RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Mfap1bC0HKD9 439 aaKnown RBP12.19□□□□□ -0.46
Trim9-201ENSMUST00000110520 NudcO35685 332 aaKnown RBP12.19□□□□□ -0.46
Trim9-201ENSMUST00000110520 Wdr7Q920I9 1489 aa12.19□□□□□ -0.46
Trim9-201ENSMUST00000110520 Plcb2A3KGF7 1181 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Tnnt1O88346 262 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Atp2b2Q9R0K7 1198 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Atp7aQ64430 1491 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Prkrip1Q9CWV6 186 aaKnown RBP12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Polr3aB2RXC6 1390 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Rab3gap2Q8BMG7 1366 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Afap1Q80YS6 731 aa12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Eif2s2Q99L45 331 aaKnown RBP12.18□□□□□ -0.46
Trim9-201ENSMUST00000110520 Ttc21bQ0HA38 1315 aa12.17□□□□□ -0.46
Trim9-201ENSMUST00000110520 GorabQ8BRM2 368 aa12.17□□□□□ -0.46
Trim9-201ENSMUST00000110520 Ccar1Q8CH18 1146 aaKnown RBP12.17□□□□□ -0.46
Trim9-201ENSMUST00000110520 Adcy10Q8C0T9 1614 aa12.17□□□□□ -0.46
Trim9-201ENSMUST00000110520 Ralbp1Q62172 648 aa12.17□□□□□ -0.46
Trim9-201ENSMUST00000110520 Sart3Q9JLI8 962 aaKnown RBP12.17□□□□□ -0.46
Trim9-201ENSMUST00000110520 Ipo8Q7TMY7 1010 aa12.16□□□□□ -0.46
Trim9-201ENSMUST00000110520 Atxn3Q9CVD2 355 aa12.16□□□□□ -0.46
Trim9-201ENSMUST00000110520 Atp10dQ8K2X1 1416 aa12.16□□□□□ -0.46
Trim9-201ENSMUST00000110520 Mug2P28666 1451 aa12.16□□□□□ -0.46
Trim9-201ENSMUST00000110520 Ssh2Q5SW75 1423 aa12.16□□□□□ -0.46
Trim9-201ENSMUST00000110520 Tspyl2Q7TQI8 677 aa12.15□□□□□ -0.46
Trim9-201ENSMUST00000110520 Peg3Q3URU2 1571 aa12.15□□□□□ -0.47
Trim9-201ENSMUST00000110520 Ak7Q9D2H2 614 aa12.15□□□□□ -0.47
Trim9-201ENSMUST00000110520 Nup160Q9Z0W3 1402 aaKnown RBP12.14□□□□□ -0.47
Trim9-201ENSMUST00000110520 KarsQ99MN1 595 aaKnown RBP12.14□□□□□ -0.47
Trim9-201ENSMUST00000110520 Asxl1P59598 1514 aa12.14□□□□□ -0.47
Trim9-201ENSMUST00000110520 Cdk13Q69ZA1 1511 aaKnown RBP12.14□□□□□ -0.47
Trim9-201ENSMUST00000110520 Fancd2Q80V62 1450 aa12.13□□□□□ -0.47
Trim9-201ENSMUST00000110520 Kdm3bQ6ZPY7 1562 aa12.13□□□□□ -0.47
Trim9-201ENSMUST00000110520 Caskin1Q6P9K8 1431 aa12.13□□□□□ -0.47
Trim9-201ENSMUST00000110520 Iqcf3Q9D498 203 aa12.12□□□□□ -0.47
Trim9-201ENSMUST00000110520 Liat1Q810M6 228 aa12.12□□□□□ -0.47
Trim9-201ENSMUST00000110520 Gsto1O09131 240 aa12.11□□□□□ -0.47
Trim9-201ENSMUST00000110520 Cc2d1aQ8K1A6 943 aa12.11□□□□□ -0.47
Trim9-201ENSMUST00000110520 Map7O88735 730 aa12.11□□□□□ -0.47
Trim9-201ENSMUST00000110520 Trim58Q5NCC9 485 aa12.11□□□□□ -0.47
Trim9-201ENSMUST00000110520 G3bp1P97855 465 aaKnown RBP12.1□□□□□ -0.47
Trim9-201ENSMUST00000110520 Abca5Q8K448 1642 aa12.1□□□□□ -0.47
Trim9-201ENSMUST00000110520 Camsap2Q8C1B1 1461 aa12.1□□□□□ -0.47
Trim9-201ENSMUST00000110520 Plekhh1Q80TI1 1356 aa12.1□□□□□ -0.47
Trim9-201ENSMUST00000110520 Rtf1A2AQ19 715 aaKnown RBP12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Cabp4Q8VHC5 271 aa12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Dennd4bQ3U1Y4 1499 aa12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Kdm6bQ5NCY0 1641 aa12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Ccdc146E9Q9F7 977 aa12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Dusp27Q148W8 1138 aa12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Rtn4Q99P72 1162 aaKnown RBP12.09□□□□□ -0.47
Trim9-201ENSMUST00000110520 Htatsf1Q8BGC0 757 aa12.08□□□□□ -0.47
Trim9-201ENSMUST00000110520 Q3TQI7 289 aaKnown RBP12.08□□□□□ -0.48
Trim9-201ENSMUST00000110520 Ythdc2B2RR83 1445 aaKnown RBP12.07□□□□□ -0.48
Trim9-201ENSMUST00000110520 AlkP97793 1621 aa12.07□□□□□ -0.48
Trim9-201ENSMUST00000110520 Rbm25B2RY56 838 aaKnown RBP12.07□□□□□ -0.48
Trim9-201ENSMUST00000110520 KnstrnQ9D9Z1 312 aaKnown RBP12.06□□□□□ -0.48
Trim9-201ENSMUST00000110520 Cald1E9QA15 768 aaKnown RBP12.06□□□□□ -0.48
Trim9-201ENSMUST00000110520 Cdk19Q8BWD8 501 aa12.06□□□□□ -0.48
Trim9-201ENSMUST00000110520 Adamts12Q811B3 1600 aa12.06□□□□□ -0.48
Trim9-201ENSMUST00000110520 AI481877A2ALV5 1481 aa12.06□□□□□ -0.48
Trim9-201ENSMUST00000110520 Igf1rQ60751 1373 aa12.05□□□□□ -0.48
Trim9-201ENSMUST00000110520 Mapkbp1Q6NS57 1503 aa12.05□□□□□ -0.48
Trim9-201ENSMUST00000110520 RalgapbQ8BQZ4 1484 aa12.05□□□□□ -0.48
Trim9-201ENSMUST00000110520 Hsp90b1P08113 802 aaKnown RBP12.04□□□□□ -0.48
Trim9-201ENSMUST00000110520 Stk31Q99MW1 1018 aa12.04□□□□□ -0.48
Trim9-201ENSMUST00000110520 Usp16Q99LG0 825 aa12.04□□□□□ -0.48
Trim9-201ENSMUST00000110520 Naip6Q9JIB6 1403 aa12.04□□□□□ -0.48
Trim9-201ENSMUST00000110520 Gas2l2Q5SSG4 860 aa12.04□□□□□ -0.48
Trim9-201ENSMUST00000110520 Erbb3Q61526 1339 aa12.03□□□□□ -0.48
Trim9-201ENSMUST00000110520 Ccdc183A2AJB1 534 aa12.03□□□□□ -0.48
Trim9-201ENSMUST00000110520 MlecQ6ZQI3 291 aaKnown RBP12.03□□□□□ -0.48
Trim9-201ENSMUST00000110520 Arhgef12Q8R4H2 1543 aaKnown RBP12.03□□□□□ -0.48
Trim9-201ENSMUST00000110520 Gm21190A0A0G2JGJ6 266 aa12.02□□□□□ -0.49
Trim9-201ENSMUST00000110520 Rfx1P48377 963 aa12.02□□□□□ -0.49
Trim9-201ENSMUST00000110520 Arhgef11Q68FM7 1552 aa12.02□□□□□ -0.49
Trim9-201ENSMUST00000110520 Triml2E9PW10 424 aa12.02□□□□□ -0.49
Trim9-201ENSMUST00000110520 MpripP97434 1024 aa12.01□□□□□ -0.49
Trim9-201ENSMUST00000110520 SphkapQ6NSW3 1687 aa12.01□□□□□ -0.49
Trim9-201ENSMUST00000110520 Stk11ipQ3TAA7 1072 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Chmp4cQ9D7F7 232 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Gcc2Q8CHG3 1679 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Irx3P81067 507 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Ccdc9Q8VC31 543 aaKnown RBP12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Swt1Q9DBQ9 907 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Kank1E9Q238 1360 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 HnrnpmQ9D0E1 729 aaKnown RBP12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Cabp2Q9JLK4 216 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 PalmQ9Z0P4 383 aa12□□□□□ -0.49
Trim9-201ENSMUST00000110520 Ylpm1Q9R0I7 1386 aaKnown RBP11.99□□□□□ -0.49
Trim9-201ENSMUST00000110520 Chmp4bQ9D8B3 224 aaKnown RBP11.99□□□□□ -0.49
Trim9-201ENSMUST00000110520 Cavin4A2AMM0 362 aa11.98□□□□□ -0.49
Trim9-201ENSMUST00000110520 Ap3b2Q9JME5 1082 aa11.98□□□□□ -0.49
Trim9-201ENSMUST00000110520 HnrnpuQ8VEK3 800 aaKnown RBP11.98□□□□□ -0.49
Trim9-201ENSMUST00000110520 Ric3Q8BPM6 367 aa11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 Abcc1O35379 1528 aa11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 Abca16E9PWJ7 1678 aa11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 PtprgQ05909 1442 aa11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 Cpsf1Q9EPU4 1441 aaKnown RBP11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 Mcm10Q0VBD2 885 aa11.97□□□□□ -0.49
Trim9-201ENSMUST00000110520 Gm156Q58A37 223 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms