RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Hmox1P14901 289 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Cplx2P84086 134 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Mad1l1Q9WTX8 717 aaKnown RBP17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 CntlnA2AM05 1397 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 GsdmaQ9EST1 446 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Ush1cQ9ES64 910 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Sart1Q9Z315 806 aaKnown RBP17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nutm1Q8BHP2 1126 aa17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nectin2P32507 530 aa17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Sycp1Q62209 993 aa17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Ipo7Q9EPL8 1038 aaKnown RBP17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nap1l1P28656 391 aaKnown RBP17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Baz1bQ9Z277 1479 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Plekhh2Q8C115 1491 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Kif7B7ZNG0 1348 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Dixdc1Q80Y83 711 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Q8C5K5 320 aa17.45■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Evc2Q8K1G2 1220 aa17.45■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Map7d2A2AG50 781 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 KinQ8K339 391 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Kdm5dQ62240 1548 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Fyb1O35601 819 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Fbxo2Q80UW2 297 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Usp16Q99LG0 825 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Stk3Q9JI10 497 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Cep162Q6ZQ06 1403 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 PogkQ80TC5 607 aa17.42■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Esx1O88933 382 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Smc3Q9CW03 1217 aaKnown RBP17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ric3Q8BPM6 367 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ccdc34Q3UI66 367 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Erich4Q3UNU4 136 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ak7Q9D2H2 614 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Usp48Q3V0C5 1052 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Rad54l2Q99NG0 1466 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Stk11ipQ3TAA7 1072 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Gtf3c3Q3TMP1 882 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Rufy1Q8BIJ7 712 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Kif4P33174 1231 aa17.39■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ccdc88bQ4QRL3 1481 aa17.39■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Taf3Q5HZG4 932 aa17.39■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Q9D2X8 372 aa17.39■□□□□ 0.37
Col4a1-201ENSMUST00000033898 A0A1L1SQF0 893 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Me1P06801 572 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Gripap1Q8VD04 806 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Pnmal2G3X9N3 661 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Cfdp1O88271 295 aaKnown RBP17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Znhit6Q3UFB2 460 aaKnown RBP17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rbm5Q91YE7 815 aaKnown RBP17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rnf20Q5DTM8 973 aa17.37■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Gpatch3Q8BIY1 525 aa17.37■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Usp47Q8BY87 1376 aa17.37■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Hook1Q8BIL5 728 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Commd10Q8JZY2 202 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Themis2Q91YX0 663 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Kdm4aQ8BW72 1064 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Gcom1E9PZ54 550 aa17.35■□□□□ 0.37
Col4a1-201ENSMUST00000033898 MyzapQ3UIJ9 466 aa17.35■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Babam1Q3UI43 333 aa17.35■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Zpr1Q62384 459 aa17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Pdcl3Q8BVF2 240 aa17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Mphosph10Q810V0 681 aaKnown RBP17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Zrsr2Q62377 462 aaKnown RBP17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Ttll5Q8CHB8 1328 aa17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 HmmrQ00547 794 aaKnown RBP17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rock1P70335 1354 aa17.33■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rnf214Q8BFU3 668 aaKnown RBP17.33■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Tmc1Q8R4P5 757 aa17.33■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Ccnb3Q810T2 1396 aa17.33■□□□□ 0.36
Col4a1-201ENSMUST00000033898 PhaxQ9JJT9 385 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 NexnQ7TPW1 607 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Stard8Q8K031 1019 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Pank1Q8K4K6 548 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Fam184bQ0KK56 942 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 IkQ9Z1M8 557 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 MycnP03966 462 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Ppp4r3bQ922R5 820 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Dhx57Q6P5D3 1388 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rab11fip3Q8CHD8 1047 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Sf3b2Q3UJB0 878 aaKnown RBP17.31■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Gm10471E9Q1C7 252 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Sirt1Q923E4 737 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Cep89Q9CZX2 791 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Mre11Q61216 706 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rbm28Q8CGC6 750 aaKnown RBP17.29■□□□□ 0.36
Col4a1-201ENSMUST00000033898 KarsQ99MN1 595 aaKnown RBP17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Trim29Q8R2Q0 587 aa17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Erc2Q6PH08 957 aa17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Sv2bQ8BG39 683 aa17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Smg6P61406 1418 aaKnown RBP17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rbm25B2RY56 838 aaKnown RBP17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Nek4Q9Z1J2 792 aa17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Ralbp1Q62172 648 aa17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Glipr1l2Q9CQ35 332 aa17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rsph4aQ8BYM7 716 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Necab1Q8BG18 352 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Atf3Q60765 181 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 UvssaQ9D479 717 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Shroom4Q1W617 1475 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Cfap99A0A140LIX9 648 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms