RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Cep170Q6A065 1588 aa21.14■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Zmym4A2A791 1549 aaKnown RBP21.13■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Ythdc2B2RR83 1445 aaKnown RBP21.13■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Kif7B7ZNG0 1348 aa21.13■□□□□ 0.97
Ckap4-201ENSMUST00000053871 B4galnt3Q6L8S8 986 aa21.13■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Kif16bB1AVY7 1312 aa21.13■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Abcc6Q9R1S7 1498 aa21.12■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Kif1bQ60575 1816 aaKnown RBP21.12■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Ttc21bQ0HA38 1315 aa21.11■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Speer4f1Q9D5Q6 258 aa21.11■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Abca8bQ8K440 1620 aa21.1■□□□□ 0.97
Ckap4-201ENSMUST00000053871 ShprhQ7TPQ3 1674 aa21.1■□□□□ 0.97
Ckap4-201ENSMUST00000053871 ErbinQ80TH2 1402 aa21.1■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Setd1aE9PYH6 1716 aa21.1■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Dbr1Q923B1 550 aa21.1■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Robo2Q7TPD3 1470 aa21.08■□□□□ 0.97
Ckap4-201ENSMUST00000053871 Rab3gap2Q8BMG7 1366 aa21.08■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Kidins220E9Q9B7 1793 aa21.07■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Hecw1Q8K4P8 1604 aa21.07■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Tubgcp6G5E8P0 1769 aa21.07■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Neurl4Q5NCX5 1563 aa21.07■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Ylpm1Q9R0I7 1386 aaKnown RBP21.07■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Igf1rQ60751 1373 aa21.05■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Plch2A2AP18 1501 aa21.05■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Prkrip1Q9CWV6 186 aaKnown RBP21.05■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Gm16486A0A1D5RMD1 1434 aa21.05■□□□□ 0.96
Ckap4-201ENSMUST00000053871 Tex14Q7M6U3 1450 aa21.04■□□□□ 0.96
Ckap4-201ENSMUST00000053871 ChgaP26339 463 aaKnown RBP21.01■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Rwdd1Q9CQK7 243 aa21.01■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Ak9G3UYQ4 1894 aa21.01■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Stag3O70576 1240 aa21.01■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Xrn1P97789 1719 aaKnown RBP21■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Puf60Q3UEB3 564 aaKnown RBP21■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Ipo9Q91YE6 1041 aa21■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Sbno1Q689Z5 1390 aa21■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Atp1b4Q99ME6 356 aa20.99■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Kiaa1210E9Q0C6 1637 aa20.99■□□□□ 0.95
Ckap4-201ENSMUST00000053871 PtprtQ99M80 1454 aa20.98■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Ttll13A4Q9F6 804 aa20.98■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Polr3glQ8R0C0 218 aa20.98■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Golga2Q921M4 999 aa20.97■□□□□ 0.95
Ckap4-201ENSMUST00000053871 Ccdc30Q8BVF4 654 aa20.96■□□□□ 0.95
Ckap4-201ENSMUST00000053871 AatkQ80YE4 1365 aa20.94■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Stk26Q99JT2 416 aa20.94■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Ecm2Q5FW85 670 aa20.93■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Trim26Q99PN3 545 aa20.93■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Bcl11aQ9QYE3 773 aa20.93■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Zfyve16Q80U44 1528 aa20.92■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Nos1Q9Z0J4 1429 aa20.92■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Arid4bA2CG63 1314 aaKnown RBP20.92■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Gas2l2Q5SSG4 860 aa20.92■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Myo3aQ8K3H5 1613 aa20.92■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Abca6Q8K441 1624 aa20.91■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Abca17E9PX95 1733 aa20.9■□□□□ 0.94
Ckap4-201ENSMUST00000053871 Plekhh1Q80TI1 1356 aa20.89■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Myo5cE9Q1F5 1742 aa20.89■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Zranb1Q7M760 708 aa20.88■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Chmp5Q9D7S9 219 aa20.88■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Uggt2E9Q4X2 1504 aa20.87■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Rangap1P46061 589 aaKnown RBP20.87■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Stard8Q8K031 1019 aa20.87■□□□□ 0.93
Ckap4-201ENSMUST00000053871 AnkarA2RT91 1465 aa20.87■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Abca9Q8K449 1623 aa20.87■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Atxn3Q9CVD2 355 aa20.86■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Znf518aB2RRF6 1478 aaKnown RBP20.86■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Pola1P33609 1465 aa20.86■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Ptch1Q61115 1434 aa20.86■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Tspyl2Q7TQI8 677 aa20.85■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Col17a1Q07563 1470 aa20.85■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Usp19Q3UJD6 1360 aa20.84■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Ccdc27Q3V036 639 aa20.84■□□□□ 0.93
Ckap4-201ENSMUST00000053871 IqubQ8CDK3 788 aa20.84■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Atf7ipQ7TT18 1306 aa20.84■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Mbd3Q9Z2D8 285 aaKnown RBP20.84■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Pank1Q8K4K6 548 aa20.83■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Mink1Q9JM52 1308 aa20.83■□□□□ 0.93
Ckap4-201ENSMUST00000053871 Armcx1Q9CX83 456 aa20.83■□□□□ 0.92
Ckap4-201ENSMUST00000053871 AU022751B1B0V2 589 aa20.82■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Exosc9Q9JHI7 438 aaKnown RBP20.82■□□□□ 0.92
Ckap4-201ENSMUST00000053871 OvosQ3UU35 1456 aa20.82■□□□□ 0.92
Ckap4-201ENSMUST00000053871 CanxP35564 591 aaKnown RBP20.81■□□□□ 0.92
Ckap4-201ENSMUST00000053871 DiexfQ8BTT6 772 aaKnown RBP20.81■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Kiaa1107Q80TK0 1369 aa20.81■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Apaf1O88879 1249 aa20.81■□□□□ 0.92
Ckap4-201ENSMUST00000053871 4930567H17RikQ3V0K5 233 aa20.81■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Nphp4P59240 1425 aa20.8■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Iqgap3F8VQ29 1632 aa20.8■□□□□ 0.92
Ckap4-201ENSMUST00000053871 EspnQ9ET47 871 aa20.79■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Kdm5aQ3UXZ9 1690 aa20.79■□□□□ 0.92
Ckap4-201ENSMUST00000053871 ArxO35085 564 aa20.79■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Fndc1E9Q043 1732 aa20.78■□□□□ 0.92
Ckap4-201ENSMUST00000053871 U2af1Q9D883 239 aaKnown RBP20.78■□□□□ 0.92
Ckap4-201ENSMUST00000053871 GsdmaQ9EST1 446 aa20.78■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Itsn2Q9Z0R6 1659 aa20.78■□□□□ 0.92
Ckap4-201ENSMUST00000053871 P2rx7Q9Z1M0 595 aa20.77■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Uspl1Q3ULM6 1089 aa20.77■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Gli2Q0VGT2 1544 aa20.77■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Kdm2bQ6P1G2 1309 aa20.77■□□□□ 0.92
Ckap4-201ENSMUST00000053871 Trim30dE9PWL0 497 aa20.76■□□□□ 0.91
Ckap4-201ENSMUST00000053871 TnikP83510 1323 aa20.76■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms