RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Pip4k2bQ80XI4 416 aa19.15■□□□□ 0.66
H2afv-201ENSMUST00000093346 Prrc2bQ7TPM1 1486 aaKnown RBP19.14■□□□□ 0.65
H2afv-201ENSMUST00000093346 Lmtk3Q5XJV6 1424 aa19.13■□□□□ 0.65
H2afv-201ENSMUST00000093346 Rprd2Q6NXI6 1469 aaKnown RBP19.13■□□□□ 0.65
H2afv-201ENSMUST00000093346 Sall3Q62255 1320 aa19.12■□□□□ 0.65
H2afv-201ENSMUST00000093346 AatkQ80YE4 1365 aa19.11■□□□□ 0.65
H2afv-201ENSMUST00000093346 Zc3h13E9Q784 1729 aaKnown RBP19.1■□□□□ 0.65
H2afv-201ENSMUST00000093346 Rock1P70335 1354 aa19.09■□□□□ 0.65
H2afv-201ENSMUST00000093346 Gm13695A2AK44 830 aa19.09■□□□□ 0.65
H2afv-201ENSMUST00000093346 P3h3Q8CG70 732 aa19.09■□□□□ 0.65
H2afv-201ENSMUST00000093346 Eif2ak4Q9QZ05 1648 aa19.09■□□□□ 0.65
H2afv-201ENSMUST00000093346 PplQ9R269 1755 aa19.09■□□□□ 0.65
H2afv-201ENSMUST00000093346 Myo3aQ8K3H5 1613 aa19.07■□□□□ 0.64
H2afv-201ENSMUST00000093346 Psme1P97371 249 aa19.07■□□□□ 0.64
H2afv-201ENSMUST00000093346 Eid3Q3V124 375 aa19.07■□□□□ 0.64
H2afv-201ENSMUST00000093346 Iqgap1Q9JKF1 1657 aaKnown RBP19.07■□□□□ 0.64
H2afv-201ENSMUST00000093346 PalldQ9ET54 1408 aa19.06■□□□□ 0.64
H2afv-201ENSMUST00000093346 Mroh3A0A1D5RM54 893 aa19.05■□□□□ 0.64
H2afv-201ENSMUST00000093346 Nrxn3Q6P9K9 1571 aa19.05■□□□□ 0.64
H2afv-201ENSMUST00000093346 Usp47Q8BY87 1376 aa19.05■□□□□ 0.64
H2afv-201ENSMUST00000093346 Med1Q925J9 1575 aa19.04■□□□□ 0.64
H2afv-201ENSMUST00000093346 Plxnc1Q9QZC2 1574 aa19.04■□□□□ 0.64
H2afv-201ENSMUST00000093346 Rapgef3Q8VCC8 918 aa19.03■□□□□ 0.64
H2afv-201ENSMUST00000093346 Washc2Q6PGL7 1334 aa19.02■□□□□ 0.64
H2afv-201ENSMUST00000093346 Arhgef28P97433 1693 aa19.01■□□□□ 0.63
H2afv-201ENSMUST00000093346 Myom1Q62234 1667 aaKnown RBP18.99■□□□□ 0.63
H2afv-201ENSMUST00000093346 Slit3Q9WVB4 1523 aa18.99■□□□□ 0.63
H2afv-201ENSMUST00000093346 PzpQ61838 1495 aa18.98■□□□□ 0.63
H2afv-201ENSMUST00000093346 Rims1Q99NE5 1463 aa18.97■□□□□ 0.63
H2afv-201ENSMUST00000093346 Setd1aE9PYH6 1716 aa18.97■□□□□ 0.63
H2afv-201ENSMUST00000093346 Tulp4Q9JIL5 1547 aa18.97■□□□□ 0.63
H2afv-201ENSMUST00000093346 Gli3Q61602 1583 aa18.97■□□□□ 0.63
H2afv-201ENSMUST00000093346 AU022751B1B0V2 589 aa18.96■□□□□ 0.63
H2afv-201ENSMUST00000093346 Rgl3Q3UYI5 709 aa18.96■□□□□ 0.63
H2afv-201ENSMUST00000093346 Atp1b4Q99ME6 356 aa18.96■□□□□ 0.63
H2afv-201ENSMUST00000093346 Hspa5P20029 655 aaKnown RBP18.95■□□□□ 0.62
H2afv-201ENSMUST00000093346 Tubgcp6G5E8P0 1769 aa18.92■□□□□ 0.62
H2afv-201ENSMUST00000093346 IghaA0A0A6YXW6 389 aa18.92■□□□□ 0.62
H2afv-201ENSMUST00000093346 Adamts13Q769J6 1426 aa18.91■□□□□ 0.62
H2afv-201ENSMUST00000093346 Thsd7aQ69ZU6 1645 aa18.9■□□□□ 0.62
H2afv-201ENSMUST00000093346 Shq1Q7TMX5 569 aa18.9■□□□□ 0.62
H2afv-201ENSMUST00000093346 Pik3r4Q8VD65 1358 aa18.9■□□□□ 0.62
H2afv-201ENSMUST00000093346 Q9D9H8 365 aa18.89■□□□□ 0.61
H2afv-201ENSMUST00000093346 Asxl2Q8BZ32 1370 aa18.89■□□□□ 0.61
H2afv-201ENSMUST00000093346 Cdk13Q69ZA1 1511 aaKnown RBP18.88■□□□□ 0.61
H2afv-201ENSMUST00000093346 MaddQ80U28 1577 aa18.88■□□□□ 0.61
H2afv-201ENSMUST00000093346 Cep152A2AUM9 1736 aaKnown RBP18.87■□□□□ 0.61
H2afv-201ENSMUST00000093346 Ifit1bl1D3Z6F0 470 aa18.87■□□□□ 0.61
H2afv-201ENSMUST00000093346 Slc52a2Q9D8F3 450 aa18.87■□□□□ 0.61
H2afv-201ENSMUST00000093346 Arap3Q8R5G7 1538 aa18.86■□□□□ 0.61
H2afv-201ENSMUST00000093346 Srpk2O54781 681 aaKnown RBP18.83■□□□□ 0.6
H2afv-201ENSMUST00000093346 Os9Q8K2C7 672 aa18.82■□□□□ 0.6
H2afv-201ENSMUST00000093346 Tns3Q5SSZ5 1440 aa18.82■□□□□ 0.6
H2afv-201ENSMUST00000093346 Kdm2aP59997 1161 aa18.81■□□□□ 0.6
H2afv-201ENSMUST00000093346 Grwd1Q810D6 446 aaKnown RBP18.8■□□□□ 0.6
H2afv-201ENSMUST00000093346 Cps1Q8C196 1500 aa18.79■□□□□ 0.6
H2afv-201ENSMUST00000093346 Fan1Q69ZT1 1020 aa18.78■□□□□ 0.6
H2afv-201ENSMUST00000093346 Polr3aB2RXC6 1390 aa18.78■□□□□ 0.6
H2afv-201ENSMUST00000093346 Iqsec2Q5DU25 1478 aa18.77■□□□□ 0.6
H2afv-201ENSMUST00000093346 Gm20521D3Z5F7 333 aa18.76■□□□□ 0.59
H2afv-201ENSMUST00000093346 Lrrc7Q80TE7 1490 aa18.76■□□□□ 0.59
H2afv-201ENSMUST00000093346 Cpsf1Q9EPU4 1441 aaKnown RBP18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 Unc13bQ9Z1N9 1602 aa18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 Cdk5rap2Q8K389 1822 aa18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 NefmP08553 848 aa18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 Puf60Q3UEB3 564 aaKnown RBP18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 Fbxo41Q6NS60 873 aa18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 Col18a1P39061 1774 aa18.75■□□□□ 0.59
H2afv-201ENSMUST00000093346 Neurod1Q60867 357 aa18.74■□□□□ 0.59
H2afv-201ENSMUST00000093346 Utp14aQ640M1 767 aaKnown RBP18.73■□□□□ 0.59
H2afv-201ENSMUST00000093346 HnrnpmQ9D0E1 729 aaKnown RBP18.73■□□□□ 0.59
H2afv-201ENSMUST00000093346 Mbd5B1AYB6 1498 aa18.72■□□□□ 0.59
H2afv-201ENSMUST00000093346 Stk26Q99JT2 416 aa18.71■□□□□ 0.59
H2afv-201ENSMUST00000093346 Ift172Q6VH22 1749 aa18.71■□□□□ 0.59
H2afv-201ENSMUST00000093346 Plekhg1F6S200 1446 aa18.7■□□□□ 0.58
H2afv-201ENSMUST00000093346 Mug2P28666 1451 aa18.7■□□□□ 0.58
H2afv-201ENSMUST00000093346 Hspa1lP16627 641 aa18.69■□□□□ 0.58
H2afv-201ENSMUST00000093346 Acin1Q9JIX8 1338 aaKnown RBP18.68■□□□□ 0.58
H2afv-201ENSMUST00000093346 Tmem94Q7TSH8 1360 aa18.68■□□□□ 0.58
H2afv-201ENSMUST00000093346 Slain2Q8CI08 581 aa18.67■□□□□ 0.58
H2afv-201ENSMUST00000093346 Bcl11bQ99PV8 884 aa18.67■□□□□ 0.58
H2afv-201ENSMUST00000093346 Sipa1l1Q8C0T5 1782 aa18.66■□□□□ 0.58
H2afv-201ENSMUST00000093346 Evi5lH3BKQ3 813 aa18.66■□□□□ 0.58
H2afv-201ENSMUST00000093346 IqubQ8CDK3 788 aa18.66■□□□□ 0.58
H2afv-201ENSMUST00000093346 Nwd1A6H603 1563 aa18.66■□□□□ 0.58
H2afv-201ENSMUST00000093346 Cep170bQ80U49 1574 aa18.66■□□□□ 0.58
H2afv-201ENSMUST00000093346 TonslQ6NZL6 1363 aa18.66■□□□□ 0.58
H2afv-201ENSMUST00000093346 DnmbpQ6TXD4 1580 aa18.65■□□□□ 0.58
H2afv-201ENSMUST00000093346 Amigo3Q8C2S7 508 aa18.65■□□□□ 0.58
H2afv-201ENSMUST00000093346 Col14a1Q80X19 1797 aa18.65■□□□□ 0.58
H2afv-201ENSMUST00000093346 Rreb1Q3UH06 1700 aaKnown RBP18.63■□□□□ 0.57
H2afv-201ENSMUST00000093346 Brinp3Q499E0 766 aa18.63■□□□□ 0.57
H2afv-201ENSMUST00000093346 Usp40Q8BWR4 1235 aa18.62■□□□□ 0.57
H2afv-201ENSMUST00000093346 Stard8Q8K031 1019 aa18.62■□□□□ 0.57
H2afv-201ENSMUST00000093346 Nphp4P59240 1425 aa18.62■□□□□ 0.57
H2afv-201ENSMUST00000093346 Itsn2Q9Z0R6 1659 aa18.62■□□□□ 0.57
H2afv-201ENSMUST00000093346 NalcnQ8BXR5 1738 aa18.62■□□□□ 0.57
H2afv-201ENSMUST00000093346 Kif20bQ80WE4 1774 aaKnown RBP18.6■□□□□ 0.57
H2afv-201ENSMUST00000093346 RalgapbQ8BQZ4 1484 aa18.6■□□□□ 0.57
H2afv-201ENSMUST00000093346 Stag3O70576 1240 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms