9 1139 aa29.87■■■□□ 2.37
GCA-201ENST00000233612 POGKQ9P215 609 aa29.87■■■□□ 2.37
GCA-201ENST00000233612 USP32Q8NFA0 1604 aa29.87■■■□□ 2.37
GCA-201ENST00000233612 SLIT1O75093 1534 aa29.84■■■□□ 2.37
GCA-201ENST00000233612 TECPR2O15040 1411 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms