RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Ccdc183A2AJB1 534 aa21.34■■□□□ 1.01
Ptpre-201ENSMUST00000073961 Mical1Q8VDP3 1048 aa21.34■■□□□ 1.01
Ptpre-201ENSMUST00000073961 Cc2d1aQ8K1A6 943 aa21.34■■□□□ 1.01
Ptpre-201ENSMUST00000073961 Tpm1P58771 284 aa21.33■■□□□ 1.01
Ptpre-201ENSMUST00000073961 Gnai1B2RSH2 354 aa21.33■■□□□ 1
Ptpre-201ENSMUST00000073961 Gnai3Q9DC51 354 aa21.33■■□□□ 1
Ptpre-201ENSMUST00000073961 Q8BT18 775 aa21.33■■□□□ 1
Ptpre-201ENSMUST00000073961 Smc4Q8CG47 1286 aa21.32■■□□□ 1
Ptpre-201ENSMUST00000073961 Tceal9Q9DD24 104 aa21.32■■□□□ 1
Ptpre-201ENSMUST00000073961 Shroom4Q1W617 1475 aa21.32■■□□□ 1
Ptpre-201ENSMUST00000073961 PnisrA2AJT4 805 aaKnown RBP21.32■■□□□ 1
Ptpre-201ENSMUST00000073961 Ddx11Q6AXC6 880 aa21.32■■□□□ 1
Ptpre-201ENSMUST00000073961 Ggt6Q6PDE7 497 aa21.32■■□□□ 1
Ptpre-201ENSMUST00000073961 Rnf20Q5DTM8 973 aa21.31■■□□□ 1
Ptpre-201ENSMUST00000073961 Ttll13A4Q9F6 804 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 Ric3Q8BPM6 367 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 Pank1Q8K4K6 548 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 AppP12023 770 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 Cplx2P84086 134 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 Evc2Q8K1G2 1220 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 Gm21969J3QJZ1 289 aa21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 KarsQ99MN1 595 aaKnown RBP21.3■■□□□ 1
Ptpre-201ENSMUST00000073961 Top2aQ01320 1528 aaKnown RBP21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Phactr2B1AVP0 632 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Fbxo2Q80UW2 297 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Usp16Q99LG0 825 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Ift140E9PY46 1464 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Ccdc173A0JLY1 547 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 A0A1L1SQF0 893 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Hmgn5Q9JL35 406 aa21.29■■□□□ 1
Ptpre-201ENSMUST00000073961 Tpm2P58774 284 aa21.28■■□□□ 1
Ptpre-201ENSMUST00000073961 Taf3Q5HZG4 932 aa21.28■■□□□ 1
Ptpre-201ENSMUST00000073961 Smc3Q9CW03 1217 aaKnown RBP21.28■■□□□ 1
Ptpre-201ENSMUST00000073961 Swt1Q9DBQ9 907 aa21.28■■□□□ 1
Ptpre-201ENSMUST00000073961 Bicd2Q921C5 820 aa21.28■■□□□ 1
Ptpre-201ENSMUST00000073961 Rbm25B2RY56 838 aaKnown RBP21.27■■□□□ 1
Ptpre-201ENSMUST00000073961 Q9D2X8 372 aa21.27■■□□□ 1
Ptpre-201ENSMUST00000073961 Gabpb2P81069 414 aa21.26■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Tpm4Q6IRU2 248 aa21.26■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Pak3Q61036 559 aa21.25■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Ppp2r3aB2RXC8 1150 aa21.25■□□□□ 0.99
Ptpre-201ENSMUST00000073961 PhaxQ9JJT9 385 aaKnown RBP21.25■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Iqgap2Q3UQ44 1575 aa21.24■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Cc2d2aQ8CFW7 1633 aa21.24■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Polr3gQ6NXY9 223 aa21.24■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Slc4a2P13808 1237 aaKnown RBP21.24■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Ncapd3Q6ZQK0 1506 aa21.24■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Ipo7Q9EPL8 1038 aaKnown RBP21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Gsto1O09131 240 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Ccdc34Q3UI66 367 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Tomm22Q9CPQ3 142 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Erc2Q6PH08 957 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Jph4Q80WT0 628 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Ccdc171E9Q1U1 1324 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Naip1Q9QWK5 1403 aa21.23■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Rec8Q8C5S7 591 aa21.22■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Mcm2P97310 904 aa21.22■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Pdcl3Q8BVF2 240 aa21.22■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Efcab5A0JP43 1406 aa21.22■□□□□ 0.99
Ptpre-201ENSMUST00000073961 EzrP26040 586 aaKnown RBP21.22■□□□□ 0.99
Ptpre-201ENSMUST00000073961 ScribQ80U72 1612 aa21.22■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Hmox1P14901 289 aa21.21■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Rab3gap2Q8BMG7 1366 aa21.21■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Cchcr1Q8K2I2 770 aa21.21■□□□□ 0.99
Ptpre-201ENSMUST00000073961 Nek4Q9Z1J2 792 aa21.21■□□□□ 0.99
Ptpre-201ENSMUST00000073961 SkilQ60665 675 aa21.2■□□□□ 0.98
Ptpre-201ENSMUST00000073961 BccipQ9CWI3 316 aa21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Ppp2r1aQ76MZ3 589 aa21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Cyp46a1Q9WVK8 500 aa21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Cplx1P63040 134 aa21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Zfp444Q3TDV8 331 aaKnown RBP21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Drc7Q6V3W6 876 aa21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Hook1Q8BIL5 728 aa21.19■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Gm21190A0A0G2JGJ6 266 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Prdm16A2A935 1275 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Chmp7Q8R1T1 451 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Kif3aP28741 701 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Gsdma3Q5Y4Y6 464 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Soga1E1U8D0 1418 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Gpatch3Q8BIY1 525 aa21.18■□□□□ 0.98
Ptpre-201ENSMUST00000073961 1700010I14RikQ7TPG0 532 aa21.17■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Pknox2Q8BG99 474 aa21.17■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Puf60Q3UEB3 564 aaKnown RBP21.17■□□□□ 0.98
Ptpre-201ENSMUST00000073961 PogkQ80TC5 607 aa21.17■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Q7TT23 1179 aa21.17■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Ftsj3Q9DBE9 838 aaKnown RBP21.17■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Kri1Q8VDQ9 704 aaKnown RBP21.16■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Nectin2P32507 530 aa21.16■□□□□ 0.98
Ptpre-201ENSMUST00000073961 FanciQ8K368 1330 aa21.16■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Pde4cQ3UEI1 686 aa21.16■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Krt82Q99M74 516 aa21.16■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Myom3A2ABU4 1439 aa21.15■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Zfp644E9QA22 1323 aa21.15■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Ints3Q7TPD0 1041 aaKnown RBP21.15■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Dixdc1Q80Y83 711 aa21.15■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Arhgef5E9Q7D5 1581 aa21.14■□□□□ 0.98
Ptpre-201ENSMUST00000073961 Nutm1Q8BHP2 1126 aa21.13■□□□□ 0.97
Ptpre-201ENSMUST00000073961 Mad1l1Q9WTX8 717 aaKnown RBP21.13■□□□□ 0.97
Ptpre-201ENSMUST00000073961 Sv2bQ8BG39 683 aa21.13■□□□□ 0.97
Ptpre-201ENSMUST00000073961 Washc2Q6PGL7 1334 aa21.13■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms