RNA–Protein interactions for RNA: ENSMUST00000054990.10

Trim2-201, Transcript of Tripartite motif-containing protein 2, mousemouse

TSL 1 (best) BASIC

Gene Trim2, Length 3,816 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim2-201ENSMUST00000054990 Rhox8Q6VSS7 320 aa16.46■□□□□ 0.23
Trim2-201ENSMUST00000054990 Gm35339A0A140LHH9 1649 aa16.22■□□□□ 0.19
Trim2-201ENSMUST00000054990 NischQ80TM9 1593 aa15.79■□□□□ 0.12
Trim2-201ENSMUST00000054990 Ehmt2Q9Z148 1263 aaKnown RBP15.63■□□□□ 0.09
Trim2-201ENSMUST00000054990 Abcc9P70170 1546 aa15.36■□□□□ 0.05
Trim2-201ENSMUST00000054990 Ccdc136Q3TVA9 1136 aa15.05■□□□□ -0
Trim2-201ENSMUST00000054990 Abcc8B2RUS7 1588 aa15.03■□□□□ -0
Trim2-201ENSMUST00000054990 Rpgrip1Q9EPQ2 1331 aa15.01□□□□□ -0.01
Trim2-201ENSMUST00000054990 Acin1Q9JIX8 1338 aaKnown RBP14.67□□□□□ -0.06
Trim2-201ENSMUST00000054990 Zeb1Q64318 1117 aa14.62□□□□□ -0.07
Trim2-201ENSMUST00000054990 Gab3Q8BSM5 595 aa14.61□□□□□ -0.07
Trim2-201ENSMUST00000054990 Trim41Q5NCC3 630 aa14.58□□□□□ -0.08
Trim2-201ENSMUST00000054990 Rtl1Q7M732 1744 aa14.51□□□□□ -0.09
Trim2-201ENSMUST00000054990 ScribQ80U72 1612 aa14.51□□□□□ -0.09
Trim2-201ENSMUST00000054990 Pcgf6Q99NA9 353 aa14.48□□□□□ -0.09
Trim2-201ENSMUST00000054990 Cngb1E1AZ71 1325 aa14.46□□□□□ -0.09
Trim2-201ENSMUST00000054990 Ccdc180J3QNE4 1664 aa14.39□□□□□ -0.11
Trim2-201ENSMUST00000054990 Wdr66E9Q743 1299 aa14.33□□□□□ -0.12
Trim2-201ENSMUST00000054990 Supt5hO55201 1082 aaKnown RBP14.29□□□□□ -0.12
Trim2-201ENSMUST00000054990 Ppargc1bQ8VHJ7 1014 aa14.18□□□□□ -0.14
Trim2-201ENSMUST00000054990 HrcG5E8J6 738 aa14.18□□□□□ -0.14
Trim2-201ENSMUST00000054990 Esf1Q3V1V3 845 aaKnown RBP14.17□□□□□ -0.14
Trim2-201ENSMUST00000054990 UbtfP25976 765 aaKnown RBP14.08□□□□□ -0.16
Trim2-201ENSMUST00000054990 Dcaf1Q80TR8 1506 aa14.08□□□□□ -0.16
Trim2-201ENSMUST00000054990 Myt1lP97500 1187 aa14.07□□□□□ -0.16
Trim2-201ENSMUST00000054990 Las1lA2BE28 776 aaKnown RBP14.02□□□□□ -0.17
Trim2-201ENSMUST00000054990 Zcchc6Q5BLK4 1491 aaKnown RBP14.02□□□□□ -0.17
Trim2-201ENSMUST00000054990 Neurod1Q60867 357 aa13.92□□□□□ -0.18
Trim2-201ENSMUST00000054990 NefmP08553 848 aa13.86□□□□□ -0.19
Trim2-201ENSMUST00000054990 Mier1Q5UAK0 511 aa13.86□□□□□ -0.19
Trim2-201ENSMUST00000054990 Npm2Q80W85 207 aa13.85□□□□□ -0.19
Trim2-201ENSMUST00000054990 Rb1cc1Q9ESK9 1588 aa13.84□□□□□ -0.19
Trim2-201ENSMUST00000054990 Kdm5dQ62240 1548 aa13.79□□□□□ -0.2
Trim2-201ENSMUST00000054990 Sall2Q9QX96 1004 aa13.76□□□□□ -0.21
Trim2-201ENSMUST00000054990 Chic1Q8CBW7 227 aa13.76□□□□□ -0.21
Trim2-201ENSMUST00000054990 Gm38655A0A286YDK6 273 aa13.75□□□□□ -0.21
Trim2-201ENSMUST00000054990 Cdk11bP24788 784 aaKnown RBP13.69□□□□□ -0.22
Trim2-201ENSMUST00000054990 Baz1aO88379 1555 aa13.67□□□□□ -0.22
Trim2-201ENSMUST00000054990 Nop58Q6DFW4 536 aaKnown RBP13.66□□□□□ -0.22
Trim2-201ENSMUST00000054990 Csrnp3P59055 597 aa13.64□□□□□ -0.23
Trim2-201ENSMUST00000054990 NacadQ5SWP3 1504 aa13.63□□□□□ -0.23
Trim2-201ENSMUST00000054990 Ube2uB1AUC4 352 aa13.62□□□□□ -0.23
Trim2-201ENSMUST00000054990 Ap3b1Q9Z1T1 1105 aa13.6□□□□□ -0.23
Trim2-201ENSMUST00000054990 CenpbP27790 599 aa13.6□□□□□ -0.23
Trim2-201ENSMUST00000054990 Slc24a1Q91WD8 1130 aa13.59□□□□□ -0.23
Trim2-201ENSMUST00000054990 Il27Q8K3I6 234 aa13.55□□□□□ -0.24
Trim2-201ENSMUST00000054990 Mapk8ip2Q9ERE9 830 aa13.55□□□□□ -0.24
Trim2-201ENSMUST00000054990 Plekhg3Q4VAC9 1341 aa13.51□□□□□ -0.25
Trim2-201ENSMUST00000054990 BicraF8VPZ9 1578 aa13.48□□□□□ -0.25
Trim2-201ENSMUST00000054990 Sycp2Q9CUU3 1500 aa13.48□□□□□ -0.25
Trim2-201ENSMUST00000054990 Cep164Q5DU05 1446 aa13.47□□□□□ -0.25
Trim2-201ENSMUST00000054990 Aebp2Q9Z248 504 aaKnown RBP13.47□□□□□ -0.25
Trim2-201ENSMUST00000054990 Eid3Q3V124 375 aa13.46□□□□□ -0.25
Trim2-201ENSMUST00000054990 TonslQ6NZL6 1363 aa13.44□□□□□ -0.26
Trim2-201ENSMUST00000054990 1700123L14RikQ3V2K7 440 aa13.41□□□□□ -0.26
Trim2-201ENSMUST00000054990 Crybg2B7ZCC2 1516 aa13.41□□□□□ -0.26
Trim2-201ENSMUST00000054990 Smarca2Q6DIC0 1577 aa13.4□□□□□ -0.26
Trim2-201ENSMUST00000054990 Fam50aQ9WV03 339 aaKnown RBP13.39□□□□□ -0.27
Trim2-201ENSMUST00000054990 Anks4bQ8K3X6 423 aa13.36□□□□□ -0.27
Trim2-201ENSMUST00000054990 ClspnQ80YR7 1315 aa13.34□□□□□ -0.27
Trim2-201ENSMUST00000054990 NclP09405 707 aaKnown RBP13.3□□□□□ -0.28
Trim2-201ENSMUST00000054990 Rsf1E9PWW9 1441 aaKnown RBP13.29□□□□□ -0.28
Trim2-201ENSMUST00000054990 Eif5bQ05D44 1216 aaKnown RBP13.25□□□□□ -0.29
Trim2-201ENSMUST00000054990 Ttbk1Q6PCN3 1308 aa13.24□□□□□ -0.29
Trim2-201ENSMUST00000054990 Lmod2Q3UHZ5 550 aa13.24□□□□□ -0.29
Trim2-201ENSMUST00000054990 Ccdc88bQ4QRL3 1481 aa13.18□□□□□ -0.3
Trim2-201ENSMUST00000054990 Brd4Q9ESU6 1400 aaKnown RBP13.17□□□□□ -0.3
Trim2-201ENSMUST00000054990 Clip1Q922J3 1391 aa13.11□□□□□ -0.31
Trim2-201ENSMUST00000054990 Cecr2E9Q2Z1 1453 aa13.1□□□□□ -0.31
Trim2-201ENSMUST00000054990 SafbD3YXK2 937 aaKnown RBP13.1□□□□□ -0.31
Trim2-201ENSMUST00000054990 Aplp2Q06335 707 aa13.09□□□□□ -0.31
Trim2-201ENSMUST00000054990 Pelp1Q9DBD5 1123 aaKnown RBP13.06□□□□□ -0.32
Trim2-201ENSMUST00000054990 Stra8P70278 393 aa13.06□□□□□ -0.32
Trim2-201ENSMUST00000054990 Tnnt3Q9QZ47 272 aa13.05□□□□□ -0.32
Trim2-201ENSMUST00000054990 Golga3P55937 1487 aa13.03□□□□□ -0.32
Trim2-201ENSMUST00000054990 Hnrnpul2Q00PI9 745 aaKnown RBP13.01□□□□□ -0.33
Trim2-201ENSMUST00000054990 Fam71e1A1L3C1 212 aa13□□□□□ -0.33
Trim2-201ENSMUST00000054990 Synj1Q8CHC4 1574 aa12.98□□□□□ -0.33
Trim2-201ENSMUST00000054990 Myt1Q8CFC2 1127 aa12.94□□□□□ -0.34
Trim2-201ENSMUST00000054990 Zbtb4Q5F293 982 aa12.93□□□□□ -0.34
Trim2-201ENSMUST00000054990 NrdcQ8BHG1 1161 aa12.92□□□□□ -0.34
Trim2-201ENSMUST00000054990 Amer1Q7TS75 1132 aa12.92□□□□□ -0.34
Trim2-201ENSMUST00000054990 DiexfQ8BTT6 772 aaKnown RBP12.91□□□□□ -0.34
Trim2-201ENSMUST00000054990 Zbtb7cQ8VCZ7 619 aa12.89□□□□□ -0.35
Trim2-201ENSMUST00000054990 Anp32aO35381 247 aa12.87□□□□□ -0.35
Trim2-201ENSMUST00000054990 Chic2Q9D9G3 165 aa12.86□□□□□ -0.35
Trim2-201ENSMUST00000054990 CftrP26361 1476 aa12.86□□□□□ -0.35
Trim2-201ENSMUST00000054990 P3h3Q8CG70 732 aa12.84□□□□□ -0.35
Trim2-201ENSMUST00000054990 Calr4Q3TQS0 420 aa12.83□□□□□ -0.36
Trim2-201ENSMUST00000054990 Top2bQ64511 1612 aa12.83□□□□□ -0.36
Trim2-201ENSMUST00000054990 Ppp4r2Q0VGB7 417 aa12.82□□□□□ -0.36
Trim2-201ENSMUST00000054990 BlmO88700 1416 aa12.8□□□□□ -0.36
Trim2-201ENSMUST00000054990 Cttnbp2B9EJA2 1648 aa12.78□□□□□ -0.36
Trim2-201ENSMUST00000054990 Unc13aQ4KUS2 1712 aa12.77□□□□□ -0.36
Trim2-201ENSMUST00000054990 Thoc2B1AZI6 1594 aaKnown RBP12.77□□□□□ -0.37
Trim2-201ENSMUST00000054990 Setd5Q5XJV7 1441 aa12.76□□□□□ -0.37
Trim2-201ENSMUST00000054990 Npm1Q61937 292 aaKnown RBP12.76□□□□□ -0.37
Trim2-201ENSMUST00000054990 Mrs2Q5NCE8 434 aa12.74□□□□□ -0.37
Trim2-201ENSMUST00000054990 4933416C03RikQ3V063 378 aa12.73□□□□□ -0.37
Trim2-201ENSMUST00000054990 Hspa5P20029 655 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms