RNA–Protein interactions for RNA: ENSMUST00000054990.10

Trim2-201, Transcript of Tripartite motif-containing protein 2, mousemouse

TSL 1 (best) BASIC

Gene Trim2, Length 3,816 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim2-201ENSMUST00000054990 Atxn3Q9CVD2 355 aa11.61□□□□□ -0.55
Trim2-201ENSMUST00000054990 Camsap2Q8C1B1 1461 aa11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 WizO88286 1684 aaKnown RBP11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 Myom3A2ABU4 1439 aa11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 Grin2aP35436 1464 aa11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 PxdnQ3UQ28 1475 aa11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 Ccdc146E9Q9F7 977 aa11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 Rprd2Q6NXI6 1469 aaKnown RBP11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 Q4VA45 678 aa11.6□□□□□ -0.55
Trim2-201ENSMUST00000054990 Pde4cQ3UEI1 686 aa11.59□□□□□ -0.55
Trim2-201ENSMUST00000054990 Map7O88735 730 aa11.59□□□□□ -0.55
Trim2-201ENSMUST00000054990 Zcchc11B2RX14 1644 aaKnown RBP11.59□□□□□ -0.55
Trim2-201ENSMUST00000054990 Cul7Q8VE73 1689 aa11.59□□□□□ -0.55
Trim2-201ENSMUST00000054990 Adamts12Q811B3 1600 aa11.59□□□□□ -0.55
Trim2-201ENSMUST00000054990 GsdmaQ9EST1 446 aa11.58□□□□□ -0.56
Trim2-201ENSMUST00000054990 Disp1Q3TDN0 1521 aa11.57□□□□□ -0.56
Trim2-201ENSMUST00000054990 Cc2d1aQ8K1A6 943 aa11.57□□□□□ -0.56
Trim2-201ENSMUST00000054990 Gcc2Q8CHG3 1679 aa11.57□□□□□ -0.56
Trim2-201ENSMUST00000054990 Pknox2Q8BG99 474 aa11.57□□□□□ -0.56
Trim2-201ENSMUST00000054990 Cd109Q8R422 1442 aa11.57□□□□□ -0.56
Trim2-201ENSMUST00000054990 Trim58Q5NCC9 485 aa11.56□□□□□ -0.56
Trim2-201ENSMUST00000054990 Mink1Q9JM52 1308 aa11.55□□□□□ -0.56
Trim2-201ENSMUST00000054990 Ccar1Q8CH18 1146 aaKnown RBP11.55□□□□□ -0.56
Trim2-201ENSMUST00000054990 Dhx57Q6P5D3 1388 aaKnown RBP11.55□□□□□ -0.56
Trim2-201ENSMUST00000054990 Gas2l2Q5SSG4 860 aa11.55□□□□□ -0.56
Trim2-201ENSMUST00000054990 Plekhh1Q80TI1 1356 aa11.55□□□□□ -0.56
Trim2-201ENSMUST00000054990 Fhod3Q76LL6 1578 aa11.55□□□□□ -0.56
Trim2-201ENSMUST00000054990 KnstrnQ9D9Z1 312 aaKnown RBP11.54□□□□□ -0.56
Trim2-201ENSMUST00000054990 Abca16E9PWJ7 1678 aa11.54□□□□□ -0.56
Trim2-201ENSMUST00000054990 Tnnt1O88346 262 aa11.54□□□□□ -0.56
Trim2-201ENSMUST00000054990 Arhgef40Q3UPH7 1517 aa11.53□□□□□ -0.56
Trim2-201ENSMUST00000054990 Adgrb2Q8CGM1 1561 aa11.53□□□□□ -0.56
Trim2-201ENSMUST00000054990 Ralbp1Q62172 648 aa11.53□□□□□ -0.56
Trim2-201ENSMUST00000054990 Lemd3Q9WU40 921 aa11.53□□□□□ -0.56
Trim2-201ENSMUST00000054990 Hsp90b1P08113 802 aaKnown RBP11.53□□□□□ -0.56
Trim2-201ENSMUST00000054990 Kank1E9Q238 1360 aa11.53□□□□□ -0.56
Trim2-201ENSMUST00000054990 Ylpm1Q9R0I7 1386 aaKnown RBP11.52□□□□□ -0.57
Trim2-201ENSMUST00000054990 Rab3gap2Q8BMG7 1366 aa11.51□□□□□ -0.57
Trim2-201ENSMUST00000054990 G3bp1P97855 465 aaKnown RBP11.5□□□□□ -0.57
Trim2-201ENSMUST00000054990 Zranb1Q7M760 708 aa11.5□□□□□ -0.57
Trim2-201ENSMUST00000054990 Neo1P97798 1493 aa11.5□□□□□ -0.57
Trim2-201ENSMUST00000054990 Setbp1Q9Z180 1582 aa11.5□□□□□ -0.57
Trim2-201ENSMUST00000054990 Ipo4Q8VI75 1082 aa11.49□□□□□ -0.57
Trim2-201ENSMUST00000054990 Puf60Q3UEB3 564 aaKnown RBP11.49□□□□□ -0.57
Trim2-201ENSMUST00000054990 Smc5Q8CG46 1101 aaKnown RBP11.49□□□□□ -0.57
Trim2-201ENSMUST00000054990 Aplp1Q03157 653 aa11.49□□□□□ -0.57
Trim2-201ENSMUST00000054990 Kdm6bQ5NCY0 1641 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Rabep1O35551 862 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Il16O54824 1322 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Pcmtd1P59913 357 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Utp14aQ640M1 767 aaKnown RBP11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Cog6Q8R3I3 657 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Ppp2r3aB2RXC8 1150 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Pik3c2gO70167 1506 aa11.48□□□□□ -0.57
Trim2-201ENSMUST00000054990 Ubap1lG3UW59 384 aa11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Arhgap5P97393 1501 aa11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Sox12Q04890 314 aa11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Cdk13Q69ZA1 1511 aaKnown RBP11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Triml2E9PW10 424 aa11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Nkx1-2P42580 305 aa11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Nol12Q8BG17 217 aa11.47□□□□□ -0.57
Trim2-201ENSMUST00000054990 Mug2P28666 1451 aa11.46□□□□□ -0.57
Trim2-201ENSMUST00000054990 Shq1Q7TMX5 569 aa11.46□□□□□ -0.57
Trim2-201ENSMUST00000054990 Ssh1Q76I79 1042 aa11.46□□□□□ -0.58
Trim2-201ENSMUST00000054990 Nek4Q9Z1J2 792 aa11.46□□□□□ -0.58
Trim2-201ENSMUST00000054990 Dusp27Q148W8 1138 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Nup160Q9Z0W3 1402 aaKnown RBP11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Abcc2Q8VI47 1543 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Magi1Q6RHR9 1471 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Cdc42bpaQ3UU96 1719 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Ccdc141E9Q8Q6 1531 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rbm25B2RY56 838 aaKnown RBP11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Fam163aQ8CAA5 168 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 SphkapQ6NSW3 1687 aa11.45□□□□□ -0.58
Trim2-201ENSMUST00000054990 Paxip1Q6NZQ4 1056 aa11.44□□□□□ -0.58
Trim2-201ENSMUST00000054990 Samd1D3YXK1 519 aa11.44□□□□□ -0.58
Trim2-201ENSMUST00000054990 Sptbn5F6UCX4 1208 aa11.44□□□□□ -0.58
Trim2-201ENSMUST00000054990 Tfip11Q9ERA6 838 aaKnown RBP11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Gpatch11Q3UFS4 262 aa11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rapgef6Q5NCJ1 1609 aa11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Pnmal2G3X9N3 661 aa11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rnf214Q8BFU3 668 aaKnown RBP11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Pprc1Q6NZN1 1644 aa11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Trappc8E9PWG2 1437 aa11.43□□□□□ -0.58
Trim2-201ENSMUST00000054990 Arhgef11Q68FM7 1552 aa11.42□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rfx7F8VPJ6 1459 aa11.42□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rusc2Q80U22 1514 aa11.42□□□□□ -0.58
Trim2-201ENSMUST00000054990 Wdr7Q920I9 1489 aa11.42□□□□□ -0.58
Trim2-201ENSMUST00000054990 Prex2Q3LAC4 1598 aa11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 ErbinQ80TH2 1402 aa11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 Casc1Q6TDU8 730 aa11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rsph3aQ3UFY4 516 aa11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 Ppp1r9bQ6R891 817 aaKnown RBP11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 Duxf3A0A0N4SV92 674 aa11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 Kif18aQ91WD7 886 aa11.41□□□□□ -0.58
Trim2-201ENSMUST00000054990 Maco1Q7TQE6 664 aaKnown RBP11.4□□□□□ -0.58
Trim2-201ENSMUST00000054990 Adcy10Q8C0T9 1614 aa11.4□□□□□ -0.58
Trim2-201ENSMUST00000054990 Rbm10Q99KG3 930 aaKnown RBP11.4□□□□□ -0.59
Trim2-201ENSMUST00000054990 Polr3aB2RXC6 1390 aa11.4□□□□□ -0.59
Trim2-201ENSMUST00000054990 Usp16Q99LG0 825 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 152.2 ms