RNA–Protein interactions for RNA: ENSMUST00000020350.14

Lgr5-201, Transcript of Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lgr5, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5-201ENSMUST00000020350 Rsph4aQ8BYM7 716 aa14.6□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Cc2d1aQ8K1A6 943 aa14.6□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Phactr2B1AVP0 632 aa14.59□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Ppp2r3aB2RXC8 1150 aa14.59□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Q9D2X8 372 aa14.59□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Ccdc173A0JLY1 547 aa14.58□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Taf3Q5HZG4 932 aa14.58□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Cc2d2bA0A286YDU8 1405 aa14.58□□□□□ -0.07
Lgr5-201ENSMUST00000020350 Rrp9Q91WM3 475 aaKnown RBP14.58□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Dhx29Q6PGC1 1365 aaKnown RBP14.58□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Tnpo1Q8BFY9 898 aaKnown RBP14.58□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Ppp1r18Q8BQ30 594 aa14.57□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Isy1Q69ZQ2 285 aaKnown RBP14.56□□□□□ -0.08
Lgr5-201ENSMUST00000020350 SkilQ60665 675 aa14.56□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Zfp644E9QA22 1323 aa14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Gnai1B2RSH2 354 aa14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Gnai3Q9DC51 354 aa14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Nek4Q9Z1J2 792 aa14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Tpd52l1O54818 204 aa14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Tpm2P58774 284 aa14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Smc3Q9CW03 1217 aaKnown RBP14.55□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Plekhg5Q66T02 1073 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Polr3gQ6NXY9 223 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Ipo4Q8VI75 1082 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Bicd2Q921C5 820 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Phf14Q9D4H9 881 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Ift140E9PY46 1464 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Shroom4Q1W617 1475 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Nsd2Q8BVE8 1365 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Ric3Q8BPM6 367 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Tomm22Q9CPQ3 142 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Mink1Q9JM52 1308 aa14.54□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Ppp2r1aQ76MZ3 589 aa14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Top2aQ01320 1528 aaKnown RBP14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 EzrP26040 586 aaKnown RBP14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 1700010I14RikQ7TPG0 532 aa14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Rbm25B2RY56 838 aaKnown RBP14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Kif3aP28741 701 aa14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Mical1Q8VDP3 1048 aa14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Cabp4Q8VHC5 271 aa14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Swt1Q9DBQ9 907 aa14.53□□□□□ -0.08
Lgr5-201ENSMUST00000020350 IbspQ61711 324 aa14.52□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Shq1Q7TMX5 569 aa14.52□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Rnf214Q8BFU3 668 aaKnown RBP14.52□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Usp16Q99LG0 825 aa14.52□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Hmgn5Q9JL35 406 aa14.52□□□□□ -0.08
Lgr5-201ENSMUST00000020350 ErbinQ80TH2 1402 aa14.52□□□□□ -0.08
Lgr5-201ENSMUST00000020350 Rab3gap2Q8BMG7 1366 aa14.52□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Cplx2P84086 134 aa14.52□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Rnf20Q5DTM8 973 aa14.52□□□□□ -0.09
Lgr5-201ENSMUST00000020350 PogkQ80TC5 607 aa14.52□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Srek1Q8BZX4 494 aaKnown RBP14.52□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Mcm2P97310 904 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Ccdc47Q9D024 483 aaKnown RBP14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Tpm1P58771 284 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Arap1Q4LDD4 1452 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Efcab5A0JP43 1406 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 HdgfP51859 237 aaKnown RBP14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Gtf2a1Q99PM3 378 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Tceal9Q9DD24 104 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Ap3b2Q9JME5 1082 aa14.51□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Nectin2P32507 530 aa14.5□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Kcnh8P59111 1102 aa14.5□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Rab11fip3Q8CHD8 1047 aa14.5□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Ccdc171E9Q1U1 1324 aa14.49□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Dixdc1Q80Y83 711 aa14.49□□□□□ -0.09
Lgr5-201ENSMUST00000020350 ScribQ80U72 1612 aa14.49□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Nutm1Q8BHP2 1126 aa14.48□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Myom3A2ABU4 1439 aa14.48□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Arhgef5E9Q7D5 1581 aa14.48□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Ncoa2Q61026 1462 aa14.48□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Ddx11Q6AXC6 880 aa14.48□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Cchcr1Q8K2I2 770 aa14.47□□□□□ -0.09
Lgr5-201ENSMUST00000020350 NaspQ99MD9 773 aaKnown RBP14.47□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Gm21969J3QJZ1 289 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Jph4Q80WT0 628 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Zkscan1Q8BGS3 561 aaKnown RBP14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Smc4Q8CG47 1286 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Chmp4cQ9D7F7 232 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Gabpb2P81069 414 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Pde4cQ3UEI1 686 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Fez1Q8K0X8 392 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Ccdc34Q3UI66 367 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Evc2Q8K1G2 1220 aa14.46□□□□□ -0.09
Lgr5-201ENSMUST00000020350 Puf60Q3UEB3 564 aaKnown RBP14.46□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Ipo7Q9EPL8 1038 aaKnown RBP14.46□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Cyp46a1Q9WVK8 500 aa14.46□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Sptbn5F6UCX4 1208 aa14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 AppP12023 770 aa14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Hmox1P14901 289 aa14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Drc7Q6V3W6 876 aa14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Nol12Q8BG17 217 aa14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Mad1l1Q9WTX8 717 aaKnown RBP14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Erc2Q6PH08 957 aa14.45□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Cavin4A2AMM0 362 aa14.44□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Samd1D3YXK1 519 aa14.44□□□□□ -0.1
Lgr5-201ENSMUST00000020350 BccipQ9CWI3 316 aa14.44□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Gsto1O09131 240 aa14.44□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Ints3Q7TPD0 1041 aaKnown RBP14.44□□□□□ -0.1
Lgr5-201ENSMUST00000020350 Polr1aO35134 1717 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms