RNA–Protein interactions for RNA: ENSMUST00000053286.8

Ccdc84-201, Transcript of Coiled-coil domain-containing protein 84, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc84, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84-201ENSMUST00000053286 Mroh3A0A1D5RM54 893 aa27.93■■■□□ 2.06
Ccdc84-201ENSMUST00000053286 Rgl3Q3UYI5 709 aa27.93■■■□□ 2.06
Ccdc84-201ENSMUST00000053286 Prrc2bQ7TPM1 1486 aaKnown RBP27.91■■■□□ 2.06
Ccdc84-201ENSMUST00000053286 Txndc2Q6P902 515 aa27.88■■■□□ 2.05
Ccdc84-201ENSMUST00000053286 Dip2aQ8BWT5 1523 aa27.88■■■□□ 2.05
Ccdc84-201ENSMUST00000053286 P3h3Q8CG70 732 aa27.85■■■□□ 2.05
Ccdc84-201ENSMUST00000053286 Arid4bA2CG63 1314 aaKnown RBP27.85■■■□□ 2.05
Ccdc84-201ENSMUST00000053286 Scn4aQ9ER60 1841 aa27.84■■■□□ 2.05
Ccdc84-201ENSMUST00000053286 Rimbp3Q3V0F0 1606 aa27.83■■■□□ 2.05
Ccdc84-201ENSMUST00000053286 Pcgf6Q99NA9 353 aa27.81■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 Scaf11E9PZM7 1456 aaKnown RBP27.81■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 Gemin5Q8BX17 1502 aaKnown RBP27.8■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 AU022751B1B0V2 589 aa27.78■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 Psme1P97371 249 aa27.78■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 Tulp4Q9JIL5 1547 aa27.78■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 Adamts13Q769J6 1426 aa27.77■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 TonslQ6NZL6 1363 aa27.76■■■□□ 2.04
Ccdc84-201ENSMUST00000053286 Gm13695A2AK44 830 aa27.76■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Rims2Q9EQZ7 1530 aa27.74■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Neurod1Q60867 357 aa27.74■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Ifit1bl1D3Z6F0 470 aa27.73■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Phlpp1Q8CHE4 1687 aa27.73■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Zc3h13E9Q784 1729 aaKnown RBP27.73■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Plxnc1Q9QZC2 1574 aa27.73■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 PplQ9R269 1755 aa27.72■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Grwd1Q810D6 446 aaKnown RBP27.72■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Ncoa1P70365 1447 aa27.72■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Las1lA2BE28 776 aaKnown RBP27.72■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Pip4k2bQ80XI4 416 aa27.71■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Atp1b4Q99ME6 356 aa27.71■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Rims1Q99NE5 1463 aa27.71■■■□□ 2.03
Ccdc84-201ENSMUST00000053286 Myom1Q62234 1667 aaKnown RBP27.69■■■□□ 2.02
Ccdc84-201ENSMUST00000053286 Eif2ak4Q9QZ05 1648 aa27.69■■■□□ 2.02
Ccdc84-201ENSMUST00000053286 Myo3aQ8K3H5 1613 aa27.68■■■□□ 2.02
Ccdc84-201ENSMUST00000053286 IghaA0A0A6YXW6 389 aa27.64■■■□□ 2.02
Ccdc84-201ENSMUST00000053286 PalldQ9ET54 1408 aa27.64■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Kdm2aP59997 1161 aa27.64■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Ltbp4Q8K4G1 1666 aa27.64■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Iqgap1Q9JKF1 1657 aaKnown RBP27.64■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Shq1Q7TMX5 569 aa27.63■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Asxl2Q8BZ32 1370 aa27.63■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Arhgef28P97433 1693 aa27.62■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Supt5hO55201 1082 aaKnown RBP27.61■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Lmtk3Q5XJV6 1424 aa27.61■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Q9D9H8 365 aa27.61■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Cdk13Q69ZA1 1511 aaKnown RBP27.6■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Os9Q8K2C7 672 aa27.6■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Polr3aB2RXC6 1390 aa27.59■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Srpk2O54781 681 aaKnown RBP27.58■■■□□ 2.01
Ccdc84-201ENSMUST00000053286 Slit3Q9WVB4 1523 aa27.57■■■□□ 2
Ccdc84-201ENSMUST00000053286 Cep152A2AUM9 1736 aaKnown RBP27.57■■■□□ 2
Ccdc84-201ENSMUST00000053286 Mbd5B1AYB6 1498 aa27.56■■■□□ 2
Ccdc84-201ENSMUST00000053286 Cpsf1Q9EPU4 1441 aaKnown RBP27.55■■■□□ 2
Ccdc84-201ENSMUST00000053286 Fan1Q69ZT1 1020 aa27.55■■■□□ 2
Ccdc84-201ENSMUST00000053286 Slc52a2Q9D8F3 450 aa27.55■■■□□ 2
Ccdc84-201ENSMUST00000053286 Setd1aE9PYH6 1716 aa27.55■■■□□ 2
Ccdc84-201ENSMUST00000053286 Mug2P28666 1451 aa27.54■■■□□ 2
Ccdc84-201ENSMUST00000053286 Nrxn3Q6P9K9 1571 aa27.54■■■□□ 2
Ccdc84-201ENSMUST00000053286 Gm20521D3Z5F7 333 aa27.53■■■□□ 2
Ccdc84-201ENSMUST00000053286 Rapgef3Q8VCC8 918 aa27.53■■■□□ 2
Ccdc84-201ENSMUST00000053286 PzpQ61838 1495 aa27.52■■■□□ 2
Ccdc84-201ENSMUST00000053286 Med1Q925J9 1575 aa27.51■■□□□ 1.99
Ccdc84-201ENSMUST00000053286 Puf60Q3UEB3 564 aaKnown RBP27.48■■□□□ 1.99
Ccdc84-201ENSMUST00000053286 Ppargc1bQ8VHJ7 1014 aa27.47■■□□□ 1.99
Ccdc84-201ENSMUST00000053286 MaddQ80U28 1577 aa27.45■■□□□ 1.98
Ccdc84-201ENSMUST00000053286 Cdk5rap2Q8K389 1822 aa27.44■■□□□ 1.98
Ccdc84-201ENSMUST00000053286 Dapk1Q80YE7 1442 aa27.43■■□□□ 1.98
Ccdc84-201ENSMUST00000053286 Lrrc7Q80TE7 1490 aa27.42■■□□□ 1.98
Ccdc84-201ENSMUST00000053286 Stk26Q99JT2 416 aa27.42■■□□□ 1.98
Ccdc84-201ENSMUST00000053286 Pik3r4Q8VD65 1358 aa27.42■■□□□ 1.98
Ccdc84-201ENSMUST00000053286 Rundc1Q0VDN7 615 aa27.38■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Thsd7aQ69ZU6 1645 aa27.37■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Utp14aQ640M1 767 aaKnown RBP27.37■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Arap3Q8R5G7 1538 aa27.36■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Tubgcp6G5E8P0 1769 aa27.35■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Usp40Q8BWR4 1235 aa27.35■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 HnrnpmQ9D0E1 729 aaKnown RBP27.35■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Card11Q8CIS0 1159 aa27.33■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 RalgapbQ8BQZ4 1484 aa27.33■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 Gli3Q61602 1583 aa27.33■■□□□ 1.97
Ccdc84-201ENSMUST00000053286 IqubQ8CDK3 788 aa27.3■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Cps1Q8C196 1500 aa27.3■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Sipa1l1Q8C0T5 1782 aa27.29■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Cep170bQ80U49 1574 aa27.29■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Tns3Q5SSZ5 1440 aa27.29■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Sall2Q9QX96 1004 aa27.28■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Stag3O70576 1240 aa27.27■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Nphp4P59240 1425 aa27.27■■□□□ 1.96
Ccdc84-201ENSMUST00000053286 Zbtb4Q5F293 982 aa27.26■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 ClspnQ80YR7 1315 aa27.25■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Gtf2e1Q9D0D5 440 aa27.25■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 DnmbpQ6TXD4 1580 aa27.25■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Plekhg1F6S200 1446 aa27.25■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Aebp2Q9Z248 504 aaKnown RBP27.24■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Stard8Q8K031 1019 aa27.24■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Srcin1Q9QWI6 1250 aa27.24■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Ift172Q6VH22 1749 aa27.22■■□□□ 1.95
Ccdc84-201ENSMUST00000053286 Tmem94Q7TSH8 1360 aa27.19■■□□□ 1.94
Ccdc84-201ENSMUST00000053286 Rock2P70336 1388 aa27.18■■□□□ 1.94
Ccdc84-201ENSMUST00000053286 Wdr66E9Q743 1299 aa27.18■■□□□ 1.94
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms