RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Pola1P33609 1465 aa20.9■□□□□ 0.94
Vcan-201ENSMUST00000109543 Slc4a1apE9PX68 744 aa20.89■□□□□ 0.94
Vcan-201ENSMUST00000109543 L3mbtl2P59178 703 aa20.89■□□□□ 0.94
Vcan-201ENSMUST00000109543 Topbp1Q6ZQF0 1515 aa20.89■□□□□ 0.93
Vcan-201ENSMUST00000109543 Prex1Q69ZK0 1650 aa20.89■□□□□ 0.93
Vcan-201ENSMUST00000109543 Plch2A2AP18 1501 aa20.88■□□□□ 0.93
Vcan-201ENSMUST00000109543 Ppp4r2Q0VGB7 417 aa20.87■□□□□ 0.93
Vcan-201ENSMUST00000109543 Wdr43Q6ZQL4 677 aaKnown RBP20.87■□□□□ 0.93
Vcan-201ENSMUST00000109543 Abca8aQ8K442 1620 aa20.86■□□□□ 0.93
Vcan-201ENSMUST00000109543 Cep152A2AUM9 1736 aaKnown RBP20.86■□□□□ 0.93
Vcan-201ENSMUST00000109543 Mak16Q8BGS0 296 aaKnown RBP20.86■□□□□ 0.93
Vcan-201ENSMUST00000109543 Srpk2O54781 681 aaKnown RBP20.85■□□□□ 0.93
Vcan-201ENSMUST00000109543 AatkQ80YE4 1365 aa20.85■□□□□ 0.93
Vcan-201ENSMUST00000109543 Ptch1Q61115 1434 aa20.85■□□□□ 0.93
Vcan-201ENSMUST00000109543 Col17a1Q07563 1470 aa20.85■□□□□ 0.93
Vcan-201ENSMUST00000109543 Gli2Q0VGT2 1544 aa20.84■□□□□ 0.93
Vcan-201ENSMUST00000109543 Fan1Q69ZT1 1020 aa20.84■□□□□ 0.93
Vcan-201ENSMUST00000109543 Gm16486A0A1D5RMD1 1434 aa20.84■□□□□ 0.93
Vcan-201ENSMUST00000109543 Fam184bQ0KK56 942 aa20.83■□□□□ 0.93
Vcan-201ENSMUST00000109543 Gtf2e1Q9D0D5 440 aa20.83■□□□□ 0.93
Vcan-201ENSMUST00000109543 Atp10aO54827 1508 aa20.83■□□□□ 0.92
Vcan-201ENSMUST00000109543 Myo3aQ8K3H5 1613 aa20.83■□□□□ 0.92
Vcan-201ENSMUST00000109543 Zmym4A2A791 1549 aaKnown RBP20.82■□□□□ 0.92
Vcan-201ENSMUST00000109543 Usp40Q8BWR4 1235 aa20.82■□□□□ 0.92
Vcan-201ENSMUST00000109543 Tex14Q7M6U3 1450 aa20.81■□□□□ 0.92
Vcan-201ENSMUST00000109543 Itsn2Q9Z0R6 1659 aa20.81■□□□□ 0.92
Vcan-201ENSMUST00000109543 Zfp444Q3TDV8 331 aaKnown RBP20.81■□□□□ 0.92
Vcan-201ENSMUST00000109543 Rims1Q99NE5 1463 aa20.81■□□□□ 0.92
Vcan-201ENSMUST00000109543 Arid4bA2CG63 1314 aaKnown RBP20.81■□□□□ 0.92
Vcan-201ENSMUST00000109543 Adgrb3Q80ZF8 1522 aa20.81■□□□□ 0.92
Vcan-201ENSMUST00000109543 Depdc5P61460 1591 aa20.8■□□□□ 0.92
Vcan-201ENSMUST00000109543 Gm156Q58A37 223 aa20.79■□□□□ 0.92
Vcan-201ENSMUST00000109543 AglF8VPN4 1532 aa20.78■□□□□ 0.92
Vcan-201ENSMUST00000109543 Stard8Q8K031 1019 aa20.78■□□□□ 0.92
Vcan-201ENSMUST00000109543 Ehbp1l1Q99MS7 1716 aa20.78■□□□□ 0.92
Vcan-201ENSMUST00000109543 Ppp2r1aQ76MZ3 589 aa20.77■□□□□ 0.92
Vcan-201ENSMUST00000109543 Rad21Q61550 635 aaKnown RBP20.77■□□□□ 0.92
Vcan-201ENSMUST00000109543 Kank1E9Q238 1360 aa20.77■□□□□ 0.92
Vcan-201ENSMUST00000109543 Ak9G3UYQ4 1894 aa20.76■□□□□ 0.91
Vcan-201ENSMUST00000109543 Cdc42bpgQ80UW5 1551 aa20.76■□□□□ 0.91
Vcan-201ENSMUST00000109543 Erbb3Q61526 1339 aa20.76■□□□□ 0.91
Vcan-201ENSMUST00000109543 Nphp4P59240 1425 aa20.76■□□□□ 0.91
Vcan-201ENSMUST00000109543 Trpm1Q2TV84 1622 aa20.75■□□□□ 0.91
Vcan-201ENSMUST00000109543 Cdk5rap2Q8K389 1822 aa20.75■□□□□ 0.91
Vcan-201ENSMUST00000109543 Rab3gap2Q8BMG7 1366 aa20.74■□□□□ 0.91
Vcan-201ENSMUST00000109543 Dip2cE9PWR4 1557 aa20.74■□□□□ 0.91
Vcan-201ENSMUST00000109543 Efcab6Q6P1E8 1516 aa20.73■□□□□ 0.91
Vcan-201ENSMUST00000109543 Myom2Q14BI5 1463 aa20.73■□□□□ 0.91
Vcan-201ENSMUST00000109543 Clasp1Q80TV8 1535 aaKnown RBP20.72■□□□□ 0.91
Vcan-201ENSMUST00000109543 Esx1O88933 382 aa20.72■□□□□ 0.91
Vcan-201ENSMUST00000109543 Puf60Q3UEB3 564 aaKnown RBP20.72■□□□□ 0.91
Vcan-201ENSMUST00000109543 RereQ80TZ9 1558 aa20.71■□□□□ 0.91
Vcan-201ENSMUST00000109543 Prdm2A2A7B5 1709 aaKnown RBP20.7■□□□□ 0.9
Vcan-201ENSMUST00000109543 Tecpr2Q3UH45 1423 aa20.7■□□□□ 0.9
Vcan-201ENSMUST00000109543 AdgbG3UZ78 1657 aa20.7■□□□□ 0.9
Vcan-201ENSMUST00000109543 Supt16hQ920B9 1047 aa20.7■□□□□ 0.9
Vcan-201ENSMUST00000109543 Akap12Q9WTQ5 1684 aa20.7■□□□□ 0.9
Vcan-201ENSMUST00000109543 Kif7B7ZNG0 1348 aa20.69■□□□□ 0.9
Vcan-201ENSMUST00000109543 Kdm5aQ3UXZ9 1690 aa20.68■□□□□ 0.9
Vcan-201ENSMUST00000109543 Upf2A2AT37 1269 aaKnown RBP20.68■□□□□ 0.9
Vcan-201ENSMUST00000109543 Kcnh8P59111 1102 aa20.68■□□□□ 0.9
Vcan-201ENSMUST00000109543 Ino80Q6ZPV2 1559 aa20.68■□□□□ 0.9
Vcan-201ENSMUST00000109543 DnmbpQ6TXD4 1580 aa20.67■□□□□ 0.9
Vcan-201ENSMUST00000109543 AU022751B1B0V2 589 aa20.66■□□□□ 0.9
Vcan-201ENSMUST00000109543 Dcaf11Q91VU6 549 aa20.66■□□□□ 0.9
Vcan-201ENSMUST00000109543 Uggt1Q6P5E4 1551 aa20.66■□□□□ 0.9
Vcan-201ENSMUST00000109543 Talpid3E9PV87 1520 aa20.65■□□□□ 0.9
Vcan-201ENSMUST00000109543 Atf7ipQ7TT18 1306 aa20.64■□□□□ 0.9
Vcan-201ENSMUST00000109543 Sipa1l1Q8C0T5 1782 aa20.64■□□□□ 0.89
Vcan-201ENSMUST00000109543 Kiaa0556Q8C753 1610 aa20.63■□□□□ 0.89
Vcan-201ENSMUST00000109543 CrbnQ8C7D2 445 aa20.63■□□□□ 0.89
Vcan-201ENSMUST00000109543 Myt1Q8CFC2 1127 aa20.63■□□□□ 0.89
Vcan-201ENSMUST00000109543 Yeats2Q3TUF7 1407 aa20.63■□□□□ 0.89
Vcan-201ENSMUST00000109543 Slc4a3P16283 1227 aa20.62■□□□□ 0.89
Vcan-201ENSMUST00000109543 Cnga1P29974 684 aa20.62■□□□□ 0.89
Vcan-201ENSMUST00000109543 Stag3O70576 1240 aa20.62■□□□□ 0.89
Vcan-201ENSMUST00000109543 Kif16bB1AVY7 1312 aa20.62■□□□□ 0.89
Vcan-201ENSMUST00000109543 Nlrp6Q91WS2 869 aa20.61■□□□□ 0.89
Vcan-201ENSMUST00000109543 Prdm10Q3UTQ7 1184 aa20.61■□□□□ 0.89
Vcan-201ENSMUST00000109543 Knl1Q66JQ7 1612 aa20.59■□□□□ 0.89
Vcan-201ENSMUST00000109543 Plxnc1Q9QZC2 1574 aa20.59■□□□□ 0.89
Vcan-201ENSMUST00000109543 Lrrc7Q80TE7 1490 aa20.58■□□□□ 0.89
Vcan-201ENSMUST00000109543 Adgrl3Q80TS3 1537 aa20.58■□□□□ 0.89
Vcan-201ENSMUST00000109543 Cul9Q80TT8 1865 aa20.58■□□□□ 0.89
Vcan-201ENSMUST00000109543 PalldQ9ET54 1408 aa20.58■□□□□ 0.88
Vcan-201ENSMUST00000109543 Mroh1E0CZ22 1640 aa20.58■□□□□ 0.88
Vcan-201ENSMUST00000109543 Liat1Q810M6 228 aa20.56■□□□□ 0.88
Vcan-201ENSMUST00000109543 Myom1Q62234 1667 aaKnown RBP20.56■□□□□ 0.88
Vcan-201ENSMUST00000109543 Gprasp1Q5U4C1 1347 aa20.55■□□□□ 0.88
Vcan-201ENSMUST00000109543 IqubQ8CDK3 788 aa20.55■□□□□ 0.88
Vcan-201ENSMUST00000109543 Cfap65Q3V0B4 1847 aa20.55■□□□□ 0.88
Vcan-201ENSMUST00000109543 Slc52a2Q9D8F3 450 aa20.54■□□□□ 0.88
Vcan-201ENSMUST00000109543 Adamts7Q68SA9 1657 aa20.54■□□□□ 0.88
Vcan-201ENSMUST00000109543 NeflP08551 543 aa20.54■□□□□ 0.88
Vcan-201ENSMUST00000109543 Skint5A7XUY5 1461 aa20.54■□□□□ 0.88
Vcan-201ENSMUST00000109543 Mink1Q9JM52 1308 aa20.52■□□□□ 0.88
Vcan-201ENSMUST00000109543 MaddQ80U28 1577 aa20.51■□□□□ 0.87
Vcan-201ENSMUST00000109543 Ppp1r18Q8BQ30 594 aa20.5■□□□□ 0.87
Vcan-201ENSMUST00000109543 InsrP15208 1372 aa20.5■□□□□ 0.87
Vcan-201ENSMUST00000109543 Usp19Q3UJD6 1360 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms