RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J YOL118CQ08259 102 aa4.53□□□□□ -1.68
HSX1tR(CCU)J MED4Q12343 284 aa4.53□□□□□ -1.68
HSX1tR(CCU)J UBA3Q99344 299 aa4.53□□□□□ -1.68
HSX1tR(CCU)J CKA1P15790 372 aa4.52□□□□□ -1.69
HSX1tR(CCU)J MRP20P32387 263 aa4.52□□□□□ -1.69
HSX1tR(CCU)J CBT1P36038 271 aaPredicted RBP4.52□□□□□ -1.69
HSX1tR(CCU)J RPA34P47006 233 aaPredicted RBP4.52□□□□□ -1.69
HSX1tR(CCU)J YJL118WP47022 219 aa4.52□□□□□ -1.69
HSX1tR(CCU)J BNA1P47096 177 aa4.52□□□□□ -1.69
HSX1tR(CCU)J YGL262WP53054 175 aa4.52□□□□□ -1.69
HSX1tR(CCU)J GPG1P53130 126 aa4.52□□□□□ -1.69
HSX1tR(CCU)J APJ1P53940 528 aa4.52□□□□□ -1.69
HSX1tR(CCU)J NRG1Q03125 231 aa4.52□□□□□ -1.69
HSX1tR(CCU)J DPB4Q04603 196 aaKnown RBP4.52□□□□□ -1.69
HSX1tR(CCU)J RIM9Q04734 239 aa4.52□□□□□ -1.69
HSX1tR(CCU)J YOR292CQ08743 309 aa4.52□□□□□ -1.69
HSX1tR(CCU)J SCP1Q08873 200 aa4.52□□□□□ -1.69
HSX1tR(CCU)J CCW14O13547 238 aa4.51□□□□□ -1.69
HSX1tR(CCU)J RNA14P25298 677 aaKnown RBP4.51□□□□□ -1.69
HSX1tR(CCU)J YCR016WP25617 290 aaKnown RBP4.51□□□□□ -1.69
HSX1tR(CCU)J VMA8P32610 256 aaKnown RBP4.51□□□□□ -1.69
HSX1tR(CCU)J NPL6P32832 435 aa4.51□□□□□ -1.69
HSX1tR(CCU)J REC104P33323 182 aa4.51□□□□□ -1.69
HSX1tR(CCU)J PAN3P36102 679 aaPredicted RBP4.51□□□□□ -1.69
HSX1tR(CCU)J UTP30P36144 274 aaKnown RBP4.51□□□□□ -1.69
HSX1tR(CCU)J POP8P38208 133 aa4.51□□□□□ -1.69
HSX1tR(CCU)J YBR242WP38331 238 aa4.51□□□□□ -1.69
HSX1tR(CCU)J IKI1P38874 309 aa4.51□□□□□ -1.69
HSX1tR(CCU)J YER188WP40103 239 aa4.51□□□□□ -1.69
HSX1tR(CCU)J MSE1P48525 536 aa4.51□□□□□ -1.69
HSX1tR(CCU)J STD1Q02794 444 aa4.51□□□□□ -1.69
HSX1tR(CCU)J VBA1Q04301 562 aa4.51□□□□□ -1.69
HSX1tR(CCU)J YDL086WQ07505 273 aa4.51□□□□□ -1.69
HSX1tR(CCU)J TFC7Q12415 435 aa4.51□□□□□ -1.69
HSX1tR(CCU)J RDI1Q12434 202 aa4.51□□□□□ -1.69
HSX1tR(CCU)J BGL2P15703 313 aaKnown RBP4.5□□□□□ -1.69
HSX1tR(CCU)J DIT1P21623 536 aa4.5□□□□□ -1.69
HSX1tR(CCU)J LSB5P25369 354 aa4.5□□□□□ -1.69
HSX1tR(CCU)J LAG1P38703 411 aa4.5□□□□□ -1.69
HSX1tR(CCU)J PIC2P40035 300 aa4.5□□□□□ -1.69
HSX1tR(CCU)J YGR045CP53229 120 aa4.5□□□□□ -1.69
HSX1tR(CCU)J MIX17Q03667 156 aa4.5□□□□□ -1.69
HSX1tR(CCU)J THI74Q04083 370 aa4.5□□□□□ -1.69
HSX1tR(CCU)J RTT103Q05543 409 aa4.5□□□□□ -1.69
HSX1tR(CCU)J SWT1Q12104 458 aa4.5□□□□□ -1.69
HSX1tR(CCU)J YPR071WQ12346 211 aa4.5□□□□□ -1.69
HSX1tR(CCU)J TRM13Q12383 476 aa4.5□□□□□ -1.69
HSX1tR(CCU)J HUG1Q6Q5K6 68 aa4.5□□□□□ -1.69
HSX1tR(CCU)J RAD52P06778 471 aaKnown RBP4.49□□□□□ -1.69
HSX1tR(CCU)J QCR2P07257 368 aa4.49□□□□□ -1.69
HSX1tR(CCU)J PUT1P09368 476 aa4.49□□□□□ -1.69
HSX1tR(CCU)J SUA7P29055 345 aaPredicted RBP4.49□□□□□ -1.69
HSX1tR(CCU)J PMU1P36069 295 aa4.49□□□□□ -1.69
HSX1tR(CCU)J NIF3P53081 288 aa4.49□□□□□ -1.69
HSX1tR(CCU)J MOT3P54785 490 aaKnown RBP4.49□□□□□ -1.69
HSX1tR(CCU)J CAB5Q03941 241 aa4.49□□□□□ -1.69
HSX1tR(CCU)J YDR415CQ04033 374 aaPredicted RBP4.49□□□□□ -1.69
HSX1tR(CCU)J TSA2Q04120 196 aa4.49□□□□□ -1.69
HSX1tR(CCU)J TMA10Q06177 86 aa4.49□□□□□ -1.69
HSX1tR(CCU)J YPD1Q07688 167 aa4.49□□□□□ -1.69
HSX1tR(CCU)J BOL1Q3E793 110 aa4.49□□□□□ -1.69
HSX1tR(CCU)J DYN1P36022 4092 aa4.48□□□□□ -1.69
HSX1tR(CCU)J ARG80P07249 177 aa4.48□□□□□ -1.69
HSX1tR(CCU)J HEM13P11353 328 aaKnown RBP4.48□□□□□ -1.69
HSX1tR(CCU)J YMR31P19955 123 aa4.48□□□□□ -1.69
HSX1tR(CCU)J MRP17P28778 131 aa4.48□□□□□ -1.69
HSX1tR(CCU)J ERG2P32352 222 aa4.48□□□□□ -1.69
HSX1tR(CCU)J ECM31P38122 312 aa4.48□□□□□ -1.69
HSX1tR(CCU)J YPC1P38298 316 aa4.48□□□□□ -1.69
HSX1tR(CCU)J SSO2P39926 295 aa4.48□□□□□ -1.69
HSX1tR(CCU)J PCL7P40186 285 aa4.48□□□□□ -1.69
HSX1tR(CCU)J RPA14P50106 137 aa4.48□□□□□ -1.69
HSX1tR(CCU)J CWC25P53854 179 aaKnown RBP4.48□□□□□ -1.69
HSX1tR(CCU)J MEH1Q02205 184 aa4.48□□□□□ -1.69
HSX1tR(CCU)J YPL108WQ02872 168 aaPredicted RBP4.48□□□□□ -1.69
HSX1tR(CCU)J HRD1Q08109 551 aa4.48□□□□□ -1.69
HSX1tR(CCU)J YOL029CQ08187 201 aa4.48□□□□□ -1.69
HSX1tR(CCU)J ADE8P04161 214 aa4.47□□□□□ -1.69
HSX1tR(CCU)J ROX3P25046 220 aa4.47□□□□□ -1.69
HSX1tR(CCU)J COQ2P32378 372 aa4.47□□□□□ -1.69
HSX1tR(CCU)J SUA5P32579 426 aa4.47□□□□□ -1.69
HSX1tR(CCU)J CUE1P38428 203 aa4.47□□□□□ -1.69
HSX1tR(CCU)J COS8P38723 381 aa4.47□□□□□ -1.69
HSX1tR(CCU)J AIR1P40507 360 aaKnown RBP4.47□□□□□ -1.69
HSX1tR(CCU)J IRC24P40580 263 aa4.47□□□□□ -1.69
HSX1tR(CCU)J YMR166CQ03829 368 aa4.47□□□□□ -1.69
HSX1tR(CCU)J LPP1Q04396 274 aa4.47□□□□□ -1.69
HSX1tR(CCU)J ATO3Q12359 275 aa4.47□□□□□ -1.69
HSX1tR(CCU)J YOS1Q3E834 85 aa4.47□□□□□ -1.69
HSX1tR(CCU)J VPS63O13549 108 aa4.46□□□□□ -1.7
HSX1tR(CCU)J RPL9AP05738 191 aaKnown RBP4.46□□□□□ -1.7
HSX1tR(CCU)J PHO85P17157 305 aa4.46□□□□□ -1.7
HSX1tR(CCU)J PPQ1P32945 549 aa4.46□□□□□ -1.7
HSX1tR(CCU)J SRY1P36007 326 aa4.46□□□□□ -1.7
HSX1tR(CCU)J BFR1P38934 470 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
HSX1tR(CCU)J NOP16P40007 231 aaKnown RBP4.46□□□□□ -1.7
HSX1tR(CCU)J YJR056CP47115 236 aa4.46□□□□□ -1.7
HSX1tR(CCU)J UBP8P50102 471 aa4.46□□□□□ -1.7
HSX1tR(CCU)J RPL9BP51401 191 aaKnown RBP4.46□□□□□ -1.7
HSX1tR(CCU)J YNL234WP53857 426 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms