RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CFAP65Q6ZU64 1925 aaKnown RBP40.61■■■■■ 4.09
PABPN1-201ENST00000216727 SIGLEC1Q9BZZ2 1709 aa40.61■■■■■ 4.09
PABPN1-201ENST00000216727 ADGRF5Q8IZF2 1346 aa40.61■■■■■ 4.09
PABPN1-201ENST00000216727 PIK3C2BO00750 1634 aa40.59■■■■■ 4.09
PABPN1-201ENST00000216727 EIF3AQ14152 1382 aaKnown RBP40.59■■■■■ 4.09
PABPN1-201ENST00000216727 REREQ9P2R6 1566 aa40.58■■■■■ 4.09
PABPN1-201ENST00000216727 RPGRIP1LQ68CZ1 1315 aa40.56■■■■■ 4.08
PABPN1-201ENST00000216727 RALBP1Q15311 655 aa40.56■■■■■ 4.08
PABPN1-201ENST00000216727 PPLO60437 1756 aa40.55■■■■■ 4.08
PABPN1-201ENST00000216727 SYNMO15061 1565 aa40.55■■■■■ 4.08
PABPN1-201ENST00000216727 FAM9BQ8IZU0 186 aa40.54■■■■■ 4.08
PABPN1-201ENST00000216727 PER1O15534 1290 aaPredicted RBP40.52■■■■■ 4.08
PABPN1-201ENST00000216727 CFAP70Q5T0N1 1121 aa40.52■■■■■ 4.08
PABPN1-201ENST00000216727 CHGAP10645 457 aaKnown RBP40.5■■■■■ 4.07
PABPN1-201ENST00000216727 KIF13AQ9H1H9 1805 aa40.49■■■■■ 4.07
PABPN1-201ENST00000216727 AGLP35573 1532 aa40.49■■■■■ 4.07
PABPN1-201ENST00000216727 SETBP1Q9Y6X0 1596 aa40.49■■■■■ 4.07
PABPN1-201ENST00000216727 CDCA8Q53HL2 280 aa40.49■■■■■ 4.07
PABPN1-201ENST00000216727 SUPT16HQ9Y5B9 1047 aaKnown RBP40.47■■■■■ 4.07
PABPN1-201ENST00000216727 PIK3C2GO75747 1445 aa40.47■■■■■ 4.07
PABPN1-201ENST00000216727 SLC24A1O60721 1099 aa40.46■■■■■ 4.07
PABPN1-201ENST00000216727 MYBBP1AQ9BQG0 1328 aaKnown RBP40.46■■■■■ 4.07
PABPN1-201ENST00000216727 PARD3Q8TEW0 1356 aa40.44■■■■■ 4.06
PABPN1-201ENST00000216727 CNGB1Q14028 1251 aaPredicted RBP40.43■■■■■ 4.06
PABPN1-201ENST00000216727 BRD4O60885 1362 aaPredicted RBP40.42■■■■■ 4.06
PABPN1-201ENST00000216727 SLC52A1Q9NWF4 448 aa40.42■■■■■ 4.06
PABPN1-201ENST00000216727 PPP6R1Q9UPN7 881 aa40.41■■■■■ 4.06
PABPN1-201ENST00000216727 PANK3Q9H999 370 aa40.4■■■■■ 4.06
PABPN1-201ENST00000216727 PREX1Q8TCU6 1659 aa40.39■■■■■ 4.06
PABPN1-201ENST00000216727 ZBED9Q6R2W3 1325 aa40.38■■■■■ 4.05
PABPN1-201ENST00000216727 C14orf93Q9H972 538 aaKnown RBP40.38■■■■■ 4.05
PABPN1-201ENST00000216727 MYO3AQ8NEV4 1616 aa40.37■■■■■ 4.05
PABPN1-201ENST00000216727 TMC1Q8TDI8 760 aa40.36■■■■■ 4.05
PABPN1-201ENST00000216727 NEXMIFQ5QGS0 1516 aa40.35■■■■■ 4.05
PABPN1-201ENST00000216727 PNISRQ8TF01 805 aaKnown RBP40.35■■■■■ 4.05
PABPN1-201ENST00000216727 SBNO2Q9Y2G9 1366 aa40.33■■■■■ 4.05
PABPN1-201ENST00000216727 IDI1Q13907 227 aa40.33■■■■■ 4.05
PABPN1-201ENST00000216727 ADGRB1O14514 1584 aa40.31■■■■■ 4.04
PABPN1-201ENST00000216727 VGFO15240 615 aaPredicted RBP40.3■■■■■ 4.04
PABPN1-201ENST00000216727 NLRP13Q86W25 1043 aa40.29■■■■■ 4.04
PABPN1-201ENST00000216727 ARHGEF40Q8TER5 1519 aa40.29■■■■■ 4.04
PABPN1-201ENST00000216727 KDM5AP29375 1690 aaKnown RBP40.28■■■■■ 4.04
PABPN1-201ENST00000216727 ZFYVE9O95405 1425 aa40.28■■■■■ 4.04
PABPN1-201ENST00000216727 ERVK-7P63135 1459 aa40.25■■■■■ 4.03
PABPN1-201ENST00000216727 LRPPRCP42704 1394 aaKnown RBP40.25■■■■■ 4.03
PABPN1-201ENST00000216727 MYOM1P52179 1685 aa40.24■■■■■ 4.03
PABPN1-201ENST00000216727 TMEM131LA2VDJ0 1609 aa40.23■■■■■ 4.03
PABPN1-201ENST00000216727 NEFLP07196 543 aa40.2■■■■■ 4.03
PABPN1-201ENST00000216727 CENPJQ9HC77 1338 aaPredicted RBP40.19■■■■■ 4.02
PABPN1-201ENST00000216727 CC2D1BQ5T0F9 858 aaKnown RBP40.16■■■■■ 4.02
PABPN1-201ENST00000216727 CLTCQ00610 1675 aaKnown RBP40.16■■■■■ 4.02
PABPN1-201ENST00000216727 FKBP8Q14318 412 aa40.16■■■■■ 4.02
PABPN1-201ENST00000216727 KNSTRNQ9Y448 316 aa40.16■■■■■ 4.02
PABPN1-201ENST00000216727 FBXO31Q5XUX0 539 aaPredicted RBP40.14■■■■■ 4.02
PABPN1-201ENST00000216727 MYO5BQ9ULV0 1848 aa40.14■■■■■ 4.02
PABPN1-201ENST00000216727 NPC1L1Q9UHC9 1359 aa40.11■■■■■ 4.01
PABPN1-201ENST00000216727 TRAK1Q9UPV9 953 aa40.11■■■■■ 4.01
PABPN1-201ENST00000216727 SPATA31D1Q6ZQQ2 1576 aa40.1■■■■■ 4.01
PABPN1-201ENST00000216727 AMER1Q5JTC6 1135 aaPredicted RBP40.09■■■■■ 4.01
PABPN1-201ENST00000216727 ASXL1Q8IXJ9 1541 aa40.09■■■■■ 4.01
PABPN1-201ENST00000216727 TMEM132EQ6IEE7 984 aa40.09■■■■■ 4.01
PABPN1-201ENST00000216727 QRICH2Q9H0J4 1663 aa40.09■■■■■ 4.01
PABPN1-201ENST00000216727 NUTM2DQ5VT03 806 aaPredicted RBP40.06■■■■■ 4
PABPN1-201ENST00000216727 INSRP06213 1382 aa40.03■■■■■ 4
PABPN1-201ENST00000216727 ARHGEF28Q8N1W1 1705 aaKnown RBP40.01■■■■■ 4
PABPN1-201ENST00000216727 SMG6Q86US8 1419 aaKnown RBP39.96■■■■□ 3.99
PABPN1-201ENST00000216727 MLECQ14165 292 aa39.96■■■■□ 3.99
PABPN1-201ENST00000216727 PUS7Q96PZ0 661 aaKnown RBP39.95■■■■□ 3.99
PABPN1-201ENST00000216727 STAG3Q9UJ98 1225 aa39.92■■■■□ 3.98
PABPN1-201ENST00000216727 A2ML1A8K2U0 1454 aa39.92■■■■□ 3.98
PABPN1-201ENST00000216727 PPP2R1AP30153 589 aa39.91■■■■□ 3.98
PABPN1-201ENST00000216727 ZMYM3Q14202 1370 aa39.88■■■■□ 3.97
PABPN1-201ENST00000216727 PELP1Q8IZL8 1130 aaKnown RBP39.87■■■■□ 3.97
PABPN1-201ENST00000216727 CARD14Q9BXL6 1004 aa39.87■■■■□ 3.97
PABPN1-201ENST00000216727 ESF1Q9H501 851 aaKnown RBP39.87■■■■□ 3.97
PABPN1-201ENST00000216727 NUDCQ9Y266 331 aa39.86■■■■□ 3.97
PABPN1-201ENST00000216727 BLMP54132 1417 aaPredicted RBP39.85■■■■□ 3.97
PABPN1-201ENST00000216727 EVC2Q86UK5 1308 aa39.84■■■■□ 3.97
PABPN1-201ENST00000216727 ALKQ9UM73 1620 aa39.84■■■■□ 3.97
PABPN1-201ENST00000216727 BCANQ96GW7 911 aa39.83■■■■□ 3.97
PABPN1-201ENST00000216727 TULP4Q9NRJ4 1543 aa39.83■■■■□ 3.97
PABPN1-201ENST00000216727 YTHDC2Q9H6S0 1430 aaKnown RBP39.8■■■■□ 3.96
PABPN1-201ENST00000216727 ERICH6BQ5W0A0 696 aa39.8■■■■□ 3.96
PABPN1-201ENST00000216727 PTPRMP28827 1452 aa39.79■■■■□ 3.96
PABPN1-201ENST00000216727 RIMS2Q9UQ26 1411 aa39.78■■■■□ 3.96
PABPN1-201ENST00000216727 SLC12A5Q9H2X9 1139 aa39.74■■■■□ 3.95
PABPN1-201ENST00000216727 STK26Q9P289 416 aa39.72■■■■□ 3.95
PABPN1-201ENST00000216727 USP32Q8NFA0 1604 aa39.72■■■■□ 3.95
PABPN1-201ENST00000216727 NSD3Q9BZ95 1437 aa39.71■■■■□ 3.95
PABPN1-201ENST00000216727 PDE3BQ13370 1112 aa39.7■■■■□ 3.95
PABPN1-201ENST00000216727 TNRQ92752 1358 aa39.67■■■■□ 3.94
PABPN1-201ENST00000216727 NINLQ9Y2I6 1382 aa39.67■■■■□ 3.94
PABPN1-201ENST00000216727 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.67■■■■□ 3.94
PABPN1-201ENST00000216727 SETD1AO15047 1707 aaKnown RBP39.66■■■■□ 3.94
PABPN1-201ENST00000216727 ANKRD36BQ8N2N9 1353 aa39.65■■■■□ 3.94
PABPN1-201ENST00000216727 SENP3-EIF4A1A0A087X0R7 540 aa39.65■■■■□ 3.94
PABPN1-201ENST00000216727 ADAMTS8Q9UP79 889 aa39.65■■■■□ 3.94
PABPN1-201ENST00000216727 DLC1Q96QB1 1528 aa39.64■■■■□ 3.94
PABPN1-201ENST00000216727 WDR43Q15061 677 aaKnown RBP eCLIP39.64■■■■□ 3.944e-6■■■□□ 16.5
PABPN1-201ENST00000216727 PRAM1Q96QH2 718 aa39.64■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms