RNA–Protein interactions for RNA: ENSMUST00000063249.8

Xrcc1-201, Transcript of DNA repair protein XRCC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1-201ENSMUST00000063249 Acin1Q9JIX8 1338 aaKnown RBP21.29■■□□□ 1
Xrcc1-201ENSMUST00000063249 Washc2Q6PGL7 1334 aa21.28■■□□□ 1
Xrcc1-201ENSMUST00000063249 Gemin5Q8BX17 1502 aaKnown RBP21.27■■□□□ 1
Xrcc1-201ENSMUST00000063249 Scaf11E9PZM7 1456 aaKnown RBP21.26■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Phlpp1Q8CHE4 1687 aa21.24■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Mroh3A0A1D5RM54 893 aa21.24■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Txndc2Q6P902 515 aa21.24■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Ncoa1P70365 1447 aa21.23■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Rims2Q9EQZ7 1530 aa21.22■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Arid4bA2CG63 1314 aaKnown RBP21.22■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Rgl3Q3UYI5 709 aa21.21■□□□□ 0.99
Xrcc1-201ENSMUST00000063249 Zc3h13E9Q784 1729 aaKnown RBP21.2■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 PplQ9R269 1755 aa21.2■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 NefmP08553 848 aa21.19■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 AU022751B1B0V2 589 aa21.19■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Plxnc1Q9QZC2 1574 aa21.18■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Eif2ak4Q9QZ05 1648 aa21.18■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 P3h3Q8CG70 732 aa21.18■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Adamts13Q769J6 1426 aa21.18■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Tulp4Q9JIL5 1547 aa21.18■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Ltbp4Q8K4G1 1666 aa21.17■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Lmtk3Q5XJV6 1424 aa21.16■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Psme1P97371 249 aa21.16■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Myom1Q62234 1667 aaKnown RBP21.16■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Rims1Q99NE5 1463 aa21.16■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Myo3aQ8K3H5 1613 aa21.15■□□□□ 0.98
Xrcc1-201ENSMUST00000063249 Pip4k2bQ80XI4 416 aa21.13■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 PalldQ9ET54 1408 aa21.12■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 Gm13695A2AK44 830 aa21.12■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 Arhgef28P97433 1693 aa21.1■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 IghaA0A0A6YXW6 389 aa21.09■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 Ifit1bl1D3Z6F0 470 aa21.09■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 Slit3Q9WVB4 1523 aa21.08■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 Iqgap1Q9JKF1 1657 aaKnown RBP21.08■□□□□ 0.97
Xrcc1-201ENSMUST00000063249 Setd1aE9PYH6 1716 aa21.07■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Nrxn3Q6P9K9 1571 aa21.07■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Med1Q925J9 1575 aa21.06■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Cdk13Q69ZA1 1511 aaKnown RBP21.06■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Atp1b4Q99ME6 356 aa21.06■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Grwd1Q810D6 446 aaKnown RBP21.05■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Cep152A2AUM9 1736 aaKnown RBP21.05■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Asxl2Q8BZ32 1370 aa21.04■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 TonslQ6NZL6 1363 aa21.04■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Shq1Q7TMX5 569 aa21.03■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Rapgef3Q8VCC8 918 aa21.03■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Polr3aB2RXC6 1390 aa21.03■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Q9D9H8 365 aa21.02■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 PzpQ61838 1495 aa21.02■□□□□ 0.96
Xrcc1-201ENSMUST00000063249 Neurod1Q60867 357 aa21.02■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Slc52a2Q9D8F3 450 aa21.01■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Mbd5B1AYB6 1498 aa21.01■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Kdm2aP59997 1161 aa21■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Cpsf1Q9EPU4 1441 aaKnown RBP21■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 MaddQ80U28 1577 aa21■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Srpk2O54781 681 aaKnown RBP20.98■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Mug2P28666 1451 aa20.97■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Os9Q8K2C7 672 aa20.96■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Thsd7aQ69ZU6 1645 aa20.96■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Pik3r4Q8VD65 1358 aa20.95■□□□□ 0.95
Xrcc1-201ENSMUST00000063249 Fan1Q69ZT1 1020 aa20.95■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Tubgcp6G5E8P0 1769 aa20.94■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Arap3Q8R5G7 1538 aa20.94■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Cdk5rap2Q8K389 1822 aa20.94■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Gm20521D3Z5F7 333 aa20.94■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Gli3Q61602 1583 aa20.93■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Puf60Q3UEB3 564 aaKnown RBP20.92■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Lrrc7Q80TE7 1490 aa20.91■□□□□ 0.94
Xrcc1-201ENSMUST00000063249 Cps1Q8C196 1500 aa20.86■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 Dapk1Q80YE7 1442 aa20.85■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 Stk26Q99JT2 416 aa20.85■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 Sipa1l1Q8C0T5 1782 aa20.85■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 Tns3Q5SSZ5 1440 aa20.84■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 Utp14aQ640M1 767 aaKnown RBP20.83■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 HnrnpmQ9D0E1 729 aaKnown RBP20.83■□□□□ 0.93
Xrcc1-201ENSMUST00000063249 RalgapbQ8BQZ4 1484 aa20.82■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Ppargc1bQ8VHJ7 1014 aa20.82■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 DnmbpQ6TXD4 1580 aa20.81■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Cep170bQ80U49 1574 aa20.81■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Usp40Q8BWR4 1235 aa20.8■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Plekhg1F6S200 1446 aa20.8■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Rundc1Q0VDN7 615 aa20.8■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Ift172Q6VH22 1749 aa20.79■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Nphp4P59240 1425 aa20.79■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Col18a1P39061 1774 aa20.78■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 IqubQ8CDK3 788 aa20.78■□□□□ 0.92
Xrcc1-201ENSMUST00000063249 Card11Q8CIS0 1159 aa20.76■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Stard8Q8K031 1019 aa20.76■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Unc13bQ9Z1N9 1602 aa20.76■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Rpgrip1Q9EPQ2 1331 aa20.74■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Stag3O70576 1240 aa20.74■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Las1lA2BE28 776 aaKnown RBP20.73■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Gtf2e1Q9D0D5 440 aa20.73■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Tmem94Q7TSH8 1360 aa20.73■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Amigo3Q8C2S7 508 aa20.72■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Srcin1Q9QWI6 1250 aa20.72■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Itsn2Q9Z0R6 1659 aa20.71■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Slain2Q8CI08 581 aa20.7■□□□□ 0.91
Xrcc1-201ENSMUST00000063249 Usp32F8VPZ3 1604 aa20.7■□□□□ 0.9
Xrcc1-201ENSMUST00000063249 Nwd1A6H603 1563 aa20.7■□□□□ 0.9
Xrcc1-201ENSMUST00000063249 Rreb1Q3UH06 1700 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 134.7 ms