RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Efcab6Q6P1E8 1516 aa21.81■■□□□ 1.08
Trim39-203ENSMUST00000113706 AatkQ80YE4 1365 aa21.81■■□□□ 1.08
Trim39-203ENSMUST00000113706 Tecpr2Q3UH45 1423 aa21.81■■□□□ 1.08
Trim39-203ENSMUST00000113706 Tubgcp6G5E8P0 1769 aa21.8■■□□□ 1.08
Trim39-203ENSMUST00000113706 Kdm2aP59997 1161 aa21.8■■□□□ 1.08
Trim39-203ENSMUST00000113706 Slc24a1Q91WD8 1130 aa21.8■■□□□ 1.08
Trim39-203ENSMUST00000113706 Ttbk1Q6PCN3 1308 aa21.79■■□□□ 1.08
Trim39-203ENSMUST00000113706 Talpid3E9PV87 1520 aa21.79■■□□□ 1.08
Trim39-203ENSMUST00000113706 Rims1Q99NE5 1463 aa21.79■■□□□ 1.08
Trim39-203ENSMUST00000113706 Adamts7Q68SA9 1657 aa21.77■■□□□ 1.08
Trim39-203ENSMUST00000113706 Wwc2Q6NXJ0 1187 aa21.76■■□□□ 1.07
Trim39-203ENSMUST00000113706 Exoc6Q8R313 802 aa21.76■■□□□ 1.07
Trim39-203ENSMUST00000113706 Myo3aQ8K3H5 1613 aa21.76■■□□□ 1.07
Trim39-203ENSMUST00000113706 Mrs2Q5NCE8 434 aa21.75■■□□□ 1.07
Trim39-203ENSMUST00000113706 Knl1Q66JQ7 1612 aa21.74■■□□□ 1.07
Trim39-203ENSMUST00000113706 Cdk5rap2Q8K389 1822 aa21.74■■□□□ 1.07
Trim39-203ENSMUST00000113706 Myom2Q14BI5 1463 aa21.73■■□□□ 1.07
Trim39-203ENSMUST00000113706 Pola1P33609 1465 aa21.73■■□□□ 1.07
Trim39-203ENSMUST00000113706 Gm38655A0A286YDK6 273 aa21.73■■□□□ 1.07
Trim39-203ENSMUST00000113706 Srcin1Q9QWI6 1250 aa21.71■■□□□ 1.07
Trim39-203ENSMUST00000113706 Os9Q8K2C7 672 aa21.7■■□□□ 1.07
Trim39-203ENSMUST00000113706 Gm20521D3Z5F7 333 aa21.69■■□□□ 1.06
Trim39-203ENSMUST00000113706 Slc4a2P13808 1237 aaKnown RBP21.68■■□□□ 1.06
Trim39-203ENSMUST00000113706 Zmym4A2A791 1549 aaKnown RBP21.68■■□□□ 1.06
Trim39-203ENSMUST00000113706 Itsn2Q9Z0R6 1659 aa21.67■■□□□ 1.06
Trim39-203ENSMUST00000113706 Qser1A2BIE1 1698 aa21.67■■□□□ 1.06
Trim39-203ENSMUST00000113706 Srpk2O54781 681 aaKnown RBP21.67■■□□□ 1.06
Trim39-203ENSMUST00000113706 Mroh1E0CZ22 1640 aa21.66■■□□□ 1.06
Trim39-203ENSMUST00000113706 Uggt1Q6P5E4 1551 aa21.66■■□□□ 1.06
Trim39-203ENSMUST00000113706 SafbD3YXK2 937 aaKnown RBP21.66■■□□□ 1.06
Trim39-203ENSMUST00000113706 Plxnc1Q9QZC2 1574 aa21.66■■□□□ 1.06
Trim39-203ENSMUST00000113706 PnisrA2AJT4 805 aaKnown RBP21.66■■□□□ 1.06
Trim39-203ENSMUST00000113706 Fan1Q69ZT1 1020 aa21.66■■□□□ 1.06
Trim39-203ENSMUST00000113706 Sipa1l1Q8C0T5 1782 aa21.65■■□□□ 1.06
Trim39-203ENSMUST00000113706 Skint5A7XUY5 1461 aa21.65■■□□□ 1.06
Trim39-203ENSMUST00000113706 PrxO55103 1391 aa21.64■■□□□ 1.05
Trim39-203ENSMUST00000113706 NpatQ8BMA5 1420 aa21.62■■□□□ 1.05
Trim39-203ENSMUST00000113706 Sbno1Q689Z5 1390 aa21.62■■□□□ 1.05
Trim39-203ENSMUST00000113706 AU022751B1B0V2 589 aa21.61■■□□□ 1.05
Trim39-203ENSMUST00000113706 Nphp4P59240 1425 aa21.61■■□□□ 1.05
Trim39-203ENSMUST00000113706 Myom1Q62234 1667 aaKnown RBP21.61■■□□□ 1.05
Trim39-203ENSMUST00000113706 Ahdc1Q6PAL7 1594 aaKnown RBP21.61■■□□□ 1.05
Trim39-203ENSMUST00000113706 DnmbpQ6TXD4 1580 aa21.61■■□□□ 1.05
Trim39-203ENSMUST00000113706 Hfm1D3Z4R1 1434 aa21.6■■□□□ 1.05
Trim39-203ENSMUST00000113706 Usp40Q8BWR4 1235 aa21.6■■□□□ 1.05
Trim39-203ENSMUST00000113706 Pank3Q8R2W9 370 aa21.6■■□□□ 1.05
Trim39-203ENSMUST00000113706 CltcQ68FD5 1675 aaKnown RBP21.6■■□□□ 1.05
Trim39-203ENSMUST00000113706 Afap1Q80YS6 731 aa21.59■■□□□ 1.05
Trim39-203ENSMUST00000113706 NrdcQ8BHG1 1161 aa21.59■■□□□ 1.05
Trim39-203ENSMUST00000113706 Gtf2e1Q9D0D5 440 aa21.58■■□□□ 1.05
Trim39-203ENSMUST00000113706 Stard8Q8K031 1019 aa21.57■■□□□ 1.04
Trim39-203ENSMUST00000113706 Puf60Q3UEB3 564 aaKnown RBP21.57■■□□□ 1.04
Trim39-203ENSMUST00000113706 Inpp5dQ9ES52 1191 aa21.56■■□□□ 1.04
Trim39-203ENSMUST00000113706 Tmf1B9EKI3 1091 aa21.54■■□□□ 1.04
Trim39-203ENSMUST00000113706 Arhgap23Q69ZH9 1483 aa21.54■■□□□ 1.04
Trim39-203ENSMUST00000113706 Slc4a1apE9PX68 744 aa21.53■■□□□ 1.04
Trim39-203ENSMUST00000113706 RictorQ6QI06 1708 aa21.52■■□□□ 1.04
Trim39-203ENSMUST00000113706 Gm16486A0A1D5RMD1 1434 aa21.52■■□□□ 1.04
Trim39-203ENSMUST00000113706 Zscan10Q3URR7 782 aa21.52■■□□□ 1.04
Trim39-203ENSMUST00000113706 Rsph4aQ8BYM7 716 aa21.52■■□□□ 1.04
Trim39-203ENSMUST00000113706 Kif13aQ9EQW7 1749 aa21.52■■□□□ 1.04
Trim39-203ENSMUST00000113706 Prrc2bQ7TPM1 1486 aaKnown RBP21.52■■□□□ 1.03
Trim39-203ENSMUST00000113706 PtprmP28828 1452 aa21.51■■□□□ 1.03
Trim39-203ENSMUST00000113706 Lrrc7Q80TE7 1490 aa21.51■■□□□ 1.03
Trim39-203ENSMUST00000113706 Ift172Q6VH22 1749 aa21.51■■□□□ 1.03
Trim39-203ENSMUST00000113706 CenpbP27790 599 aa21.51■■□□□ 1.03
Trim39-203ENSMUST00000113706 PalldQ9ET54 1408 aa21.49■■□□□ 1.03
Trim39-203ENSMUST00000113706 Itsn1Q9Z0R4 1714 aa21.48■■□□□ 1.03
Trim39-203ENSMUST00000113706 Fam184bQ0KK56 942 aa21.48■■□□□ 1.03
Trim39-203ENSMUST00000113706 Slc52a2Q9D8F3 450 aa21.48■■□□□ 1.03
Trim39-203ENSMUST00000113706 Dnajc5gQ8C632 165 aa21.47■■□□□ 1.03
Trim39-203ENSMUST00000113706 Rpgrip1lQ8CG73 1264 aa21.46■■□□□ 1.03
Trim39-203ENSMUST00000113706 Kdm5aQ3UXZ9 1690 aa21.46■■□□□ 1.03
Trim39-203ENSMUST00000113706 Arid4bA2CG63 1314 aaKnown RBP21.46■■□□□ 1.03
Trim39-203ENSMUST00000113706 Calr4Q3TQS0 420 aa21.45■■□□□ 1.02
Trim39-203ENSMUST00000113706 Anp32bQ9EST5 272 aaKnown RBP21.45■■□□□ 1.02
Trim39-203ENSMUST00000113706 Naip7Q9JIB3 1402 aa21.42■■□□□ 1.02
Trim39-203ENSMUST00000113706 Stag3O70576 1240 aa21.42■■□□□ 1.02
Trim39-203ENSMUST00000113706 MaddQ80U28 1577 aa21.41■■□□□ 1.02
Trim39-203ENSMUST00000113706 Adamtsl3G3UXC7 1706 aa21.41■■□□□ 1.02
Trim39-203ENSMUST00000113706 Ercc6l2Q9JIM3 1537 aa21.41■■□□□ 1.02
Trim39-203ENSMUST00000113706 Q7TT23 1179 aa21.39■■□□□ 1.02
Trim39-203ENSMUST00000113706 Arhgef28P97433 1693 aa21.39■■□□□ 1.01
Trim39-203ENSMUST00000113706 Tex14Q7M6U3 1450 aa21.38■■□□□ 1.01
Trim39-203ENSMUST00000113706 IqubQ8CDK3 788 aa21.37■■□□□ 1.01
Trim39-203ENSMUST00000113706 Atp1b4Q99ME6 356 aa21.37■■□□□ 1.01
Trim39-203ENSMUST00000113706 Shq1Q7TMX5 569 aa21.37■■□□□ 1.01
Trim39-203ENSMUST00000113706 Eif5bQ05D44 1216 aaKnown RBP21.36■■□□□ 1.01
Trim39-203ENSMUST00000113706 Zscan21Q07231 555 aa21.35■■□□□ 1.01
Trim39-203ENSMUST00000113706 Zc3h13E9Q784 1729 aaKnown RBP21.34■■□□□ 1.01
Trim39-203ENSMUST00000113706 Stk26Q99JT2 416 aa21.33■■□□□ 1.01
Trim39-203ENSMUST00000113706 InsrP15208 1372 aa21.33■■□□□ 1.01
Trim39-203ENSMUST00000113706 Cep170bQ80U49 1574 aa21.32■■□□□ 1
Trim39-203ENSMUST00000113706 Ppp2r1aQ76MZ3 589 aa21.32■■□□□ 1
Trim39-203ENSMUST00000113706 Med14A2ABV5 1459 aaKnown RBP21.31■■□□□ 1
Trim39-203ENSMUST00000113706 Rab3gap2Q8BMG7 1366 aa21.31■■□□□ 1
Trim39-203ENSMUST00000113706 Cnga1P29974 684 aa21.31■■□□□ 1
Trim39-203ENSMUST00000113706 Q9D9H8 365 aa21.3■■□□□ 1
Trim39-203ENSMUST00000113706 CenpjQ569L8 1344 aa21.3■■□□□ 1
Trim39-203ENSMUST00000113706 Plppr3Q7TPB0 716 aa21.3■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms