RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 Pank1Q8K4K6 548 aa13.11□□□□□ -0.31
Stra6-201ENSMUST00000034880 Arid4bA2CG63 1314 aaKnown RBP13.1□□□□□ -0.31
Stra6-201ENSMUST00000034880 Pbrm1Q8BSQ9 1634 aaKnown RBP13.1□□□□□ -0.31
Stra6-201ENSMUST00000034880 Ssh2Q5SW75 1423 aa13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Cd109Q8R422 1442 aa13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Rab3gap2Q8BMG7 1366 aa13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Mapkbp1Q6NS57 1503 aa13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Jph4Q80WT0 628 aa13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Mroh2aD3Z750 1679 aa13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Clasp1Q80TV8 1535 aaKnown RBP13.09□□□□□ -0.31
Stra6-201ENSMUST00000034880 Prdm10Q3UTQ7 1184 aa13.08□□□□□ -0.31
Stra6-201ENSMUST00000034880 AU015836B2RUM3 263 aa13.08□□□□□ -0.32
Stra6-201ENSMUST00000034880 Dnttip2Q8R2M2 758 aaKnown RBP13.08□□□□□ -0.32
Stra6-201ENSMUST00000034880 Rlbp1Q9Z275 317 aa13.08□□□□□ -0.32
Stra6-201ENSMUST00000034880 Usp19Q3UJD6 1360 aa13.07□□□□□ -0.32
Stra6-201ENSMUST00000034880 Zmym3Q9JLM4 1370 aa13.07□□□□□ -0.32
Stra6-201ENSMUST00000034880 Mlh3A0A1Y7VMP7 1443 aa13.07□□□□□ -0.32
Stra6-201ENSMUST00000034880 AknaQ80VW7 1404 aa13.07□□□□□ -0.32
Stra6-201ENSMUST00000034880 Fam184bQ0KK56 942 aa13.07□□□□□ -0.32
Stra6-201ENSMUST00000034880 Rrbp1Q99PL5 1605 aaKnown RBP13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Nlrp6Q91WS2 869 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Neo1P97798 1493 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Kdm2aP59997 1161 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 KarsQ99MN1 595 aaKnown RBP13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Gm16486A0A1D5RMD1 1434 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Gm14025A2AP89 1413 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Fmn2Q9JL04 1578 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Lrrc9Q8CDN9 1456 aa13.06□□□□□ -0.32
Stra6-201ENSMUST00000034880 Adamts13Q769J6 1426 aa13.05□□□□□ -0.32
Stra6-201ENSMUST00000034880 Htatsf1Q8BGC0 757 aa13.05□□□□□ -0.32
Stra6-201ENSMUST00000034880 Gtf2a1Q99PM3 378 aa13.05□□□□□ -0.32
Stra6-201ENSMUST00000034880 Tnpo1Q8BFY9 898 aaKnown RBP13.04□□□□□ -0.32
Stra6-201ENSMUST00000034880 Clstn2Q9ER65 966 aa13.04□□□□□ -0.32
Stra6-201ENSMUST00000034880 Kif7B7ZNG0 1348 aa13.04□□□□□ -0.32
Stra6-201ENSMUST00000034880 Rtn4Q99P72 1162 aaKnown RBP13.04□□□□□ -0.32
Stra6-201ENSMUST00000034880 Srcin1Q9QWI6 1250 aa13.04□□□□□ -0.32
Stra6-201ENSMUST00000034880 Lrriq1Q0P5X1 1673 aa13.04□□□□□ -0.32
Stra6-201ENSMUST00000034880 Duxf3A0A0N4SV92 674 aa13.03□□□□□ -0.32
Stra6-201ENSMUST00000034880 Caskin1Q6P9K8 1431 aa13.03□□□□□ -0.32
Stra6-201ENSMUST00000034880 Tmc1Q8R4P5 757 aa13.03□□□□□ -0.32
Stra6-201ENSMUST00000034880 Atf7ipQ7TT18 1306 aa13.03□□□□□ -0.32
Stra6-201ENSMUST00000034880 Sptbn5F6UCX4 1208 aa13.02□□□□□ -0.32
Stra6-201ENSMUST00000034880 Pnmal2G3X9N3 661 aa13.02□□□□□ -0.32
Stra6-201ENSMUST00000034880 Polr3glQ8R0C0 218 aa13.02□□□□□ -0.32
Stra6-201ENSMUST00000034880 Trappc8E9PWG2 1437 aa13.02□□□□□ -0.33
Stra6-201ENSMUST00000034880 Erich6D3Z6S9 713 aa13.02□□□□□ -0.33
Stra6-201ENSMUST00000034880 Golga2Q921M4 999 aa13.01□□□□□ -0.33
Stra6-201ENSMUST00000034880 Sbno1Q689Z5 1390 aa13.01□□□□□ -0.33
Stra6-201ENSMUST00000034880 Atxn3Q9CVD2 355 aa13□□□□□ -0.33
Stra6-201ENSMUST00000034880 Sart1Q9Z315 806 aaKnown RBP12.99□□□□□ -0.33
Stra6-201ENSMUST00000034880 Trim26Q99PN3 545 aa12.99□□□□□ -0.33
Stra6-201ENSMUST00000034880 Antxr1Q9CZ52 562 aa12.99□□□□□ -0.33
Stra6-201ENSMUST00000034880 Adgrl2Q8JZZ7 1487 aa12.98□□□□□ -0.33
Stra6-201ENSMUST00000034880 Znf521Q6KAS7 1311 aa12.98□□□□□ -0.33
Stra6-201ENSMUST00000034880 Ppp2r3aB2RXC8 1150 aa12.98□□□□□ -0.33
Stra6-201ENSMUST00000034880 Taok2Q6ZQ29 1240 aa12.98□□□□□ -0.33
Stra6-201ENSMUST00000034880 Os9Q8K2C7 672 aa12.98□□□□□ -0.33
Stra6-201ENSMUST00000034880 Sall3Q62255 1320 aa12.97□□□□□ -0.33
Stra6-201ENSMUST00000034880 Fancd2Q80V62 1450 aa12.97□□□□□ -0.33
Stra6-201ENSMUST00000034880 Uspl1Q3ULM6 1089 aa12.96□□□□□ -0.33
Stra6-201ENSMUST00000034880 Trim58Q5NCC9 485 aa12.96□□□□□ -0.33
Stra6-201ENSMUST00000034880 Kiaa1107Q80TK0 1369 aa12.96□□□□□ -0.33
Stra6-201ENSMUST00000034880 Col17a1Q07563 1470 aa12.96□□□□□ -0.33
Stra6-201ENSMUST00000034880 Rusc2Q80U22 1514 aa12.96□□□□□ -0.33
Stra6-201ENSMUST00000034880 Il4rP16382 810 aa12.96□□□□□ -0.33
Stra6-201ENSMUST00000034880 Zcchc11B2RX14 1644 aaKnown RBP12.96□□□□□ -0.34
Stra6-201ENSMUST00000034880 Paxip1Q6NZQ4 1056 aa12.96□□□□□ -0.34
Stra6-201ENSMUST00000034880 Cluap1Q8R3P7 413 aa12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 Phf14Q9D4H9 881 aa12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 AampJ3QN89 436 aa12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 Rabep1O35551 862 aa12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 Ralbp1Q62172 648 aa12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 Rrp9Q91WM3 475 aaKnown RBP12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 Tulp4Q9JIL5 1547 aa12.95□□□□□ -0.34
Stra6-201ENSMUST00000034880 Catsper2A2ARP9 588 aa12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Mfap1aC0HKD8 439 aaKnown RBP12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Mfap1bC0HKD9 439 aaKnown RBP12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Arhgap5P97393 1501 aa12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Fgd6Q69ZL1 1399 aa12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Cnga1P29974 684 aa12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Pde4cQ3UEI1 686 aa12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Edc4Q3UJB9 1406 aaKnown RBP12.94□□□□□ -0.34
Stra6-201ENSMUST00000034880 Ppip5k1A2ARP1 1436 aa12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Fam208aQ69ZR9 1610 aaKnown RBP12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Tbc1d32Q3URV1 1296 aa12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Dnmt1P13864 1620 aaKnown RBP12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Mcm4P49717 862 aa12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Ssh1Q76I79 1042 aa12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Ppp1r3fQ9JIG4 799 aa12.93□□□□□ -0.34
Stra6-201ENSMUST00000034880 Spag9Q58A65 1321 aaKnown RBP12.92□□□□□ -0.34
Stra6-201ENSMUST00000034880 Ylpm1Q9R0I7 1386 aaKnown RBP12.92□□□□□ -0.34
Stra6-201ENSMUST00000034880 Gm20521D3Z5F7 333 aa12.91□□□□□ -0.34
Stra6-201ENSMUST00000034880 Cep170Q6A065 1588 aa12.91□□□□□ -0.34
Stra6-201ENSMUST00000034880 Rangap1P46061 589 aaKnown RBP12.9□□□□□ -0.34
Stra6-201ENSMUST00000034880 DmtnQ9WV69 405 aa12.9□□□□□ -0.35
Stra6-201ENSMUST00000034880 Pola1P33609 1465 aa12.89□□□□□ -0.35
Stra6-201ENSMUST00000034880 Kif20aP97329 887 aa12.89□□□□□ -0.35
Stra6-201ENSMUST00000034880 Kif2cQ922S8 721 aa12.89□□□□□ -0.35
Stra6-201ENSMUST00000034880 Map3k5O35099 1380 aa12.88□□□□□ -0.35
Stra6-201ENSMUST00000034880 Plcb2A3KGF7 1181 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms