RNA–Protein interactions for RNA: ENSMUST00000171416.1

R3hdm4-202, Transcript of R3H domain-containing protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene R3hdm4, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4-202ENSMUST00000171416 Prrc2bQ7TPM1 1486 aaKnown RBP22.33■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Hspa5P20029 655 aaKnown RBP22.33■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Phlpp1Q8CHE4 1687 aa22.32■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 Washc2Q6PGL7 1334 aa22.32■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 Zc3h13E9Q784 1729 aaKnown RBP22.31■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 PplQ9R269 1755 aa22.29■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 Mroh3A0A1D5RM54 893 aa22.29■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 NefmP08553 848 aa22.29■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 Scaf11E9PZM7 1456 aaKnown RBP22.29■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 Plxnc1Q9QZC2 1574 aa22.27■■□□□ 1.16
R3hdm4-202ENSMUST00000171416 Txndc2Q6P902 515 aa22.26■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Rims2Q9EQZ7 1530 aa22.26■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Ncoa1P70365 1447 aa22.26■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Lmtk3Q5XJV6 1424 aa22.26■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Rgl3Q3UYI5 709 aa22.24■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Arid4bA2CG63 1314 aaKnown RBP22.24■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Tulp4Q9JIL5 1547 aa22.24■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Eif2ak4Q9QZ05 1648 aa22.23■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Myom1Q62234 1667 aaKnown RBP22.23■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Adamts13Q769J6 1426 aa22.22■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Rims1Q99NE5 1463 aa22.22■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 Myo3aQ8K3H5 1613 aa22.21■■□□□ 1.15
R3hdm4-202ENSMUST00000171416 AU022751B1B0V2 589 aa22.2■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Psme1P97371 249 aa22.2■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 P3h3Q8CG70 732 aa22.19■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 PalldQ9ET54 1408 aa22.19■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Ltbp4Q8K4G1 1666 aa22.19■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Arhgef28P97433 1693 aa22.17■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Iqgap1Q9JKF1 1657 aaKnown RBP22.16■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Gm13695A2AK44 830 aa22.15■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Cep152A2AUM9 1736 aaKnown RBP22.14■■□□□ 1.14
R3hdm4-202ENSMUST00000171416 Cdk13Q69ZA1 1511 aaKnown RBP22.14■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Setd1aE9PYH6 1716 aa22.14■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Slit3Q9WVB4 1523 aa22.13■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Nrxn3Q6P9K9 1571 aa22.13■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Med1Q925J9 1575 aa22.12■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Ifit1bl1D3Z6F0 470 aa22.11■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Pip4k2bQ80XI4 416 aa22.11■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 TonslQ6NZL6 1363 aa22.09■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 Polr3aB2RXC6 1390 aa22.09■■□□□ 1.13
R3hdm4-202ENSMUST00000171416 MaddQ80U28 1577 aa22.08■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 IghaA0A0A6YXW6 389 aa22.07■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Atp1b4Q99ME6 356 aa22.07■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Slc52a2Q9D8F3 450 aa22.07■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Cpsf1Q9EPU4 1441 aaKnown RBP22.07■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 PzpQ61838 1495 aa22.06■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Mbd5B1AYB6 1498 aa22.06■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Shq1Q7TMX5 569 aa22.06■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Grwd1Q810D6 446 aaKnown RBP22.06■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Rapgef3Q8VCC8 918 aa22.06■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Q9D9H8 365 aa22.03■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Srpk2O54781 681 aaKnown RBP22.02■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Asxl2Q8BZ32 1370 aa22.02■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Pik3r4Q8VD65 1358 aa22.02■■□□□ 1.12
R3hdm4-202ENSMUST00000171416 Cdk5rap2Q8K389 1822 aa22.01■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Kdm2aP59997 1161 aa22.01■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Neurod1Q60867 357 aa22.01■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Arap3Q8R5G7 1538 aa22■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Thsd7aQ69ZU6 1645 aa22■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Mug2P28666 1451 aa22■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Tubgcp6G5E8P0 1769 aa21.99■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Gm20521D3Z5F7 333 aa21.97■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Os9Q8K2C7 672 aa21.97■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Fan1Q69ZT1 1020 aa21.96■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Gli3Q61602 1583 aa21.96■■□□□ 1.11
R3hdm4-202ENSMUST00000171416 Puf60Q3UEB3 564 aaKnown RBP21.95■■□□□ 1.1
R3hdm4-202ENSMUST00000171416 Lrrc7Q80TE7 1490 aa21.94■■□□□ 1.1
R3hdm4-202ENSMUST00000171416 Sipa1l1Q8C0T5 1782 aa21.94■■□□□ 1.1
R3hdm4-202ENSMUST00000171416 Cps1Q8C196 1500 aa21.91■■□□□ 1.1
R3hdm4-202ENSMUST00000171416 Dapk1Q80YE7 1442 aa21.89■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 DnmbpQ6TXD4 1580 aa21.87■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 RalgapbQ8BQZ4 1484 aa21.87■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Plekhg1F6S200 1446 aa21.87■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Tns3Q5SSZ5 1440 aa21.86■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Ift172Q6VH22 1749 aa21.85■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Utp14aQ640M1 767 aaKnown RBP21.85■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Nphp4P59240 1425 aa21.84■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Stard8Q8K031 1019 aa21.84■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Stk26Q99JT2 416 aa21.84■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Unc13bQ9Z1N9 1602 aa21.83■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 HnrnpmQ9D0E1 729 aaKnown RBP21.83■■□□□ 1.09
R3hdm4-202ENSMUST00000171416 Rundc1Q0VDN7 615 aa21.82■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Usp40Q8BWR4 1235 aa21.82■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Col18a1P39061 1774 aa21.82■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Cep170bQ80U49 1574 aa21.81■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 IqubQ8CDK3 788 aa21.81■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Card11Q8CIS0 1159 aa21.8■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Las1lA2BE28 776 aaKnown RBP21.79■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Itsn2Q9Z0R6 1659 aa21.78■■□□□ 1.08
R3hdm4-202ENSMUST00000171416 Ppargc1bQ8VHJ7 1014 aa21.76■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Stag3O70576 1240 aa21.75■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Gtf2e1Q9D0D5 440 aa21.75■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Kif20bQ80WE4 1774 aaKnown RBP21.75■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Srcin1Q9QWI6 1250 aa21.75■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Col14a1Q80X19 1797 aa21.74■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Rreb1Q3UH06 1700 aaKnown RBP21.74■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Usp32F8VPZ3 1604 aa21.73■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Nwd1A6H603 1563 aa21.73■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Rpgrip1Q9EPQ2 1331 aa21.73■■□□□ 1.07
R3hdm4-202ENSMUST00000171416 Abca14E9Q8F8 1683 aa21.72■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms