RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Noc3lQ8VI84 807 aaKnown RBP17.28■□□□□ 0.36
Col1a1-201ENSMUST00000001547 AampJ3QN89 436 aa17.27■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Rsph3aQ3UFY4 516 aa17.26■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Ftsj3Q9DBE9 838 aaKnown RBP17.26■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Tpm3P21107 285 aaKnown RBP17.26■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Map7d2A2AG50 781 aa17.26■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Usp16Q99LG0 825 aa17.26■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Fyb1O35601 819 aa17.25■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Ttll5Q8CHB8 1328 aa17.25■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Triml2E9PW10 424 aa17.25■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Isy1Q69ZQ2 285 aaKnown RBP17.25■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Q9D9H8 365 aa17.25■□□□□ 0.35
Col1a1-201ENSMUST00000001547 AppP12023 770 aa17.25■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Becn1O88597 448 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Ddrgk1Q80WW9 315 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Atp2b2Q9R0K7 1198 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Chmp7Q8R1T1 451 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Frmpd1A2AKB4 1549 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Gnai1B2RSH2 354 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Gnai3Q9DC51 354 aa17.24■□□□□ 0.35
Col1a1-201ENSMUST00000001547 FanciQ8K368 1330 aa17.23■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Fgd6Q69ZL1 1399 aa17.23■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Swt1Q9DBQ9 907 aa17.23■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Myom3A2ABU4 1439 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Ccdc141E9Q8Q6 1531 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Smc4Q8CG47 1286 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Tiam1Q60610 1591 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Mrc2Q64449 1479 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 VgfQ0VGU4 617 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Ric3Q8BPM6 367 aa17.22■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Prm3Q62100 101 aa17.21■□□□□ 0.35
Col1a1-201ENSMUST00000001547 PtprkP35822 1457 aa17.21■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Ak7Q9D2H2 614 aa17.21■□□□□ 0.35
Col1a1-201ENSMUST00000001547 Rbm25B2RY56 838 aaKnown RBP17.21■□□□□ 0.35
Col1a1-201ENSMUST00000001547 St18Q80TY4 1045 aa17.2■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Ccer1Q9CQL2 403 aa17.2■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Filip1lQ6P6L0 1131 aa17.2■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Gsdma3Q5Y4Y6 464 aa17.2■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Kif16bB1AVY7 1312 aa17.2■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Q7TT23 1179 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Ccdc47Q9D024 483 aaKnown RBP17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 PnisrA2AJT4 805 aaKnown RBP17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Ppp2r1aQ76MZ3 589 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Pank1Q8K4K6 548 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 BccipQ9CWI3 316 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Tceal9Q9DD24 104 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Cspp1B2RX88 1205 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Mre11Q61216 706 aa17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 EprsQ8CGC7 1512 aaKnown RBP17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Eif2s2Q99L45 331 aaKnown RBP17.19■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Podxl2Q8CAE9 603 aa17.18■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Dhx9O70133 1380 aaKnown RBP17.17■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Casq1O09165 405 aa17.17■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Plekhh1Q80TI1 1356 aa17.17■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Il16O54824 1322 aa17.16■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Nectin2P32507 530 aa17.16■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Fam163aQ8CAA5 168 aa17.16■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Prkrip1Q9CWV6 186 aaKnown RBP17.16■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Rab3gap2Q8BMG7 1366 aa17.16■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Slc4a2P13808 1237 aaKnown RBP17.15■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Rfx1P48377 963 aa17.15■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Arid4aF8VPQ2 1261 aaKnown RBP17.15■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Znf710Q3U288 666 aa17.15■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Atl3Q91YH5 541 aa17.15■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Tpd52l1O54818 204 aa17.15■□□□□ 0.34
Col1a1-201ENSMUST00000001547 Sf3a1Q8K4Z5 791 aaKnown RBP17.14■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Gm14025A2AP89 1413 aa17.14■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Gtf3c3Q3TMP1 882 aa17.13■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Nutm1Q8BHP2 1126 aa17.13■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Nap1l3Q794H2 544 aa17.12■□□□□ 0.33
Col1a1-201ENSMUST00000001547 KinQ8K339 391 aa17.12■□□□□ 0.33
Col1a1-201ENSMUST00000001547 4933402E13RikQ9D4D2 429 aa17.12■□□□□ 0.33
Col1a1-201ENSMUST00000001547 CadpsQ80TJ1 1355 aa17.12■□□□□ 0.33
Col1a1-201ENSMUST00000001547 TatQ8QZR1 454 aa17.12■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Tomm22Q9CPQ3 142 aa17.12■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Rabep1O35551 862 aa17.11■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Sv2bQ8BG39 683 aa17.11■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Ush1cQ9ES64 910 aa17.11■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Ddx11Q6AXC6 880 aa17.11■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Top2bQ64511 1612 aa17.11■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Plb1Q3TTY0 1478 aa17.1■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Fbxo2Q80UW2 297 aa17.1■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Camsap1A2AHC3 1581 aa17.1■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Vps53Q8CCB4 832 aa17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Zfp444Q3TDV8 331 aaKnown RBP17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Q9D2X8 372 aa17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Ubap1lG3UW59 384 aa17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Ccdc171E9Q1U1 1324 aa17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Cetn4Q8K4K1 168 aa17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Gprasp1Q5U4C1 1347 aa17.09■□□□□ 0.33
Col1a1-201ENSMUST00000001547 Cfdp1O88271 295 aaKnown RBP17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 KarsQ99MN1 595 aaKnown RBP17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Cavin4A2AMM0 362 aa17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Plekhg5Q66T02 1073 aa17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Glipr1l2Q9CQ35 332 aa17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Hmox1P14901 289 aa17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Atf3Q60765 181 aa17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Drc7Q6V3W6 876 aa17.08■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Phactr2B1AVP0 632 aa17.07■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Neurod6P48986 337 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms