RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Hmox1P14901 289 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Cplx2P84086 134 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Mad1l1Q9WTX8 717 aaKnown RBP17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 CntlnA2AM05 1397 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 GsdmaQ9EST1 446 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Ush1cQ9ES64 910 aa17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Sart1Q9Z315 806 aaKnown RBP17.48■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nutm1Q8BHP2 1126 aa17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nectin2P32507 530 aa17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Sycp1Q62209 993 aa17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Ipo7Q9EPL8 1038 aaKnown RBP17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nap1l1P28656 391 aaKnown RBP17.47■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Baz1bQ9Z277 1479 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Plekhh2Q8C115 1491 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Kif7B7ZNG0 1348 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Dixdc1Q80Y83 711 aa17.46■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Q8C5K5 320 aa17.45■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Evc2Q8K1G2 1220 aa17.45■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Map7d2A2AG50 781 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 KinQ8K339 391 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Kdm5dQ62240 1548 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Fyb1O35601 819 aa17.44■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Fbxo2Q80UW2 297 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Usp16Q99LG0 825 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Stk3Q9JI10 497 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Cep162Q6ZQ06 1403 aa17.43■□□□□ 0.38
Col4a1-201ENSMUST00000033898 PogkQ80TC5 607 aa17.42■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Esx1O88933 382 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Smc3Q9CW03 1217 aaKnown RBP17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ric3Q8BPM6 367 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ccdc34Q3UI66 367 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Erich4Q3UNU4 136 aa17.41■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ak7Q9D2H2 614 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Usp48Q3V0C5 1052 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Rad54l2Q99NG0 1466 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Stk11ipQ3TAA7 1072 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Gtf3c3Q3TMP1 882 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Rufy1Q8BIJ7 712 aa17.4■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Kif4P33174 1231 aa17.39■□□□□ 0.38
Col4a1-201ENSMUST00000033898 Ccdc88bQ4QRL3 1481 aa17.39■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Taf3Q5HZG4 932 aa17.39■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Q9D2X8 372 aa17.39■□□□□ 0.37
Col4a1-201ENSMUST00000033898 A0A1L1SQF0 893 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Me1P06801 572 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Gripap1Q8VD04 806 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Pnmal2G3X9N3 661 aa17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Cfdp1O88271 295 aaKnown RBP17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Znhit6Q3UFB2 460 aaKnown RBP17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rbm5Q91YE7 815 aaKnown RBP17.38■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rnf20Q5DTM8 973 aa17.37■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Gpatch3Q8BIY1 525 aa17.37■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Usp47Q8BY87 1376 aa17.37■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Hook1Q8BIL5 728 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Commd10Q8JZY2 202 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Themis2Q91YX0 663 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Kdm4aQ8BW72 1064 aa17.36■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Gcom1E9PZ54 550 aa17.35■□□□□ 0.37
Col4a1-201ENSMUST00000033898 MyzapQ3UIJ9 466 aa17.35■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Babam1Q3UI43 333 aa17.35■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Zpr1Q62384 459 aa17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Pdcl3Q8BVF2 240 aa17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Mphosph10Q810V0 681 aaKnown RBP17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Zrsr2Q62377 462 aaKnown RBP17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Ttll5Q8CHB8 1328 aa17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 HmmrQ00547 794 aaKnown RBP17.34■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rock1P70335 1354 aa17.33■□□□□ 0.37
Col4a1-201ENSMUST00000033898 Rnf214Q8BFU3 668 aaKnown RBP17.33■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Tmc1Q8R4P5 757 aa17.33■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Ccnb3Q810T2 1396 aa17.33■□□□□ 0.36
Col4a1-201ENSMUST00000033898 PhaxQ9JJT9 385 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 NexnQ7TPW1 607 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Stard8Q8K031 1019 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Pank1Q8K4K6 548 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Fam184bQ0KK56 942 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 IkQ9Z1M8 557 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 MycnP03966 462 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Ppp4r3bQ922R5 820 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Dhx57Q6P5D3 1388 aaKnown RBP17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rab11fip3Q8CHD8 1047 aa17.32■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Sf3b2Q3UJB0 878 aaKnown RBP17.31■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Gm10471E9Q1C7 252 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Sirt1Q923E4 737 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Cep89Q9CZX2 791 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Mre11Q61216 706 aa17.3■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rbm28Q8CGC6 750 aaKnown RBP17.29■□□□□ 0.36
Col4a1-201ENSMUST00000033898 KarsQ99MN1 595 aaKnown RBP17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Trim29Q8R2Q0 587 aa17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Erc2Q6PH08 957 aa17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Sv2bQ8BG39 683 aa17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Smg6P61406 1418 aaKnown RBP17.28■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rbm25B2RY56 838 aaKnown RBP17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Nek4Q9Z1J2 792 aa17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Ralbp1Q62172 648 aa17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Glipr1l2Q9CQ35 332 aa17.27■□□□□ 0.36
Col4a1-201ENSMUST00000033898 Rsph4aQ8BYM7 716 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Necab1Q8BG18 352 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Atf3Q60765 181 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 UvssaQ9D479 717 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Shroom4Q1W617 1475 aa17.26■□□□□ 0.35
Col4a1-201ENSMUST00000033898 Cfap99A0A140LIX9 648 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms