RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 SNZ1Q03148 297 aa-3.39□□□□□ -2.95
snR53snR53 YOR186WQ08560 144 aa-3.39□□□□□ -2.95
snR53snR53 TSC3Q3E790 80 aa-3.39□□□□□ -2.95
snR53snR53 YPK2P18961 677 aa-3.4□□□□□ -2.95
snR53snR53 RPL5P26321 297 aaKnown RBP-3.4□□□□□ -2.95
snR53snR53 SMI1P32566 505 aa-3.4□□□□□ -2.95
snR53snR53 YKL070WP36087 169 aa-3.4□□□□□ -2.95
snR53snR53 AGP3P43548 558 aa-3.4□□□□□ -2.95
snR53snR53 HAM1P47119 197 aaKnown RBP-3.4□□□□□ -2.95
snR53snR53 SWP1Q02795 286 aa-3.4□□□□□ -2.95
snR53snR53 FMN1Q03778 218 aa-3.4□□□□□ -2.95
snR53snR53 PRP11Q07350 266 aaPredicted RBP-3.4□□□□□ -2.95
snR53snR53 YAR023CD6VPM8 179 aa-3.41□□□□□ -2.96
snR53snR53 TIM9O74700 87 aa-3.41□□□□□ -2.96
snR53snR53 MEK1P24719 497 aaPredicted RBP-3.41□□□□□ -2.96
snR53snR53 CDC10P25342 322 aaKnown RBP-3.41□□□□□ -2.96
snR53snR53 SWC5P38326 303 aa-3.41□□□□□ -2.96
snR53snR53 URA8P38627 578 aaPredicted RBP-3.41□□□□□ -2.96
snR53snR53 SNZ3P43545 298 aa-3.41□□□□□ -2.96
snR53snR53 SBH2P52871 88 aa-3.41□□□□□ -2.96
snR53snR53 RNR2P09938 399 aaKnown RBP-3.42□□□□□ -2.96
snR53snR53 PAN3P36102 679 aaPredicted RBP-3.42□□□□□ -2.96
snR53snR53 CAF4P36130 643 aa-3.42□□□□□ -2.96
snR53snR53 UBC12P52491 188 aa-3.42□□□□□ -2.96
snR53snR53 NUP84P52891 726 aa-3.42□□□□□ -2.96
snR53snR53 PAA1Q12447 191 aaKnown RBP-3.42□□□□□ -2.96
snR53snR53 CDC31P06704 161 aaKnown RBP-3.43□□□□□ -2.96
snR53snR53 HAP2P06774 265 aa-3.43□□□□□ -2.96
snR53snR53 CAT5P41735 233 aa-3.43□□□□□ -2.96
snR53snR53 YNL010WP53981 241 aaKnown RBP-3.43□□□□□ -2.96
snR53snR53 RRP40Q08285 240 aaKnown RBP-3.43□□□□□ -2.96
snR53snR53 YOR342CQ12182 319 aa-3.43□□□□□ -2.96
snR53snR53 ARO7P32178 256 aa-3.44□□□□□ -2.96
snR53snR53 SGE1P33335 543 aa-3.44□□□□□ -2.96
snR53snR53 SHB17P36136 271 aaKnown RBP-3.44□□□□□ -2.96
snR53snR53 MRPL28P36527 147 aa-3.44□□□□□ -2.96
snR53snR53 ETR1P38071 380 aa-3.44□□□□□ -2.96
snR53snR53 POG1P40473 351 aa-3.44□□□□□ -2.96
snR53snR53 OTU1P43558 301 aa-3.44□□□□□ -2.96
snR53snR53 YKR104WP0CE69 306 aa-3.45□□□□□ -2.96
snR53snR53 RIB7P33312 244 aa-3.45□□□□□ -2.96
snR53snR53 MRPL39P36533 70 aa-3.45□□□□□ -2.96
snR53snR53 THG1P53215 237 aaKnown RBP-3.45□□□□□ -2.96
snR53snR53 YML096WQ04489 525 aa-3.45□□□□□ -2.96
snR53snR53 HRD1Q08109 551 aa-3.45□□□□□ -2.96
snR53snR53 PHO85P17157 305 aa-3.46□□□□□ -2.96
snR53snR53 DBP3P20447 523 aaKnown RBP-3.46□□□□□ -2.96
snR53snR53 SKG1P36169 355 aa-3.46□□□□□ -2.96
snR53snR53 THO1P40040 218 aaKnown RBP-3.46□□□□□ -2.96
snR53snR53 RFC2P40348 353 aa-3.46□□□□□ -2.96
snR53snR53 PRO2P54885 456 aaKnown RBP-3.46□□□□□ -2.96
snR53snR53 ABF2Q02486 183 aa-3.47□□□□□ -2.96
snR53snR53 RNH202Q05635 350 aa-3.47□□□□□ -2.96
snR53snR53 BER1Q06688 274 aaKnown RBP-3.47□□□□□ -2.96
snR53snR53 NBL1Q3E7Y6 73 aa-3.47□□□□□ -2.96
snR53snR53 RIF1P29539 1916 aa-3.48□□□□□ -2.97
snR53snR53 CAR2P07991 424 aaKnown RBP-3.48□□□□□ -2.97
snR53snR53 STE18P18852 110 aa-3.48□□□□□ -2.97
snR53snR53 OPI1P21957 404 aa-3.48□□□□□ -2.97
snR53snR53 ATG22P25568 528 aa-3.48□□□□□ -2.97
snR53snR53 DDI1P40087 428 aa-3.48□□□□□ -2.97
snR53snR53 YNL046WP53956 172 aa-3.48□□□□□ -2.97
snR53snR53 YDR274CP87283 123 aa-3.48□□□□□ -2.97
snR53snR53 ATG17Q06410 417 aa-3.48□□□□□ -2.97
snR53snR53 SME1Q12330 94 aaPredicted RBP-3.48□□□□□ -2.97
snR53snR53 PST2Q12335 198 aaKnown RBP-3.48□□□□□ -2.97
snR53snR53 IDH1P28834 360 aaKnown RBP RIP-Chip data-3.49□□□□□ -2.97not detected
snR53snR53 LAP3Q01532 483 aaKnown RBP RIP-Chip data-3.49□□□□□ -2.97not detected
snR53snR53 PML1Q07930 204 aaPredicted RBP-3.49□□□□□ -2.97
snR53snR53 GET4Q12125 312 aa-3.49□□□□□ -2.97
snR53snR53 PAR32Q12515 295 aaKnown RBP-3.49□□□□□ -2.97
snR53snR53 INH1P01097 85 aa-3.5□□□□□ -2.97
snR53snR53 RPL27AP0C2H6 136 aaKnown RBP-3.5□□□□□ -2.97
snR53snR53 PRE1P22141 198 aaKnown RBP-3.5□□□□□ -2.97
snR53snR53 RPS5P26783 225 aaKnown RBP-3.5□□□□□ -2.97
snR53snR53 HOM6P31116 359 aaKnown RBP-3.5□□□□□ -2.97
snR53snR53 OCH1P31755 480 aa-3.5□□□□□ -2.97
snR53snR53 LIN1P38852 340 aaPredicted RBP-3.5□□□□□ -2.97
snR53snR53 IRC22P40006 225 aa-3.5□□□□□ -2.97
snR53snR53 GLR1P41921 483 aaKnown RBP-3.5□□□□□ -2.97
snR53snR53 PDR17P53844 350 aa-3.5□□□□□ -2.97
snR53snR53 SPC19Q03954 165 aa-3.5□□□□□ -2.97
snR53snR53 CCS1P40202 249 aaKnown RBP-3.51□□□□□ -2.97
snR53snR53 DSN1P40568 576 aa-3.51□□□□□ -2.97
snR53snR53 CDC40P40968 455 aaPredicted RBP-3.51□□□□□ -2.97
snR53snR53 ILM1P47155 203 aa-3.51□□□□□ -2.97
snR53snR53 MPC3P53311 146 aa-3.51□□□□□ -2.97
snR53snR53 SNZ2P53824 298 aa-3.51□□□□□ -2.97
snR53snR53 YMD8Q03697 442 aa-3.51□□□□□ -2.97
snR53snR53 SPG4Q04438 115 aa-3.51□□□□□ -2.97
snR53snR53 DGA1Q08650 418 aa-3.51□□□□□ -2.97
snR53snR53 FRE6Q12473 712 aa-3.51□□□□□ -2.97
snR53snR53 SNF8Q12483 233 aa-3.51□□□□□ -2.97
snR53snR53 URA5P13298 226 aaKnown RBP-3.52□□□□□ -2.97
snR53snR53 BLI1P35727 113 aa-3.52□□□□□ -2.97
snR53snR53 SFK1P35735 353 aa-3.52□□□□□ -2.97
snR53snR53 POP4P38336 279 aa-3.52□□□□□ -2.97
snR53snR53 HSM3P38348 480 aa-3.52□□□□□ -2.97
snR53snR53 GDI1P39958 451 aaKnown RBP-3.52□□□□□ -2.97
snR53snR53 AIM25P47140 327 aa-3.52□□□□□ -2.97
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms