RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Wwc2Q6NXJ0 1187 aa20.48■□□□□ 0.87
Trim11-203ENSMUST00000108810 Adamts7Q68SA9 1657 aa20.47■□□□□ 0.87
Trim11-203ENSMUST00000108810 Cdk5rap2Q8K389 1822 aa20.47■□□□□ 0.87
Trim11-203ENSMUST00000108810 Myom2Q14BI5 1463 aa20.47■□□□□ 0.87
Trim11-203ENSMUST00000108810 Slc4a2P13808 1237 aaKnown RBP20.47■□□□□ 0.87
Trim11-203ENSMUST00000108810 Myo3aQ8K3H5 1613 aa20.47■□□□□ 0.87
Trim11-203ENSMUST00000108810 Synj2Q9D2G5 1434 aa20.47■□□□□ 0.87
Trim11-203ENSMUST00000108810 PnisrA2AJT4 805 aaKnown RBP20.46■□□□□ 0.87
Trim11-203ENSMUST00000108810 Talpid3E9PV87 1520 aa20.46■□□□□ 0.87
Trim11-203ENSMUST00000108810 Itsn2Q9Z0R6 1659 aa20.45■□□□□ 0.86
Trim11-203ENSMUST00000108810 Tnnt3Q9QZ47 272 aa20.43■□□□□ 0.86
Trim11-203ENSMUST00000108810 Stk24Q99KH8 431 aa20.42■□□□□ 0.86
Trim11-203ENSMUST00000108810 Sipa1l1Q8C0T5 1782 aa20.42■□□□□ 0.86
Trim11-203ENSMUST00000108810 Cfap65Q3V0B4 1847 aa20.41■□□□□ 0.86
Trim11-203ENSMUST00000108810 Sbno1Q689Z5 1390 aa20.41■□□□□ 0.86
Trim11-203ENSMUST00000108810 Knl1Q66JQ7 1612 aa20.41■□□□□ 0.86
Trim11-203ENSMUST00000108810 Uggt1Q6P5E4 1551 aa20.4■□□□□ 0.86
Trim11-203ENSMUST00000108810 Plxnc1Q9QZC2 1574 aa20.4■□□□□ 0.86
Trim11-203ENSMUST00000108810 DnmbpQ6TXD4 1580 aa20.39■□□□□ 0.85
Trim11-203ENSMUST00000108810 Kdm2aP59997 1161 aa20.38■□□□□ 0.85
Trim11-203ENSMUST00000108810 Zbtb4Q5F293 982 aa20.38■□□□□ 0.85
Trim11-203ENSMUST00000108810 Ppp1r18Q8BQ30 594 aa20.38■□□□□ 0.85
Trim11-203ENSMUST00000108810 Srcin1Q9QWI6 1250 aa20.38■□□□□ 0.85
Trim11-203ENSMUST00000108810 Mroh1E0CZ22 1640 aa20.38■□□□□ 0.85
Trim11-203ENSMUST00000108810 PrxO55103 1391 aa20.38■□□□□ 0.85
Trim11-203ENSMUST00000108810 Slc24a1Q91WD8 1130 aa20.37■□□□□ 0.85
Trim11-203ENSMUST00000108810 Zmym4A2A791 1549 aaKnown RBP20.36■□□□□ 0.85
Trim11-203ENSMUST00000108810 Myom1Q62234 1667 aaKnown RBP20.36■□□□□ 0.85
Trim11-203ENSMUST00000108810 Nphp4P59240 1425 aa20.35■□□□□ 0.85
Trim11-203ENSMUST00000108810 Skint5A7XUY5 1461 aa20.31■□□□□ 0.84
Trim11-203ENSMUST00000108810 Gm20521D3Z5F7 333 aa20.31■□□□□ 0.84
Trim11-203ENSMUST00000108810 NrdcQ8BHG1 1161 aa20.31■□□□□ 0.84
Trim11-203ENSMUST00000108810 Gm16486A0A1D5RMD1 1434 aa20.3■□□□□ 0.84
Trim11-203ENSMUST00000108810 Pank3Q8R2W9 370 aa20.3■□□□□ 0.84
Trim11-203ENSMUST00000108810 Ahdc1Q6PAL7 1594 aaKnown RBP20.3■□□□□ 0.84
Trim11-203ENSMUST00000108810 Ift172Q6VH22 1749 aa20.29■□□□□ 0.84
Trim11-203ENSMUST00000108810 AU022751B1B0V2 589 aa20.29■□□□□ 0.84
Trim11-203ENSMUST00000108810 Srpk2O54781 681 aaKnown RBP20.28■□□□□ 0.84
Trim11-203ENSMUST00000108810 Stard8Q8K031 1019 aa20.28■□□□□ 0.84
Trim11-203ENSMUST00000108810 Fan1Q69ZT1 1020 aa20.28■□□□□ 0.84
Trim11-203ENSMUST00000108810 Qser1A2BIE1 1698 aa20.28■□□□□ 0.84
Trim11-203ENSMUST00000108810 Usp40Q8BWR4 1235 aa20.26■□□□□ 0.83
Trim11-203ENSMUST00000108810 Inpp5dQ9ES52 1191 aa20.26■□□□□ 0.83
Trim11-203ENSMUST00000108810 Hfm1D3Z4R1 1434 aa20.25■□□□□ 0.83
Trim11-203ENSMUST00000108810 Tmf1B9EKI3 1091 aa20.25■□□□□ 0.83
Trim11-203ENSMUST00000108810 Os9Q8K2C7 672 aa20.25■□□□□ 0.83
Trim11-203ENSMUST00000108810 Arhgap23Q69ZH9 1483 aa20.25■□□□□ 0.83
Trim11-203ENSMUST00000108810 Zscan10Q3URR7 782 aa20.25■□□□□ 0.83
Trim11-203ENSMUST00000108810 Arid4bA2CG63 1314 aaKnown RBP20.24■□□□□ 0.83
Trim11-203ENSMUST00000108810 Gtf2e1Q9D0D5 440 aa20.24■□□□□ 0.83
Trim11-203ENSMUST00000108810 CltcQ68FD5 1675 aaKnown RBP20.23■□□□□ 0.83
Trim11-203ENSMUST00000108810 NpatQ8BMA5 1420 aa20.23■□□□□ 0.83
Trim11-203ENSMUST00000108810 Puf60Q3UEB3 564 aaKnown RBP20.22■□□□□ 0.83
Trim11-203ENSMUST00000108810 Kdm5aQ3UXZ9 1690 aa20.22■□□□□ 0.83
Trim11-203ENSMUST00000108810 PtprmP28828 1452 aa20.22■□□□□ 0.83
Trim11-203ENSMUST00000108810 Lrrc7Q80TE7 1490 aa20.22■□□□□ 0.83
Trim11-203ENSMUST00000108810 Slc4a1apE9PX68 744 aa20.21■□□□□ 0.83
Trim11-203ENSMUST00000108810 Rpgrip1lQ8CG73 1264 aa20.21■□□□□ 0.83
Trim11-203ENSMUST00000108810 RictorQ6QI06 1708 aa20.21■□□□□ 0.83
Trim11-203ENSMUST00000108810 Tex14Q7M6U3 1450 aa20.21■□□□□ 0.83
Trim11-203ENSMUST00000108810 PalldQ9ET54 1408 aa20.21■□□□□ 0.83
Trim11-203ENSMUST00000108810 Kif13aQ9EQW7 1749 aa20.2■□□□□ 0.82
Trim11-203ENSMUST00000108810 Itsn1Q9Z0R4 1714 aa20.2■□□□□ 0.82
Trim11-203ENSMUST00000108810 Aplp2Q06335 707 aa20.2■□□□□ 0.82
Trim11-203ENSMUST00000108810 MaddQ80U28 1577 aa20.19■□□□□ 0.82
Trim11-203ENSMUST00000108810 Fam184bQ0KK56 942 aa20.19■□□□□ 0.82
Trim11-203ENSMUST00000108810 1700123L14RikQ3V2K7 440 aa20.19■□□□□ 0.82
Trim11-203ENSMUST00000108810 Prrc2bQ7TPM1 1486 aaKnown RBP20.17■□□□□ 0.82
Trim11-203ENSMUST00000108810 Ttbk1Q6PCN3 1308 aa20.17■□□□□ 0.82
Trim11-203ENSMUST00000108810 Slc52a2Q9D8F3 450 aa20.16■□□□□ 0.82
Trim11-203ENSMUST00000108810 Afap1Q80YS6 731 aa20.15■□□□□ 0.82
Trim11-203ENSMUST00000108810 Anp32bQ9EST5 272 aaKnown RBP20.15■□□□□ 0.82
Trim11-203ENSMUST00000108810 Rsph4aQ8BYM7 716 aa20.13■□□□□ 0.81
Trim11-203ENSMUST00000108810 Q7TT23 1179 aa20.13■□□□□ 0.81
Trim11-203ENSMUST00000108810 Zscan21Q07231 555 aa20.11■□□□□ 0.81
Trim11-203ENSMUST00000108810 Arhgef28P97433 1693 aa20.1■□□□□ 0.81
Trim11-203ENSMUST00000108810 Naip7Q9JIB3 1402 aa20.1■□□□□ 0.81
Trim11-203ENSMUST00000108810 Rab3gap2Q8BMG7 1366 aa20.08■□□□□ 0.81
Trim11-203ENSMUST00000108810 SafbD3YXK2 937 aaKnown RBP20.08■□□□□ 0.8
Trim11-203ENSMUST00000108810 InsrP15208 1372 aa20.08■□□□□ 0.8
Trim11-203ENSMUST00000108810 Adamtsl3G3UXC7 1706 aa20.07■□□□□ 0.8
Trim11-203ENSMUST00000108810 Ofd1Q80Z25 1017 aa20.07■□□□□ 0.8
Trim11-203ENSMUST00000108810 Ppp2r1aQ76MZ3 589 aa20.07■□□□□ 0.8
Trim11-203ENSMUST00000108810 Gprasp1Q5U4C1 1347 aa20.06■□□□□ 0.8
Trim11-203ENSMUST00000108810 Ercc6l2Q9JIM3 1537 aa20.05■□□□□ 0.8
Trim11-203ENSMUST00000108810 Eif2ak4Q9QZ05 1648 aa20.05■□□□□ 0.8
Trim11-203ENSMUST00000108810 Zc3h13E9Q784 1729 aaKnown RBP20.05■□□□□ 0.8
Trim11-203ENSMUST00000108810 Stag3O70576 1240 aa20.04■□□□□ 0.8
Trim11-203ENSMUST00000108810 Calr4Q3TQS0 420 aa20.03■□□□□ 0.8
Trim11-203ENSMUST00000108810 Cep170bQ80U49 1574 aa20.03■□□□□ 0.8
Trim11-203ENSMUST00000108810 Dnajc5gQ8C632 165 aa20.02■□□□□ 0.79
Trim11-203ENSMUST00000108810 Atf7ipQ7TT18 1306 aa20.02■□□□□ 0.79
Trim11-203ENSMUST00000108810 Med14A2ABV5 1459 aaKnown RBP20.01■□□□□ 0.79
Trim11-203ENSMUST00000108810 Eif5bQ05D44 1216 aaKnown RBP20.01■□□□□ 0.79
Trim11-203ENSMUST00000108810 Mak16Q8BGS0 296 aaKnown RBP20.01■□□□□ 0.79
Trim11-203ENSMUST00000108810 Kif7B7ZNG0 1348 aa20.01■□□□□ 0.79
Trim11-203ENSMUST00000108810 Gm38655A0A286YDK6 273 aa20.01■□□□□ 0.79
Trim11-203ENSMUST00000108810 IqubQ8CDK3 788 aa20.01■□□□□ 0.79
Trim11-203ENSMUST00000108810 KdrP35918 1367 aa19.99■□□□□ 0.79
Trim11-203ENSMUST00000108810 CenpjQ569L8 1344 aa19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 158.3 ms