RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 HDGFP51858 240 aaKnown RBP25.93■■□□□ 1.74
MRPL28-201ENST00000199706 ZNF335Q9H4Z2 1342 aaPredicted RBP25.91■■□□□ 1.74
MRPL28-201ENST00000199706 MPHOSPH9Q99550 1183 aa25.91■■□□□ 1.74
MRPL28-201ENST00000199706 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.9■■□□□ 1.74
MRPL28-201ENST00000199706 PLEKHG1Q9ULL1 1385 aa25.9■■□□□ 1.74
MRPL28-201ENST00000199706 DIP2AQ14689 1571 aa25.86■■□□□ 1.73
MRPL28-201ENST00000199706 FBXO41Q8TF61 875 aa25.86■■□□□ 1.73
MRPL28-201ENST00000199706 CCDC144AA2RUR9 1427 aa25.83■■□□□ 1.73
MRPL28-201ENST00000199706 STRCP1A6NGW2 1772 aa25.83■■□□□ 1.73
MRPL28-201ENST00000199706 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
MRPL28-201ENST00000199706 NEXMIFQ5QGS0 1516 aa25.83■■□□□ 1.72
MRPL28-201ENST00000199706 NWD1Q149M9 1564 aa25.82■■□□□ 1.72
MRPL28-201ENST00000199706 SETBP1Q9Y6X0 1596 aa25.81■■□□□ 1.72
MRPL28-201ENST00000199706 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
MRPL28-201ENST00000199706 RPGRIP1LQ68CZ1 1315 aa25.77■■□□□ 1.72
MRPL28-201ENST00000199706 PIK3R4Q99570 1358 aa25.76■■□□□ 1.71
MRPL28-201ENST00000199706 SPATA31E1Q6ZUB1 1445 aa25.76■■□□□ 1.71
MRPL28-201ENST00000199706 ADAMTS13Q76LX8 1427 aa25.76■■□□□ 1.71
MRPL28-201ENST00000199706 NKTRP30414 1462 aaKnown RBP25.76■■□□□ 1.71
MRPL28-201ENST00000199706 PPLO60437 1756 aa25.76■■□□□ 1.71
MRPL28-201ENST00000199706 NRXN3Q9Y4C0 1643 aa25.75■■□□□ 1.71
MRPL28-201ENST00000199706 FOXD1Q16676 465 aa25.75■■□□□ 1.71
MRPL28-201ENST00000199706 ILDR1Q86SU0 546 aaPredicted RBP25.75■■□□□ 1.71
MRPL28-201ENST00000199706 LRRC7Q96NW7 1537 aa25.74■■□□□ 1.71
MRPL28-201ENST00000199706 TBX22Q9Y458 520 aa25.74■■□□□ 1.71
MRPL28-201ENST00000199706 CHD2O14647 1828 aaKnown RBP25.74■■□□□ 1.71
MRPL28-201ENST00000199706 ZNF326Q5BKZ1 582 aaKnown RBP25.72■■□□□ 1.71
MRPL28-201ENST00000199706 IFT172Q9UG01 1749 aa25.71■■□□□ 1.71
MRPL28-201ENST00000199706 KCNA6P17658 529 aa25.7■■□□□ 1.7
MRPL28-201ENST00000199706 SLC26A8Q96RN1 970 aa25.7■■□□□ 1.7
MRPL28-201ENST00000199706 ANKRD30BQ9BXX2 1392 aa25.69■■□□□ 1.7
MRPL28-201ENST00000199706 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
MRPL28-201ENST00000199706 XIRP1Q702N8 1843 aaKnown RBP25.66■■□□□ 1.7
MRPL28-201ENST00000199706 BCANQ96GW7 911 aa25.66■■□□□ 1.7
MRPL28-201ENST00000199706 SETD1AO15047 1707 aaKnown RBP25.63■■□□□ 1.69
MRPL28-201ENST00000199706 XRN1Q8IZH2 1706 aaKnown RBP25.63■■□□□ 1.69
MRPL28-201ENST00000199706 NUTM2DQ5VT03 806 aaPredicted RBP25.63■■□□□ 1.69
MRPL28-201ENST00000199706 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
MRPL28-201ENST00000199706 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
MRPL28-201ENST00000199706 PRAG1Q86YV5 1406 aa25.6■■□□□ 1.69
MRPL28-201ENST00000199706 MYOM2P54296 1465 aa25.6■■□□□ 1.69
MRPL28-201ENST00000199706 ALKQ9UM73 1620 aa25.57■■□□□ 1.68
MRPL28-201ENST00000199706 TMEM94Q12767 1356 aa25.56■■□□□ 1.68
MRPL28-201ENST00000199706 NRXN1Q9ULB1 1477 aa25.56■■□□□ 1.68
MRPL28-201ENST00000199706 TOM1O60784 492 aa25.55■■□□□ 1.68
MRPL28-201ENST00000199706 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
MRPL28-201ENST00000199706 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
MRPL28-201ENST00000199706 UBAP1LF5GYI3 381 aa25.54■■□□□ 1.68
MRPL28-201ENST00000199706 METP08581 1390 aa25.54■■□□□ 1.68
MRPL28-201ENST00000199706 LAMC1P11047 1609 aa25.52■■□□□ 1.68
MRPL28-201ENST00000199706 PROSER2Q86WR7 435 aaPredicted RBP25.51■■□□□ 1.67
MRPL28-201ENST00000199706 STAC3Q96MF2 364 aa25.51■■□□□ 1.67
MRPL28-201ENST00000199706 PTCH1Q13635 1447 aa25.5■■□□□ 1.67
MRPL28-201ENST00000199706 RGL3Q3MIN7 710 aa25.5■■□□□ 1.67
MRPL28-201ENST00000199706 ADGRF5Q8IZF2 1346 aa25.48■■□□□ 1.67
MRPL28-201ENST00000199706 AMOTL2Q9Y2J4 779 aa25.48■■□□□ 1.67
MRPL28-201ENST00000199706 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
MRPL28-201ENST00000199706 MSH6P52701 1360 aa25.46■■□□□ 1.67
MRPL28-201ENST00000199706 DCCP43146 1447 aa25.45■■□□□ 1.66
MRPL28-201ENST00000199706 TECPR2O15040 1411 aa25.44■■□□□ 1.66
MRPL28-201ENST00000199706 KNDC1Q76NI1 1749 aa25.43■■□□□ 1.66
MRPL28-201ENST00000199706 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
MRPL28-201ENST00000199706 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.4■■□□□ 1.66
MRPL28-201ENST00000199706 DHX57Q6P158 1386 aaKnown RBP25.4■■□□□ 1.66
MRPL28-201ENST00000199706 FAM135BQ49AJ0 1406 aa25.38■■□□□ 1.65
MRPL28-201ENST00000199706 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
MRPL28-201ENST00000199706 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
MRPL28-201ENST00000199706 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
MRPL28-201ENST00000199706 LRPPRCP42704 1394 aaKnown RBP25.37■■□□□ 1.65
MRPL28-201ENST00000199706 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
MRPL28-201ENST00000199706 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
MRPL28-201ENST00000199706 ROBO2Q9HCK4 1378 aa25.34■■□□□ 1.65
MRPL28-201ENST00000199706 CADPS2Q86UW7 1296 aa25.34■■□□□ 1.65
MRPL28-201ENST00000199706 RBM33Q96EV2 1170 aaKnown RBP25.33■■□□□ 1.65
MRPL28-201ENST00000199706 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
MRPL28-201ENST00000199706 ADGRB1O14514 1584 aa25.32■■□□□ 1.64
MRPL28-201ENST00000199706 YTHDC2Q9H6S0 1430 aaKnown RBP25.32■■□□□ 1.64
MRPL28-201ENST00000199706 PIP4K2BP78356 416 aa25.32■■□□□ 1.64
MRPL28-201ENST00000199706 DCAF11Q8TEB1 546 aa25.31■■□□□ 1.64
MRPL28-201ENST00000199706 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
MRPL28-201ENST00000199706 C14orf37Q86TY3 774 aa25.3■■□□□ 1.64
MRPL28-201ENST00000199706 DLC1Q96QB1 1528 aa25.29■■□□□ 1.64
MRPL28-201ENST00000199706 SIRT1Q96EB6 747 aa25.29■■□□□ 1.64
MRPL28-201ENST00000199706 SCAF1Q9H7N4 1312 aaKnown RBP25.29■■□□□ 1.64
MRPL28-201ENST00000199706 ATF3P18847 181 aa25.28■■□□□ 1.64
MRPL28-201ENST00000199706 SLAIN2Q9P270 581 aa25.28■■□□□ 1.64
MRPL28-201ENST00000199706 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
MRPL28-201ENST00000199706 CFAP70Q5T0N1 1121 aa25.26■■□□□ 1.63
MRPL28-201ENST00000199706 MST1RQ04912 1400 aa25.24■■□□□ 1.63
MRPL28-201ENST00000199706 HSPA1LP34931 641 aa25.23■■□□□ 1.63
MRPL28-201ENST00000199706 TMEM132EQ6IEE7 984 aa25.22■■□□□ 1.63
MRPL28-201ENST00000199706 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.62
MRPL28-201ENST00000199706 KDM2AQ9Y2K7 1162 aa25.2■■□□□ 1.62
MRPL28-201ENST00000199706 STK26Q9P289 416 aa25.17■■□□□ 1.62
MRPL28-201ENST00000199706 ADGRB2O60241 1585 aa25.16■■□□□ 1.62
MRPL28-201ENST00000199706 SIN3AQ96ST3 1273 aa25.16■■□□□ 1.62
MRPL28-201ENST00000199706 L3MBTL2Q969R5 705 aa25.15■■□□□ 1.62
MRPL28-201ENST00000199706 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
MRPL28-201ENST00000199706 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
MRPL28-201ENST00000199706 ARHGEF28Q8N1W1 1705 aaKnown RBP25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms