RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Ylpm1Q9R0I7 1386 aaKnown RBP16.97■□□□□ 0.31
Vps35-201ENSMUST00000034131 Mfap1aC0HKD8 439 aaKnown RBP16.97■□□□□ 0.31
Vps35-201ENSMUST00000034131 Mfap1bC0HKD9 439 aaKnown RBP16.97■□□□□ 0.31
Vps35-201ENSMUST00000034131 Arhgef40Q3UPH7 1517 aa16.97■□□□□ 0.31
Vps35-201ENSMUST00000034131 Tbc1d32Q3URV1 1296 aa16.97■□□□□ 0.31
Vps35-201ENSMUST00000034131 SphkapQ6NSW3 1687 aa16.96■□□□□ 0.31
Vps35-201ENSMUST00000034131 Zfp91Q62511 572 aa16.95■□□□□ 0.3
Vps35-201ENSMUST00000034131 Polr3glQ8R0C0 218 aa16.95■□□□□ 0.3
Vps35-201ENSMUST00000034131 Pdia4P08003 638 aaKnown RBP16.95■□□□□ 0.3
Vps35-201ENSMUST00000034131 Trim58Q5NCC9 485 aa16.94■□□□□ 0.3
Vps35-201ENSMUST00000034131 Rlbp1Q9Z275 317 aa16.94■□□□□ 0.3
Vps35-201ENSMUST00000034131 Slc4a1apE9PX68 744 aa16.94■□□□□ 0.3
Vps35-201ENSMUST00000034131 VgfQ0VGU4 617 aa16.94■□□□□ 0.3
Vps35-201ENSMUST00000034131 Rab3gap2Q8BMG7 1366 aa16.93■□□□□ 0.3
Vps35-201ENSMUST00000034131 Gapvd1Q6PAR5 1458 aa16.93■□□□□ 0.3
Vps35-201ENSMUST00000034131 Terf2O35144 541 aa16.93■□□□□ 0.3
Vps35-201ENSMUST00000034131 Nom1Q3UFM5 854 aaKnown RBP16.93■□□□□ 0.3
Vps35-201ENSMUST00000034131 Ifit1bl1D3Z6F0 470 aa16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Golga2Q921M4 999 aa16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Kdm5cP41230 1554 aa16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Duxf3A0A0N4SV92 674 aa16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Rrp7aQ9D1C9 280 aaKnown RBP16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Gm14025A2AP89 1413 aa16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Plch2A2AP18 1501 aa16.91■□□□□ 0.3
Vps35-201ENSMUST00000034131 Irf5P56477 497 aa16.9■□□□□ 0.3
Vps35-201ENSMUST00000034131 Ncoa3O09000 1398 aa16.9■□□□□ 0.3
Vps35-201ENSMUST00000034131 Vsig10D3YX43 558 aa16.9■□□□□ 0.3
Vps35-201ENSMUST00000034131 BccipQ9CWI3 316 aa16.9■□□□□ 0.3
Vps35-201ENSMUST00000034131 Erich6bQ9D4S6 220 aa16.9■□□□□ 0.3
Vps35-201ENSMUST00000034131 Atf7ipQ7TT18 1306 aa16.89■□□□□ 0.29
Vps35-201ENSMUST00000034131 Eif4g3Q80XI3 1579 aaKnown RBP16.89■□□□□ 0.29
Vps35-201ENSMUST00000034131 Stard8Q8K031 1019 aa16.89■□□□□ 0.29
Vps35-201ENSMUST00000034131 Ralbp1Q62172 648 aa16.88■□□□□ 0.29
Vps35-201ENSMUST00000034131 Clasp1Q80TV8 1535 aaKnown RBP16.88■□□□□ 0.29
Vps35-201ENSMUST00000034131 Dhx16G3X8X0 1044 aaKnown RBP16.88■□□□□ 0.29
Vps35-201ENSMUST00000034131 Kdm6bQ5NCY0 1641 aa16.88■□□□□ 0.29
Vps35-201ENSMUST00000034131 Rsph3aQ3UFY4 516 aa16.87■□□□□ 0.29
Vps35-201ENSMUST00000034131 Gtf3c5Q8R2T8 520 aa16.87■□□□□ 0.29
Vps35-201ENSMUST00000034131 Rfx1P48377 963 aa16.87■□□□□ 0.29
Vps35-201ENSMUST00000034131 Cluap1Q8R3P7 413 aa16.87■□□□□ 0.29
Vps35-201ENSMUST00000034131 Atl3Q91YH5 541 aa16.87■□□□□ 0.29
Vps35-201ENSMUST00000034131 Supt6hQ62383 1726 aaKnown RBP16.87■□□□□ 0.29
Vps35-201ENSMUST00000034131 Fam184bQ0KK56 942 aa16.86■□□□□ 0.29
Vps35-201ENSMUST00000034131 Arhgap31A6X8Z5 1425 aa16.85■□□□□ 0.29
Vps35-201ENSMUST00000034131 Tnnt2P50752 301 aa16.85■□□□□ 0.29
Vps35-201ENSMUST00000034131 Znf316Q6PGE4 1016 aa16.85■□□□□ 0.29
Vps35-201ENSMUST00000034131 Ripk4Q9ERK0 786 aa16.85■□□□□ 0.29
Vps35-201ENSMUST00000034131 Ush1cQ9ES64 910 aa16.85■□□□□ 0.29
Vps35-201ENSMUST00000034131 Map7O88735 730 aa16.84■□□□□ 0.29
Vps35-201ENSMUST00000034131 Trim26Q99PN3 545 aa16.84■□□□□ 0.29
Vps35-201ENSMUST00000034131 Znf521Q6KAS7 1311 aa16.84■□□□□ 0.29
Vps35-201ENSMUST00000034131 Gas2l2Q5SSG4 860 aa16.84■□□□□ 0.29
Vps35-201ENSMUST00000034131 Gse1Q3U3C9 1213 aa16.83■□□□□ 0.28
Vps35-201ENSMUST00000034131 Clstn2Q9ER65 966 aa16.83■□□□□ 0.28
Vps35-201ENSMUST00000034131 Pnmal2G3X9N3 661 aa16.83■□□□□ 0.28
Vps35-201ENSMUST00000034131 WrnO09053 1401 aa16.82■□□□□ 0.28
Vps35-201ENSMUST00000034131 Phlpp2Q8BXA7 1320 aa16.81■□□□□ 0.28
Vps35-201ENSMUST00000034131 Cc2d2bA0A286YDU8 1405 aa16.81■□□□□ 0.28
Vps35-201ENSMUST00000034131 Kif7B7ZNG0 1348 aa16.8■□□□□ 0.28
Vps35-201ENSMUST00000034131 Srcin1Q9QWI6 1250 aa16.8■□□□□ 0.28
Vps35-201ENSMUST00000034131 Usp19Q3UJD6 1360 aa16.8■□□□□ 0.28
Vps35-201ENSMUST00000034131 PtmaP26350 111 aa16.8■□□□□ 0.28
Vps35-201ENSMUST00000034131 Becn1O88597 448 aa16.79■□□□□ 0.28
Vps35-201ENSMUST00000034131 Setd1aE9PYH6 1716 aa16.79■□□□□ 0.28
Vps35-201ENSMUST00000034131 Adcy10Q8C0T9 1614 aa16.79■□□□□ 0.28
Vps35-201ENSMUST00000034131 Prdm10Q3UTQ7 1184 aa16.79■□□□□ 0.28
Vps35-201ENSMUST00000034131 Tubgcp6G5E8P0 1769 aa16.78■□□□□ 0.28
Vps35-201ENSMUST00000034131 Ddit3P35639 168 aa16.78■□□□□ 0.28
Vps35-201ENSMUST00000034131 Pdcl2Q78Y63 240 aa16.78■□□□□ 0.28
Vps35-201ENSMUST00000034131 Erbb4Q61527 1308 aa16.78■□□□□ 0.28
Vps35-201ENSMUST00000034131 Tarbp1E9Q368 1579 aa16.78■□□□□ 0.28
Vps35-201ENSMUST00000034131 Nsfl1cQ9CZ44 370 aaKnown RBP16.78■□□□□ 0.28
Vps35-201ENSMUST00000034131 Pla2r1Q62028 1487 aa16.77■□□□□ 0.27
Vps35-201ENSMUST00000034131 Uspl1Q3ULM6 1089 aa16.77■□□□□ 0.27
Vps35-201ENSMUST00000034131 Fbxo2Q80UW2 297 aa16.77■□□□□ 0.27
Vps35-201ENSMUST00000034131 Tdrd9Q14BI7 1383 aa16.77■□□□□ 0.27
Vps35-201ENSMUST00000034131 Lekr1B2RVN1 116 aa16.76■□□□□ 0.27
Vps35-201ENSMUST00000034131 Kif2cQ922S8 721 aa16.76■□□□□ 0.27
Vps35-201ENSMUST00000034131 Fez1Q8K0X8 392 aa16.75■□□□□ 0.27
Vps35-201ENSMUST00000034131 Kdm2aP59997 1161 aa16.75■□□□□ 0.27
Vps35-201ENSMUST00000034131 Iqgap1Q9JKF1 1657 aaKnown RBP16.75■□□□□ 0.27
Vps35-201ENSMUST00000034131 Gm16486A0A1D5RMD1 1434 aa16.75■□□□□ 0.27
Vps35-201ENSMUST00000034131 Sbno1Q689Z5 1390 aa16.75■□□□□ 0.27
Vps35-201ENSMUST00000034131 Dot1lQ6XZL8 1540 aa16.74■□□□□ 0.27
Vps35-201ENSMUST00000034131 Os9Q8K2C7 672 aa16.74■□□□□ 0.27
Vps35-201ENSMUST00000034131 Ksr2Q3UVC0 959 aa16.73■□□□□ 0.27
Vps35-201ENSMUST00000034131 Dhx30Q99PU8 1217 aaKnown RBP16.73■□□□□ 0.27
Vps35-201ENSMUST00000034131 Atxn3Q9CVD2 355 aa16.73■□□□□ 0.27
Vps35-201ENSMUST00000034131 Fam43aQ8BUP8 424 aa16.73■□□□□ 0.27
Vps35-201ENSMUST00000034131 KnstrnQ9D9Z1 312 aaKnown RBP16.73■□□□□ 0.27
Vps35-201ENSMUST00000034131 Ccdc141E9Q8Q6 1531 aa16.72■□□□□ 0.27
Vps35-201ENSMUST00000034131 Kif18aQ91WD7 886 aa16.72■□□□□ 0.27
Vps35-201ENSMUST00000034131 Rrbp1Q99PL5 1605 aaKnown RBP16.72■□□□□ 0.27
Vps35-201ENSMUST00000034131 Trpm2Q91YD4 1506 aa16.72■□□□□ 0.27
Vps35-201ENSMUST00000034131 Vgll3P85442 326 aa16.72■□□□□ 0.27
Vps35-201ENSMUST00000034131 Rusc2Q80U22 1514 aa16.71■□□□□ 0.27
Vps35-201ENSMUST00000034131 Fam135bQ9DAI6 1403 aa16.7■□□□□ 0.26
Vps35-201ENSMUST00000034131 Scaf1Q5U4C3 1256 aaKnown RBP16.7■□□□□ 0.26
Vps35-201ENSMUST00000034131 Cog6Q8R3I3 657 aa16.7■□□□□ 0.26
Vps35-201ENSMUST00000034131 Mknk2Q8CDB0 459 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms