RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 PrxO55103 1391 aa25.12■■□□□ 1.61
Ccdc50-201ENSMUST00000039443 Q7TT23 1179 aa25.12■■□□□ 1.61
Ccdc50-201ENSMUST00000039443 Sbno1Q689Z5 1390 aa25.11■■□□□ 1.61
Ccdc50-201ENSMUST00000039443 Synj2Q9D2G5 1434 aa25.09■■□□□ 1.61
Ccdc50-201ENSMUST00000039443 Pank3Q8R2W9 370 aa25.09■■□□□ 1.61
Ccdc50-201ENSMUST00000039443 Rrp7aQ9D1C9 280 aaKnown RBP25.08■■□□□ 1.61
Ccdc50-201ENSMUST00000039443 Hecw2Q6I6G8 1578 aa25.07■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Tmf1B9EKI3 1091 aa25.07■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Zmym3Q9JLM4 1370 aa25.06■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Zscan10Q3URR7 782 aa25.05■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Iqcf3Q9D498 203 aa25.05■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Atp10aO54827 1508 aa25.05■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Prdm16A2A935 1275 aa25.04■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Adamts13Q769J6 1426 aa25.03■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Rad21Q61550 635 aaKnown RBP25.02■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Inpp5dQ9ES52 1191 aa25.02■■□□□ 1.6
Ccdc50-201ENSMUST00000039443 Ttll13A4Q9F6 804 aa25.01■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Ifit1bl1D3Z6F0 470 aa25.01■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Atf7ipQ7TT18 1306 aa25■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Ptch1Q61115 1434 aa24.99■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Robo2Q7TPD3 1470 aa24.99■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Kif16bB1AVY7 1312 aa24.99■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 PrkcshO08795 521 aa24.98■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Map3k5O35099 1380 aa24.98■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Dip2cE9PWR4 1557 aa24.98■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 RereQ80TZ9 1558 aa24.97■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Nos1Q9Z0J4 1429 aa24.97■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Plekhh1Q80TI1 1356 aa24.96■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 AnkarA2RT91 1465 aa24.96■■□□□ 1.59
Ccdc50-201ENSMUST00000039443 Gm16486A0A1D5RMD1 1434 aa24.95■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Rab3gap2Q8BMG7 1366 aa24.95■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Rwdd1Q9CQK7 243 aa24.94■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Cul9Q80TT8 1865 aa24.94■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Pola1P33609 1465 aa24.94■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Kdm2bQ6P1G2 1309 aa24.93■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Edc4Q3UJB9 1406 aaKnown RBP24.92■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 EspnQ9ET47 871 aa24.92■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Nsd2Q8BVE8 1365 aa24.92■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Spag9Q58A65 1321 aaKnown RBP24.92■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Tulp4Q9JIL5 1547 aa24.91■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Mroh3A0A1D5RM54 893 aa24.91■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Esx1O88933 382 aa24.91■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 ChgaP26339 463 aaKnown RBP24.91■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Ppp2r1aQ76MZ3 589 aa24.91■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Zbtb7cQ8VCZ7 619 aa24.9■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Zbtb4Q5F293 982 aa24.9■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Yeats2Q3TUF7 1407 aa24.89■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Xrn1P97789 1719 aaKnown RBP24.89■■□□□ 1.58
Ccdc50-201ENSMUST00000039443 Cdc42bpgQ80UW5 1551 aa24.87■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Nkx1-2P42580 305 aa24.87■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Srcin1Q9QWI6 1250 aa24.87■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Abca17E9PX95 1733 aa24.87■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Znf518aB2RRF6 1478 aaKnown RBP24.86■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Fam184bQ0KK56 942 aa24.86■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Pde4cQ3UEI1 686 aa24.86■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Kif1bQ60575 1816 aaKnown RBP24.86■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Itsn2Q9Z0R6 1659 aa24.85■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Dnajc5gQ8C632 165 aa24.84■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 Slc4a1apE9PX68 744 aa24.83■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 CrbnQ8C7D2 445 aa24.83■■□□□ 1.57
Ccdc50-201ENSMUST00000039443 CanxP35564 591 aaKnown RBP24.83■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Irx3P81067 507 aa24.83■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Mapk8ip3Q9ESN9 1337 aa24.83■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Uggt2E9Q4X2 1504 aa24.8■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Ppm1gQ61074 542 aa24.8■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Qser1A2BIE1 1698 aa24.8■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 NudcO35685 332 aaKnown RBP24.79■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Chmp5Q9D7S9 219 aa24.79■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Abcc6Q9R1S7 1498 aa24.79■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 ShprhQ7TPQ3 1674 aa24.79■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Mre11Q61216 706 aa24.78■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 NpatQ8BMA5 1420 aa24.78■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Trpm1Q2TV84 1622 aa24.78■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Usp54Q8BL06 1588 aaKnown RBP24.78■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Gli2Q0VGT2 1544 aa24.77■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 B4galnt3Q6L8S8 986 aa24.77■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Dnai1Q8C0M8 701 aa24.77■■□□□ 1.56
Ccdc50-201ENSMUST00000039443 Gtf3c3Q3TMP1 882 aa24.76■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Smc5Q8CG46 1101 aaKnown RBP24.76■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Kdm5aQ3UXZ9 1690 aa24.76■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Stard8Q8K031 1019 aa24.76■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Topbp1Q6ZQF0 1515 aa24.75■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Kif3bQ61771 747 aa24.74■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 DaxxO35613 739 aa24.74■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Cep152A2AUM9 1736 aaKnown RBP24.73■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Ylpm1Q9R0I7 1386 aaKnown RBP24.72■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Plppr3Q7TPB0 716 aa24.72■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Cfap65Q3V0B4 1847 aa24.72■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 4933416C03RikQ3V063 378 aa24.71■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Speer4f1Q9D5Q6 258 aa24.71■■□□□ 1.55
Ccdc50-201ENSMUST00000039443 Tmc1Q8R4P5 757 aa24.7■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Ccdc30Q8BVF4 654 aa24.69■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Usp19Q3UJD6 1360 aa24.69■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 AampJ3QN89 436 aa24.69■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Nlrp6Q91WS2 869 aa24.68■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Sart3Q9JLI8 962 aaKnown RBP24.68■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Kif7B7ZNG0 1348 aa24.66■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Adamtsl3G3UXC7 1706 aa24.66■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Ralbp1Q62172 648 aa24.66■■□□□ 1.54
Ccdc50-201ENSMUST00000039443 Myo5cE9Q1F5 1742 aa24.65■■□□□ 1.54
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms