RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 CCDC73Q6ZRK6 1079 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 NINLQ9Y2I6 1382 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 PANK3Q9H999 370 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 RRP12Q5JTH9 1297 aaKnown RBP9.97□□□□□ -0.81
APOB-201ENST00000233242 PDCL2Q8N4E4 241 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 CCDC88BA6NC98 1476 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 COG6Q9Y2V7 657 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
APOB-201ENST00000233242 BICD2Q8TD16 824 aa9.97□□□□□ -0.81
APOB-201ENST00000233242 LEKR1Q6ZMV7 388 aa9.96□□□□□ -0.81
APOB-201ENST00000233242 MCTP1Q6DN14 999 aa9.96□□□□□ -0.81
APOB-201ENST00000233242 ESPNB1AK53 854 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 CDC45O75419 566 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 EIF4G1Q04637 1599 aaKnown RBP9.96□□□□□ -0.82
APOB-201ENST00000233242 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 RABEP1Q15276 862 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 TSPY26PQ9H489 355 aa9.96□□□□□ -0.82
APOB-201ENST00000233242 H0YHG0 523 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
APOB-201ENST00000233242 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 CWC22Q9HCG8 908 aaKnown RBP9.95□□□□□ -0.82
APOB-201ENST00000233242 SMC3Q9UQE7 1217 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 USP8P40818 1118 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
APOB-201ENST00000233242 CCDC144AA2RUR9 1427 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 PDCP20941 246 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 CREBRFQ8IUR6 639 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 CCDC47Q96A33 483 aaKnown RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 PES1O00541 588 aaKnown RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 CARMIL2Q6F5E8 1435 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 AKAP17AQ02040 695 aaKnown RBP9.94□□□□□ -0.82
APOB-201ENST00000233242 RILPL2Q969X0 211 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 MIA2Q96PC5 1412 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
APOB-201ENST00000233242 SENP3Q9H4L4 574 aaPredicted RBP9.93□□□□□ -0.82
APOB-201ENST00000233242 GRPEL1Q9HAV7 217 aa9.93□□□□□ -0.82
APOB-201ENST00000233242 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
APOB-201ENST00000233242 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
APOB-201ENST00000233242 TRIM29Q14134 588 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 SYNE3Q6ZMZ3 975 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 MYO6Q9UM54 1294 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 PDE3AQ14432 1141 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 TRIM5Q9C035 493 aa9.92□□□□□ -0.82
APOB-201ENST00000233242 CPLX1O14810 134 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 PDIA4P13667 645 aaKnown RBP9.91□□□□□ -0.82
APOB-201ENST00000233242 CCDC112Q8NEF3 446 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 WASHC2CQ9Y4E1 1318 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 ANO2Q9NQ90 1003 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 ZSCAN30Q86W11 494 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 ERC2O15083 957 aa9.91□□□□□ -0.82
APOB-201ENST00000233242 TAF7LQ5H9L4 462 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 UQCRHLA0A096LP55 91 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 UQCRHP07919 91 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 UBE2Q2Q8WVN8 375 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 KIF2AO00139 706 aaPredicted RBP9.9□□□□□ -0.82
APOB-201ENST00000233242 APAF1O14727 1248 aa9.9□□□□□ -0.82
APOB-201ENST00000233242 VPS37CA5D8V6 355 aaPredicted RBP9.9□□□□□ -0.82
APOB-201ENST00000233242 RUNDC1Q96C34 613 aa9.9□□□□□ -0.83
APOB-201ENST00000233242 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 ERLIN1O75477 346 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 SAFB2Q14151 953 aaKnown RBP eCLIP9.89□□□□□ -0.83
APOB-201ENST00000233242 EIF3JO75822 258 aaKnown RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 FOXD4L6Q3SYB3 417 aaPredicted RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 FOXD4L3Q6VB84 417 aaPredicted RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 DEF6Q9H4E7 631 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 PSMA5P28066 241 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 CCDC192P0DO97 292 aa9.89□□□□□ -0.83
APOB-201ENST00000233242 CT47B1P0C2W7 299 aaPredicted RBP9.89□□□□□ -0.83
APOB-201ENST00000233242 SMARCA2P51531 1590 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 RRP7AQ9Y3A4 280 aaKnown RBP9.88□□□□□ -0.83
APOB-201ENST00000233242 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
APOB-201ENST00000233242 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 KINO60870 393 aaKnown RBP9.88□□□□□ -0.83
APOB-201ENST00000233242 MCM5P33992 734 aa9.88□□□□□ -0.83
APOB-201ENST00000233242 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
APOB-201ENST00000233242 SAFBQ15424 915 aaKnown RBP eCLIP9.87□□□□□ -0.83
APOB-201ENST00000233242 STK26Q9P289 416 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 MARCH6O60337 910 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 MCM4P33991 863 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 RNF214Q8ND24 703 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms