RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 WrnO09053 1401 aa17.78■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Tpm2P58774 284 aa17.77■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Stard8Q8K031 1019 aa17.77■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Ddx11Q6AXC6 880 aa17.77■□□□□ 0.44
Shroom3-202ENSMUST00000113054 A0A0U1RNP2 1173 aa17.77■□□□□ 0.44
Shroom3-202ENSMUST00000113054 Hmox1P14901 289 aa17.77■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Cgnl1Q6AW69 1298 aa17.76■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Soga1E1U8D0 1418 aa17.76■□□□□ 0.43
Shroom3-202ENSMUST00000113054 SetQ9EQU5 289 aaKnown RBP17.76■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Fam184bQ0KK56 942 aa17.76■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Ric3Q8BPM6 367 aa17.76■□□□□ 0.43
Shroom3-202ENSMUST00000113054 St18Q80TY4 1045 aa17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Q9D9H8 365 aa17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Cplx1P63040 134 aa17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Sugp2Q8CH09 1067 aa17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Utp3Q9JI13 469 aaKnown RBP17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Cfdp1O88271 295 aaKnown RBP17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 AcrbpQ3V140 540 aa17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Sh3bgrQ9WUZ7 214 aa17.75■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Ftsj3Q9DBE9 838 aaKnown RBP17.74■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Nolc1E9Q5C9 702 aaKnown RBP17.73■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Gtf2f1Q3THK3 508 aaKnown RBP17.73■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Stk3Q9JI10 497 aa17.73■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Rapgef2Q8CHG7 1496 aa17.73■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Nol12Q8BG17 217 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Rec8Q8C5S7 591 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 March6Q6ZQ89 909 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Zranb3Q6NZP1 1069 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Cplx2P84086 134 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Bicd2Q921C5 820 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Cc2d2bA0A286YDU8 1405 aa17.72■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Mphosph10Q810V0 681 aaKnown RBP17.71■□□□□ 0.43
Shroom3-202ENSMUST00000113054 TatQ8QZR1 454 aa17.71■□□□□ 0.43
Shroom3-202ENSMUST00000113054 MycnP03966 462 aaKnown RBP17.71■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Rsph3aQ3UFY4 516 aa17.71■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Carmil1Q6EDY6 1374 aa17.71■□□□□ 0.43
Shroom3-202ENSMUST00000113054 Rab11fip3Q8CHD8 1047 aa17.71■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Tdrd9Q14BI7 1383 aa17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Hnrnpul1Q8VDM6 859 aaKnown RBP17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Gsto1O09131 240 aa17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Tpm1P58771 284 aa17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Bcl11aQ9QYE3 773 aa17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 IbspQ61711 324 aa17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 ErbinQ80TH2 1402 aa17.7■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Becn1O88597 448 aa17.69■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Phldb1Q6PDH0 1371 aaKnown RBP17.69■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Ripply1Q2WG77 201 aa17.69■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Rad54l2Q99NG0 1466 aa17.69■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Rock1P70335 1354 aa17.69■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Casq1O09165 405 aa17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Mad1l1Q9WTX8 717 aaKnown RBP17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Smg7Q5RJH6 1138 aaKnown RBP17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Rrp12Q6P5B0 1295 aaKnown RBP17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Srek1Q8BZX4 494 aaKnown RBP17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Cspp1B2RX88 1205 aa17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 NexnQ7TPW1 607 aa17.68■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Evc2Q8K1G2 1220 aa17.67■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Q9D2X8 372 aa17.67■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Gsdma3Q5Y4Y6 464 aa17.66■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Zscan10Q3URR7 782 aa17.66■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Stk11ipQ3TAA7 1072 aa17.65■□□□□ 0.42
Shroom3-202ENSMUST00000113054 MpripP97434 1024 aa17.65■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Cnnm1Q0GA42 951 aa17.65■□□□□ 0.42
Shroom3-202ENSMUST00000113054 UacaQ8CGB3 1411 aa17.65■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Sv2bQ8BG39 683 aa17.65■□□□□ 0.42
Shroom3-202ENSMUST00000113054 KinQ8K339 391 aa17.64■□□□□ 0.42
Shroom3-202ENSMUST00000113054 Me1P06801 572 aa17.64■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Pank1Q8K4K6 548 aa17.64■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Rbm25B2RY56 838 aaKnown RBP17.64■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Kdm4aQ8BW72 1064 aa17.64■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Atp2b2Q9R0K7 1198 aa17.64■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Jph4Q80WT0 628 aa17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Dapk1Q80YE7 1442 aa17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Fkbp4P30416 458 aa17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Rnf20Q5DTM8 973 aa17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Smc3Q9CW03 1217 aaKnown RBP17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Usp48Q3V0C5 1052 aa17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 IkQ9Z1M8 557 aaKnown RBP17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Fbln2P37889 1221 aa17.62■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Ak7Q9D2H2 614 aa17.61■□□□□ 0.41
Shroom3-202ENSMUST00000113054 PogkQ80TC5 607 aa17.61■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Sycp1Q62209 993 aa17.6■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Smg6P61406 1418 aaKnown RBP17.6■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Cecr2E9Q2Z1 1453 aa17.6■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Erich4Q3UNU4 136 aa17.59■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Puf60Q3UEB3 564 aaKnown RBP17.59■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Ell2Q3UKU1 639 aa17.59■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Dhx29Q6PGC1 1365 aaKnown RBP17.59■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Nap1l1P28656 391 aaKnown RBP17.58■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Ipo7Q9EPL8 1038 aaKnown RBP17.58■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Gm21698A0A087WQP8 267 aa17.58■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Gm21671G3UY31 267 aa17.58■□□□□ 0.41
Shroom3-202ENSMUST00000113054 Tmc1Q8R4P5 757 aa17.58■□□□□ 0.4
Shroom3-202ENSMUST00000113054 PhaxQ9JJT9 385 aaKnown RBP17.58■□□□□ 0.4
Shroom3-202ENSMUST00000113054 LrpprcQ6PB66 1392 aaKnown RBP17.58■□□□□ 0.4
Shroom3-202ENSMUST00000113054 Rpgrip1lQ8CG73 1264 aa17.58■□□□□ 0.4
Shroom3-202ENSMUST00000113054 Babam1Q3UI43 333 aa17.57■□□□□ 0.4
Shroom3-202ENSMUST00000113054 Swt1Q9DBQ9 907 aa17.57■□□□□ 0.4
Shroom3-202ENSMUST00000113054 Gnai1B2RSH2 354 aa17.57■□□□□ 0.4
Shroom3-202ENSMUST00000113054 Gnai3Q9DC51 354 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms