RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Synj2Q9D2G5 1434 aa31.5■■■□□ 2.63
Cln6-201ENSMUST00000034776 Csrnp3P59055 597 aa31.5■■■□□ 2.63
Cln6-201ENSMUST00000034776 Rims1Q99NE5 1463 aa31.5■■■□□ 2.63
Cln6-201ENSMUST00000034776 Kdm2aP59997 1161 aa31.49■■■□□ 2.63
Cln6-201ENSMUST00000034776 Efcab6Q6P1E8 1516 aa31.49■■■□□ 2.63
Cln6-201ENSMUST00000034776 Slc24a1Q91WD8 1130 aa31.48■■■□□ 2.63
Cln6-201ENSMUST00000034776 Ino80Q6ZPV2 1559 aa31.47■■■□□ 2.63
Cln6-201ENSMUST00000034776 Srcin1Q9QWI6 1250 aa31.45■■■□□ 2.63
Cln6-201ENSMUST00000034776 Hecw2Q6I6G8 1578 aa31.45■■■□□ 2.63
Cln6-201ENSMUST00000034776 Zbtb4Q5F293 982 aa31.45■■■□□ 2.62
Cln6-201ENSMUST00000034776 Pola1P33609 1465 aa31.45■■■□□ 2.62
Cln6-201ENSMUST00000034776 Talpid3E9PV87 1520 aa31.44■■■□□ 2.62
Cln6-201ENSMUST00000034776 Adamts7Q68SA9 1657 aa31.43■■■□□ 2.62
Cln6-201ENSMUST00000034776 Myom2Q14BI5 1463 aa31.41■■■□□ 2.62
Cln6-201ENSMUST00000034776 Gm20521D3Z5F7 333 aa31.41■■■□□ 2.62
Cln6-201ENSMUST00000034776 Myo3aQ8K3H5 1613 aa31.41■■■□□ 2.62
Cln6-201ENSMUST00000034776 Cfap65Q3V0B4 1847 aa31.4■■■□□ 2.62
Cln6-201ENSMUST00000034776 NrdcQ8BHG1 1161 aa31.39■■■□□ 2.61
Cln6-201ENSMUST00000034776 Cdk5rap2Q8K389 1822 aa31.38■■■□□ 2.61
Cln6-201ENSMUST00000034776 PrxO55103 1391 aa31.36■■■□□ 2.61
Cln6-201ENSMUST00000034776 Sbno1Q689Z5 1390 aa31.36■■■□□ 2.61
Cln6-201ENSMUST00000034776 Knl1Q66JQ7 1612 aa31.35■■■□□ 2.61
Cln6-201ENSMUST00000034776 Srpk2O54781 681 aaKnown RBP31.34■■■□□ 2.61
Cln6-201ENSMUST00000034776 Stard8Q8K031 1019 aa31.34■■■□□ 2.61
Cln6-201ENSMUST00000034776 Pank3Q8R2W9 370 aa31.33■■■□□ 2.61
Cln6-201ENSMUST00000034776 Os9Q8K2C7 672 aa31.32■■■□□ 2.6
Cln6-201ENSMUST00000034776 Fan1Q69ZT1 1020 aa31.3■■■□□ 2.6
Cln6-201ENSMUST00000034776 Uggt1Q6P5E4 1551 aa31.3■■■□□ 2.6
Cln6-201ENSMUST00000034776 Itsn2Q9Z0R6 1659 aa31.3■■■□□ 2.6
Cln6-201ENSMUST00000034776 Nphp4P59240 1425 aa31.3■■■□□ 2.6
Cln6-201ENSMUST00000034776 Mroh1E0CZ22 1640 aa31.28■■■□□ 2.6
Cln6-201ENSMUST00000034776 Sipa1l1Q8C0T5 1782 aa31.27■■■□□ 2.6
Cln6-201ENSMUST00000034776 Usp40Q8BWR4 1235 aa31.27■■■□□ 2.6
Cln6-201ENSMUST00000034776 Gtf2e1Q9D0D5 440 aa31.27■■■□□ 2.6
Cln6-201ENSMUST00000034776 AU022751B1B0V2 589 aa31.27■■■□□ 2.6
Cln6-201ENSMUST00000034776 DnmbpQ6TXD4 1580 aa31.26■■■□□ 2.59
Cln6-201ENSMUST00000034776 Plxnc1Q9QZC2 1574 aa31.25■■■□□ 2.59
Cln6-201ENSMUST00000034776 Skint5A7XUY5 1461 aa31.24■■■□□ 2.59
Cln6-201ENSMUST00000034776 Inpp5dQ9ES52 1191 aa31.24■■■□□ 2.59
Cln6-201ENSMUST00000034776 Arid4bA2CG63 1314 aaKnown RBP31.24■■■□□ 2.59
Cln6-201ENSMUST00000034776 Zmym4A2A791 1549 aaKnown RBP31.24■■■□□ 2.59
Cln6-201ENSMUST00000034776 Tmf1B9EKI3 1091 aa31.24■■■□□ 2.59
Cln6-201ENSMUST00000034776 Ttbk1Q6PCN3 1308 aa31.23■■■□□ 2.59
Cln6-201ENSMUST00000034776 Puf60Q3UEB3 564 aaKnown RBP31.21■■■□□ 2.59
Cln6-201ENSMUST00000034776 Zscan10Q3URR7 782 aa31.21■■■□□ 2.59
Cln6-201ENSMUST00000034776 Rsph4aQ8BYM7 716 aa31.2■■■□□ 2.59
Cln6-201ENSMUST00000034776 Slc4a1apE9PX68 744 aa31.17■■■□□ 2.58
Cln6-201ENSMUST00000034776 Gm16486A0A1D5RMD1 1434 aa31.17■■■□□ 2.58
Cln6-201ENSMUST00000034776 Hfm1D3Z4R1 1434 aa31.17■■■□□ 2.58
Cln6-201ENSMUST00000034776 Anp32bQ9EST5 272 aaKnown RBP31.16■■■□□ 2.58
Cln6-201ENSMUST00000034776 Fam184bQ0KK56 942 aa31.15■■■□□ 2.58
Cln6-201ENSMUST00000034776 Rpgrip1lQ8CG73 1264 aa31.15■■■□□ 2.58
Cln6-201ENSMUST00000034776 Ahdc1Q6PAL7 1594 aaKnown RBP31.14■■■□□ 2.58
Cln6-201ENSMUST00000034776 Myom1Q62234 1667 aaKnown RBP31.14■■■□□ 2.58
Cln6-201ENSMUST00000034776 Slc52a2Q9D8F3 450 aa31.13■■■□□ 2.57
Cln6-201ENSMUST00000034776 NpatQ8BMA5 1420 aa31.13■■■□□ 2.57
Cln6-201ENSMUST00000034776 Afap1Q80YS6 731 aa31.12■■■□□ 2.57
Cln6-201ENSMUST00000034776 Aplp2Q06335 707 aa31.09■■■□□ 2.57
Cln6-201ENSMUST00000034776 Qser1A2BIE1 1698 aa31.08■■■□□ 2.57
Cln6-201ENSMUST00000034776 PalldQ9ET54 1408 aa31.06■■■□□ 2.56
Cln6-201ENSMUST00000034776 Prrc2bQ7TPM1 1486 aaKnown RBP31.06■■■□□ 2.56
Cln6-201ENSMUST00000034776 Ift172Q6VH22 1749 aa31.06■■■□□ 2.56
Cln6-201ENSMUST00000034776 Arhgap23Q69ZH9 1483 aa31.06■■■□□ 2.56
Cln6-201ENSMUST00000034776 CltcQ68FD5 1675 aaKnown RBP31.05■■■□□ 2.56
Cln6-201ENSMUST00000034776 Lrrc7Q80TE7 1490 aa31.04■■■□□ 2.56
Cln6-201ENSMUST00000034776 Zscan21Q07231 555 aa31.04■■■□□ 2.56
Cln6-201ENSMUST00000034776 PtprmP28828 1452 aa31.03■■■□□ 2.56
Cln6-201ENSMUST00000034776 Kdm5aQ3UXZ9 1690 aa31.02■■■□□ 2.56
Cln6-201ENSMUST00000034776 Tex14Q7M6U3 1450 aa31.02■■■□□ 2.56
Cln6-201ENSMUST00000034776 1700123L14RikQ3V2K7 440 aa31.02■■■□□ 2.56
Cln6-201ENSMUST00000034776 Q7TT23 1179 aa31.02■■■□□ 2.56
Cln6-201ENSMUST00000034776 RictorQ6QI06 1708 aa30.98■■■□□ 2.55
Cln6-201ENSMUST00000034776 Stag3O70576 1240 aa30.97■■■□□ 2.55
Cln6-201ENSMUST00000034776 Kif13aQ9EQW7 1749 aa30.97■■■□□ 2.55
Cln6-201ENSMUST00000034776 MaddQ80U28 1577 aa30.96■■■□□ 2.55
Cln6-201ENSMUST00000034776 Itsn1Q9Z0R4 1714 aa30.95■■■□□ 2.55
Cln6-201ENSMUST00000034776 Ofd1Q80Z25 1017 aa30.95■■■□□ 2.54
Cln6-201ENSMUST00000034776 IqubQ8CDK3 788 aa30.94■■■□□ 2.54
Cln6-201ENSMUST00000034776 Ppp2r1aQ76MZ3 589 aa30.93■■■□□ 2.54
Cln6-201ENSMUST00000034776 Naip7Q9JIB3 1402 aa30.9■■■□□ 2.54
Cln6-201ENSMUST00000034776 InsrP15208 1372 aa30.89■■■□□ 2.54
Cln6-201ENSMUST00000034776 Rab3gap2Q8BMG7 1366 aa30.89■■■□□ 2.54
Cln6-201ENSMUST00000034776 Eif5bQ05D44 1216 aaKnown RBP30.88■■■□□ 2.53
Cln6-201ENSMUST00000034776 Gprasp1Q5U4C1 1347 aa30.88■■■□□ 2.53
Cln6-201ENSMUST00000034776 Calr4Q3TQS0 420 aa30.88■■■□□ 2.53
Cln6-201ENSMUST00000034776 Mak16Q8BGS0 296 aaKnown RBP30.86■■■□□ 2.53
Cln6-201ENSMUST00000034776 SafbD3YXK2 937 aaKnown RBP30.86■■■□□ 2.53
Cln6-201ENSMUST00000034776 Shq1Q7TMX5 569 aa30.85■■■□□ 2.53
Cln6-201ENSMUST00000034776 Kif7B7ZNG0 1348 aa30.84■■■□□ 2.53
Cln6-201ENSMUST00000034776 CenpjQ569L8 1344 aa30.84■■■□□ 2.53
Cln6-201ENSMUST00000034776 Arhgef28P97433 1693 aa30.84■■■□□ 2.53
Cln6-201ENSMUST00000034776 Ercc6l2Q9JIM3 1537 aa30.82■■■□□ 2.52
Cln6-201ENSMUST00000034776 Dcaf11Q91VU6 549 aa30.82■■■□□ 2.52
Cln6-201ENSMUST00000034776 Atf7ipQ7TT18 1306 aa30.81■■■□□ 2.52
Cln6-201ENSMUST00000034776 Atp1b4Q99ME6 356 aa30.8■■■□□ 2.52
Cln6-201ENSMUST00000034776 Dnajc5gQ8C632 165 aa30.79■■■□□ 2.52
Cln6-201ENSMUST00000034776 Adamtsl3G3UXC7 1706 aa30.79■■■□□ 2.52
Cln6-201ENSMUST00000034776 Stk26Q99JT2 416 aa30.77■■■□□ 2.52
Cln6-201ENSMUST00000034776 Med14A2ABV5 1459 aaKnown RBP30.77■■■□□ 2.52
Cln6-201ENSMUST00000034776 Zc3h13E9Q784 1729 aaKnown RBP30.77■■■□□ 2.52
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms