RNA–Protein interactions for RNA: ENSMUST00000039007.6

Trp53rka-201, Transcript of MCG14616, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trp53rka, Length 1,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rka-201ENSMUST00000039007 Sall3Q62255 1320 aa29.19■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 Usp47Q8BY87 1376 aa29.18■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 Naip7Q9JIB3 1402 aa29.17■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 Rock1P70335 1354 aa29.16■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 Mroh1E0CZ22 1640 aa29.15■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 Hspa5P20029 655 aaKnown RBP29.14■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 AatkQ80YE4 1365 aa29.14■■■□□ 2.26
Trp53rka-201ENSMUST00000039007 Dip2aQ8BWT5 1523 aa29.14■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Neurod1Q60867 357 aa29.11■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Rimbp3Q3V0F0 1606 aa29.11■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Scn4aQ9ER60 1841 aa29.11■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Prrc2bQ7TPM1 1486 aaKnown RBP29.1■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Washc2Q6PGL7 1334 aa29.09■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Mroh3A0A1D5RM54 893 aa29.09■■■□□ 2.25
Trp53rka-201ENSMUST00000039007 Txndc2Q6P902 515 aa29.06■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Gemin5Q8BX17 1502 aaKnown RBP29.06■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Phlpp1Q8CHE4 1687 aa29.04■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Arid4bA2CG63 1314 aaKnown RBP29.03■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Scaf11E9PZM7 1456 aaKnown RBP29.03■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Zc3h13E9Q784 1729 aaKnown RBP29.03■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Rgl3Q3UYI5 709 aa29.03■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 PplQ9R269 1755 aa29.01■■■□□ 2.24
Trp53rka-201ENSMUST00000039007 Rims2Q9EQZ7 1530 aa28.99■■■□□ 2.23
Trp53rka-201ENSMUST00000039007 P3h3Q8CG70 732 aa28.99■■■□□ 2.23
Trp53rka-201ENSMUST00000039007 Ncoa1P70365 1447 aa28.97■■■□□ 2.23
Trp53rka-201ENSMUST00000039007 Plxnc1Q9QZC2 1574 aa28.97■■■□□ 2.23
Trp53rka-201ENSMUST00000039007 Psme1P97371 249 aa28.96■■■□□ 2.23
Trp53rka-201ENSMUST00000039007 Tulp4Q9JIL5 1547 aa28.96■■■□□ 2.23
Trp53rka-201ENSMUST00000039007 Eif2ak4Q9QZ05 1648 aa28.93■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 AU022751B1B0V2 589 aa28.93■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Gm13695A2AK44 830 aa28.92■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Myom1Q62234 1667 aaKnown RBP28.92■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Adamts13Q769J6 1426 aa28.92■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Myo3aQ8K3H5 1613 aa28.91■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Lmtk3Q5XJV6 1424 aa28.91■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Rims1Q99NE5 1463 aa28.9■■■□□ 2.22
Trp53rka-201ENSMUST00000039007 Pip4k2bQ80XI4 416 aa28.89■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Ltbp4Q8K4G1 1666 aa28.88■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 PalldQ9ET54 1408 aa28.87■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Arhgef28P97433 1693 aa28.86■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Ifit1bl1D3Z6F0 470 aa28.85■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Atp1b4Q99ME6 356 aa28.85■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Iqgap1Q9JKF1 1657 aaKnown RBP28.84■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Anks4bQ8K3X6 423 aa28.83■■■□□ 2.21
Trp53rka-201ENSMUST00000039007 Cep152A2AUM9 1736 aaKnown RBP28.81■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Grwd1Q810D6 446 aaKnown RBP28.8■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Setd1aE9PYH6 1716 aa28.8■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Cdk13Q69ZA1 1511 aaKnown RBP28.8■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Slit3Q9WVB4 1523 aa28.8■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 IghaA0A0A6YXW6 389 aa28.78■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Nrxn3Q6P9K9 1571 aa28.78■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Nop58Q6DFW4 536 aaKnown RBP28.77■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Shq1Q7TMX5 569 aa28.77■■■□□ 2.2
Trp53rka-201ENSMUST00000039007 Med1Q925J9 1575 aa28.76■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Q9D9H8 365 aa28.75■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Kdm2aP59997 1161 aa28.74■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Rapgef3Q8VCC8 918 aa28.74■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Slc52a2Q9D8F3 450 aa28.74■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Polr3aB2RXC6 1390 aa28.74■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Asxl2Q8BZ32 1370 aa28.74■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Srpk2O54781 681 aaKnown RBP28.73■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 PzpQ61838 1495 aa28.73■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Cpsf1Q9EPU4 1441 aaKnown RBP28.71■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 Os9Q8K2C7 672 aa28.71■■■□□ 2.19
Trp53rka-201ENSMUST00000039007 MaddQ80U28 1577 aa28.69■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Mbd5B1AYB6 1498 aa28.69■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Cdk5rap2Q8K389 1822 aa28.68■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Fan1Q69ZT1 1020 aa28.67■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Gm20521D3Z5F7 333 aa28.66■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Mug2P28666 1451 aa28.66■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Pik3r4Q8VD65 1358 aa28.65■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Tubgcp6G5E8P0 1769 aa28.64■■■□□ 2.18
Trp53rka-201ENSMUST00000039007 Thsd7aQ69ZU6 1645 aa28.63■■■□□ 2.17
Trp53rka-201ENSMUST00000039007 Puf60Q3UEB3 564 aaKnown RBP28.61■■■□□ 2.17
Trp53rka-201ENSMUST00000039007 Arap3Q8R5G7 1538 aa28.6■■■□□ 2.17
Trp53rka-201ENSMUST00000039007 Gli3Q61602 1583 aa28.59■■■□□ 2.17
Trp53rka-201ENSMUST00000039007 Lrrc7Q80TE7 1490 aa28.57■■■□□ 2.16
Trp53rka-201ENSMUST00000039007 Sipa1l1Q8C0T5 1782 aa28.55■■■□□ 2.16
Trp53rka-201ENSMUST00000039007 Dapk1Q80YE7 1442 aa28.53■■■□□ 2.16
Trp53rka-201ENSMUST00000039007 Stk26Q99JT2 416 aa28.51■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Cps1Q8C196 1500 aa28.51■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Utp14aQ640M1 767 aaKnown RBP28.51■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Ppargc1bQ8VHJ7 1014 aa28.51■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 HnrnpmQ9D0E1 729 aaKnown RBP28.49■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Tns3Q5SSZ5 1440 aa28.48■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 RalgapbQ8BQZ4 1484 aa28.47■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Rundc1Q0VDN7 615 aa28.46■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Ift172Q6VH22 1749 aa28.46■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 Usp40Q8BWR4 1235 aa28.46■■■□□ 2.15
Trp53rka-201ENSMUST00000039007 IqubQ8CDK3 788 aa28.44■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 DnmbpQ6TXD4 1580 aa28.44■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Plekhg1F6S200 1446 aa28.44■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Cep170bQ80U49 1574 aa28.43■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Card11Q8CIS0 1159 aa28.43■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Nphp4P59240 1425 aa28.43■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Stard8Q8K031 1019 aa28.42■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Col18a1P39061 1774 aa28.4■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Stag3O70576 1240 aa28.39■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Unc13bQ9Z1N9 1602 aa28.39■■■□□ 2.14
Trp53rka-201ENSMUST00000039007 Gtf2e1Q9D0D5 440 aa28.37■■■□□ 2.13
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms