RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Arhgap23Q69ZH9 1483 aa32.12■■■□□ 2.73
Upf3a-201ENSMUST00000043767 Efcab6Q6P1E8 1516 aa32.09■■■□□ 2.73
Upf3a-201ENSMUST00000043767 Ehbp1l1Q99MS7 1716 aa32.09■■■□□ 2.73
Upf3a-201ENSMUST00000043767 Skint5A7XUY5 1461 aa32.09■■■□□ 2.73
Upf3a-201ENSMUST00000043767 RictorQ6QI06 1708 aa32.08■■■□□ 2.73
Upf3a-201ENSMUST00000043767 Card11Q8CIS0 1159 aa32.05■■■□□ 2.72
Upf3a-201ENSMUST00000043767 RalgapbQ8BQZ4 1484 aa32.03■■■□□ 2.72
Upf3a-201ENSMUST00000043767 Ahdc1Q6PAL7 1594 aaKnown RBP32.02■■■□□ 2.72
Upf3a-201ENSMUST00000043767 Safb2Q80YR5 991 aaKnown RBP32.02■■■□□ 2.72
Upf3a-201ENSMUST00000043767 1700123L14RikQ3V2K7 440 aa32.01■■■□□ 2.71
Upf3a-201ENSMUST00000043767 Kdm2aP59997 1161 aa32■■■□□ 2.71
Upf3a-201ENSMUST00000043767 Csrnp3P59055 597 aa31.99■■■□□ 2.71
Upf3a-201ENSMUST00000043767 Mapk8ip2Q9ERE9 830 aa31.99■■■□□ 2.71
Upf3a-201ENSMUST00000043767 Uggt1Q6P5E4 1551 aa31.97■■■□□ 2.71
Upf3a-201ENSMUST00000043767 Mroh1E0CZ22 1640 aa31.95■■■□□ 2.71
Upf3a-201ENSMUST00000043767 Rims1Q99NE5 1463 aa31.95■■■□□ 2.7
Upf3a-201ENSMUST00000043767 AU022751B1B0V2 589 aa31.93■■■□□ 2.7
Upf3a-201ENSMUST00000043767 Ercc6l2Q9JIM3 1537 aa31.92■■■□□ 2.7
Upf3a-201ENSMUST00000043767 Ncoa1P70365 1447 aa31.9■■■□□ 2.7
Upf3a-201ENSMUST00000043767 Med14A2ABV5 1459 aaKnown RBP31.88■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Myo3aQ8K3H5 1613 aa31.88■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Aplp2Q06335 707 aa31.88■■■□□ 2.69
Upf3a-201ENSMUST00000043767 PtprmP28828 1452 aa31.87■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Prrc2bQ7TPM1 1486 aaKnown RBP31.87■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Os9Q8K2C7 672 aa31.87■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Zbtb4Q5F293 982 aa31.86■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Kif13aQ9EQW7 1749 aa31.86■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Cep152A2AUM9 1736 aaKnown RBP31.85■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Itsn1Q9Z0R4 1714 aa31.84■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Cwc22Q8C5N3 908 aaKnown RBP31.84■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Gm20521D3Z5F7 333 aa31.84■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Fan1Q69ZT1 1020 aa31.83■■■□□ 2.69
Upf3a-201ENSMUST00000043767 Srpk2O54781 681 aaKnown RBP31.82■■■□□ 2.68
Upf3a-201ENSMUST00000043767 Naip7Q9JIB3 1402 aa31.81■■■□□ 2.68
Upf3a-201ENSMUST00000043767 Plxnc1Q9QZC2 1574 aa31.8■■■□□ 2.68
Upf3a-201ENSMUST00000043767 Myom1Q62234 1667 aaKnown RBP31.76■■■□□ 2.67
Upf3a-201ENSMUST00000043767 Alpk3Q924C5 1678 aa31.76■■■□□ 2.67
Upf3a-201ENSMUST00000043767 Cdk5rap2Q8K389 1822 aa31.74■■■□□ 2.67
Upf3a-201ENSMUST00000043767 Rock2P70336 1388 aa31.73■■■□□ 2.67
Upf3a-201ENSMUST00000043767 MlecQ6ZQI3 291 aaKnown RBP31.72■■■□□ 2.67
Upf3a-201ENSMUST00000043767 Puf60Q3UEB3 564 aaKnown RBP31.71■■■□□ 2.67
Upf3a-201ENSMUST00000043767 Dip2bQ3UH60 1574 aa31.71■■■□□ 2.67
Upf3a-201ENSMUST00000043767 MyclP10166 368 aa31.69■■■□□ 2.66
Upf3a-201ENSMUST00000043767 P3h3Q8CG70 732 aa31.69■■■□□ 2.66
Upf3a-201ENSMUST00000043767 Srcin1Q9QWI6 1250 aa31.69■■■□□ 2.66
Upf3a-201ENSMUST00000043767 Atp1b4Q99ME6 356 aa31.68■■■□□ 2.66
Upf3a-201ENSMUST00000043767 Usp40Q8BWR4 1235 aa31.67■■■□□ 2.66
Upf3a-201ENSMUST00000043767 4930407I10RikD3Z5T8 1512 aa31.65■■■□□ 2.66
Upf3a-201ENSMUST00000043767 Slc52a2Q9D8F3 450 aa31.63■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Chd2E9PZM4 1827 aaKnown RBP31.63■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Shq1Q7TMX5 569 aa31.63■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Slc24a1Q91WD8 1130 aa31.61■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Plekhg5Q66T02 1073 aa31.6■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Txndc2Q6P902 515 aa31.6■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Gtf2e1Q9D0D5 440 aa31.59■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Nphp4P59240 1425 aa31.58■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Lrrc7Q80TE7 1490 aa31.58■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Q9D9H8 365 aa31.58■■■□□ 2.65
Upf3a-201ENSMUST00000043767 Sipa1l1Q8C0T5 1782 aa31.57■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Setd1aE9PYH6 1716 aa31.56■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Pola1P33609 1465 aa31.55■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Arhgef28P97433 1693 aa31.55■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Kdm5aQ3UXZ9 1690 aa31.55■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Zc3h13E9Q784 1729 aaKnown RBP31.54■■■□□ 2.64
Upf3a-201ENSMUST00000043767 DnmbpQ6TXD4 1580 aa31.54■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Asxl2Q8BZ32 1370 aa31.53■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Psme1P97371 249 aa31.52■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Stard8Q8K031 1019 aa31.52■■■□□ 2.64
Upf3a-201ENSMUST00000043767 Stk26Q99JT2 416 aa31.51■■■□□ 2.63
Upf3a-201ENSMUST00000043767 PalldQ9ET54 1408 aa31.5■■■□□ 2.63
Upf3a-201ENSMUST00000043767 PplQ9R269 1755 aa31.5■■■□□ 2.63
Upf3a-201ENSMUST00000043767 CenpbP27790 599 aa31.49■■■□□ 2.63
Upf3a-201ENSMUST00000043767 IghaA0A0A6YXW6 389 aa31.48■■■□□ 2.63
Upf3a-201ENSMUST00000043767 Stag3O70576 1240 aa31.47■■■□□ 2.63
Upf3a-201ENSMUST00000043767 Bcl9Q9D219 1425 aa31.46■■■□□ 2.63
Upf3a-201ENSMUST00000043767 Gemin5Q8BX17 1502 aaKnown RBP31.46■■■□□ 2.63
Upf3a-201ENSMUST00000043767 Gm13695A2AK44 830 aa31.45■■■□□ 2.62
Upf3a-201ENSMUST00000043767 Myt1Q8CFC2 1127 aa31.43■■■□□ 2.62
Upf3a-201ENSMUST00000043767 Eif2ak4Q9QZ05 1648 aa31.43■■■□□ 2.62
Upf3a-201ENSMUST00000043767 IqubQ8CDK3 788 aa31.42■■■□□ 2.62
Upf3a-201ENSMUST00000043767 Itsn2Q9Z0R6 1659 aa31.41■■■□□ 2.62
Upf3a-201ENSMUST00000043767 Ift172Q6VH22 1749 aa31.4■■■□□ 2.62
Upf3a-201ENSMUST00000043767 Cep170bQ80U49 1574 aa31.39■■■□□ 2.62
Upf3a-201ENSMUST00000043767 MaddQ80U28 1577 aa31.39■■■□□ 2.62
Upf3a-201ENSMUST00000043767 Arid4bA2CG63 1314 aaKnown RBP31.38■■■□□ 2.61
Upf3a-201ENSMUST00000043767 Dip2aQ8BWT5 1523 aa31.38■■■□□ 2.61
Upf3a-201ENSMUST00000043767 Smg6P61406 1418 aaKnown RBP31.38■■■□□ 2.61
Upf3a-201ENSMUST00000043767 Topaz1E5FYH1 1653 aa31.37■■■□□ 2.61
Upf3a-201ENSMUST00000043767 Utp14aQ640M1 767 aaKnown RBP31.36■■■□□ 2.61
Upf3a-201ENSMUST00000043767 GphnQ8BUV3 769 aaKnown RBP31.35■■■□□ 2.61
Upf3a-201ENSMUST00000043767 Tnnt3Q9QZ47 272 aa31.34■■■□□ 2.61
Upf3a-201ENSMUST00000043767 PrxO55103 1391 aa31.33■■■□□ 2.61
Upf3a-201ENSMUST00000043767 Tubgcp6G5E8P0 1769 aa31.32■■■□□ 2.6
Upf3a-201ENSMUST00000043767 Pank3Q8R2W9 370 aa31.31■■■□□ 2.6
Upf3a-201ENSMUST00000043767 Slc4a1apE9PX68 744 aa31.3■■■□□ 2.6
Upf3a-201ENSMUST00000043767 Slit3Q9WVB4 1523 aa31.29■■■□□ 2.6
Upf3a-201ENSMUST00000043767 Sbno1Q689Z5 1390 aa31.29■■■□□ 2.6
Upf3a-201ENSMUST00000043767 Inpp5dQ9ES52 1191 aa31.25■■■□□ 2.59
Upf3a-201ENSMUST00000043767 Mink1Q9JM52 1308 aa31.24■■■□□ 2.59
Upf3a-201ENSMUST00000043767 CenpjQ569L8 1344 aa31.23■■■□□ 2.59
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms