RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 KIF21BO75037 1637 aa23.27■■□□□ 1.32
MBD3-201ENST00000156825 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
MBD3-201ENST00000156825 PANK1Q8TE04 598 aa23.26■■□□□ 1.31
MBD3-201ENST00000156825 NEXNQ0ZGT2 675 aa23.26■■□□□ 1.31
MBD3-201ENST00000156825 MSH5O43196 834 aa23.26■■□□□ 1.31
MBD3-201ENST00000156825 SF3A1Q15459 793 aaKnown RBP23.26■■□□□ 1.31
MBD3-201ENST00000156825 NBPF1Q3BBV0 1214 aa23.26■■□□□ 1.31
MBD3-201ENST00000156825 ADAMTS8Q9UP79 889 aa23.25■■□□□ 1.31
MBD3-201ENST00000156825 PTMSP20962 102 aa23.25■■□□□ 1.31
MBD3-201ENST00000156825 RUNDC1Q96C34 613 aa23.25■■□□□ 1.31
MBD3-201ENST00000156825 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.25■■□□□ 1.31
MBD3-201ENST00000156825 LRRC9Q6ZRR7 1453 aa23.25■■□□□ 1.31
MBD3-201ENST00000156825 LNPKQ9C0E8 428 aa23.24■■□□□ 1.31
MBD3-201ENST00000156825 DDX19BQ9UMR2 479 aa23.24■■□□□ 1.31
MBD3-201ENST00000156825 CDCA7LQ96GN5 454 aa23.24■■□□□ 1.31
MBD3-201ENST00000156825 DIAPH3Q9NSV4 1193 aa23.24■■□□□ 1.31
MBD3-201ENST00000156825 MTHFSP49914 203 aa23.23■■□□□ 1.31
MBD3-201ENST00000156825 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
MBD3-201ENST00000156825 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
MBD3-201ENST00000156825 PDE4CQ08493 712 aa23.22■■□□□ 1.31
MBD3-201ENST00000156825 NCOA2Q15596 1464 aa23.22■■□□□ 1.31
MBD3-201ENST00000156825 DDX49Q9Y6V7 483 aaKnown RBP23.21■■□□□ 1.31
MBD3-201ENST00000156825 AIMP1Q12904 312 aaKnown RBP23.21■■□□□ 1.31
MBD3-201ENST00000156825 H3BQV1 296 aa23.2■■□□□ 1.31
MBD3-201ENST00000156825 IFFO2Q5TF58 517 aa23.2■■□□□ 1.31
MBD3-201ENST00000156825 NLRP6P59044 892 aa23.2■■□□□ 1.3
MBD3-201ENST00000156825 VPS53Q5VIR6 699 aa23.19■■□□□ 1.3
MBD3-201ENST00000156825 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
MBD3-201ENST00000156825 FAM184AQ8NB25 1140 aa23.18■■□□□ 1.3
MBD3-201ENST00000156825 API5Q9BZZ5 524 aaKnown RBP23.18■■□□□ 1.3
MBD3-201ENST00000156825 MCTP1Q6DN14 999 aa23.18■■□□□ 1.3
MBD3-201ENST00000156825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.17■■□□□ 1.3
MBD3-201ENST00000156825 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
MBD3-201ENST00000156825 IFIT2P09913 472 aaKnown RBP23.17■■□□□ 1.3
MBD3-201ENST00000156825 ANO2Q9NQ90 1003 aa23.17■■□□□ 1.3
MBD3-201ENST00000156825 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
MBD3-201ENST00000156825 CFTRP13569 1480 aa23.15■■□□□ 1.3
MBD3-201ENST00000156825 MARCH6O60337 910 aa23.15■■□□□ 1.3
MBD3-201ENST00000156825 APPP05067 770 aa23.15■■□□□ 1.3
MBD3-201ENST00000156825 TPM4P67936 248 aa23.15■■□□□ 1.3
MBD3-201ENST00000156825 RAD21O60216 631 aa23.15■■□□□ 1.3
MBD3-201ENST00000156825 TCP11L2Q8N4U5 519 aa23.15■■□□□ 1.3
MBD3-201ENST00000156825 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.14■■□□□ 1.3
MBD3-201ENST00000156825 CSPP1Q1MSJ5 1256 aa23.14■■□□□ 1.29
MBD3-201ENST00000156825 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.29
MBD3-201ENST00000156825 CCDC34Q96HJ3 373 aa23.14■■□□□ 1.29
MBD3-201ENST00000156825 NESP48681 1621 aa23.13■■□□□ 1.29
MBD3-201ENST00000156825 ZNF428Q96B54 188 aa23.13■■□□□ 1.29
MBD3-201ENST00000156825 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
MBD3-201ENST00000156825 GNAI1P63096 354 aa23.13■■□□□ 1.29
MBD3-201ENST00000156825 SLC12A5Q9H2X9 1139 aa23.13■■□□□ 1.29
MBD3-201ENST00000156825 PES1O00541 588 aaKnown RBP23.13■■□□□ 1.29
MBD3-201ENST00000156825 KIF3AQ9Y496 699 aa23.12■■□□□ 1.29
MBD3-201ENST00000156825 NBPF8Q3BBV2 869 aa23.12■■□□□ 1.29
MBD3-201ENST00000156825 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
MBD3-201ENST00000156825 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
MBD3-201ENST00000156825 G3BP1Q13283 466 aaKnown RBP eCLIP23.1■■□□□ 1.29
MBD3-201ENST00000156825 TXNDC2Q86VQ3 553 aa23.1■■□□□ 1.29
MBD3-201ENST00000156825 ATF3P18847 181 aa23.1■■□□□ 1.29
MBD3-201ENST00000156825 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
MBD3-201ENST00000156825 REC8O95072 547 aa23.09■■□□□ 1.29
MBD3-201ENST00000156825 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
MBD3-201ENST00000156825 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
MBD3-201ENST00000156825 ARHGAP5Q13017 1502 aa23.09■■□□□ 1.29
MBD3-201ENST00000156825 DDX11L8A8MPP1 907 aa23.09■■□□□ 1.29
MBD3-201ENST00000156825 ZKSCAN1P17029 563 aaPredicted RBP23.08■■□□□ 1.29
MBD3-201ENST00000156825 CUX1P39880 1505 aa23.08■■□□□ 1.28
MBD3-201ENST00000156825 PPP2R1AP30153 589 aa23.07■■□□□ 1.28
MBD3-201ENST00000156825 PRKAR2BP31323 418 aa23.07■■□□□ 1.28
MBD3-201ENST00000156825 FOSBP53539 338 aa23.07■■□□□ 1.28
MBD3-201ENST00000156825 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
MBD3-201ENST00000156825 RIC3Q7Z5B4 369 aa23.07■■□□□ 1.28
MBD3-201ENST00000156825 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
MBD3-201ENST00000156825 NEUROD6Q96NK8 337 aa23.07■■□□□ 1.28
MBD3-201ENST00000156825 AKAP17AQ02040 695 aaKnown RBP23.06■■□□□ 1.28
MBD3-201ENST00000156825 RUFY2Q8WXA3 655 aa23.06■■□□□ 1.28
MBD3-201ENST00000156825 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
MBD3-201ENST00000156825 NOC3LQ8WTT2 800 aaKnown RBP23.05■■□□□ 1.28
MBD3-201ENST00000156825 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
MBD3-201ENST00000156825 VPS37DQ86XT2 251 aa23.04■■□□□ 1.28
MBD3-201ENST00000156825 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
MBD3-201ENST00000156825 PHF14O94880 888 aa23.04■■□□□ 1.28
MBD3-201ENST00000156825 RAPGEF3O95398 923 aa23.04■■□□□ 1.28
MBD3-201ENST00000156825 EXOSC9Q06265 439 aaKnown RBP23.04■■□□□ 1.28
MBD3-201ENST00000156825 C1orf115Q9H7X2 142 aa23.03■■□□□ 1.28
MBD3-201ENST00000156825 FAM177BA6PVY3 158 aa23.03■■□□□ 1.28
MBD3-201ENST00000156825 SYNE3Q6ZMZ3 975 aa23.02■■□□□ 1.28
MBD3-201ENST00000156825 FBXW7Q969H0 707 aa23.02■■□□□ 1.28
MBD3-201ENST00000156825 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
MBD3-201ENST00000156825 VPS37CA5D8V6 355 aaPredicted RBP23.02■■□□□ 1.28
MBD3-201ENST00000156825 CPLX1O14810 134 aa23.01■■□□□ 1.27
MBD3-201ENST00000156825 GSE1Q14687 1217 aa23.01■■□□□ 1.27
MBD3-201ENST00000156825 BECN2A8MW95 431 aa23.01■■□□□ 1.27
MBD3-201ENST00000156825 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
MBD3-201ENST00000156825 STAC3Q96MF2 364 aa23■■□□□ 1.27
MBD3-201ENST00000156825 CABP1Q9NZU7 370 aa23■■□□□ 1.27
MBD3-201ENST00000156825 ATP6V1DQ9Y5K8 247 aa23■■□□□ 1.27
MBD3-201ENST00000156825 UBTFL1P0CB47 393 aaPredicted RBP23■■□□□ 1.27
MBD3-201ENST00000156825 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
MBD3-201ENST00000156825 TPD52L1Q16890 204 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms