RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 ALB1P47019 175 aaPredicted RBP-0.9□□□□□ -2.55
snR50snR50 ILM1P47155 203 aa-0.9□□□□□ -2.55
snR50snR50 YNL046WP53956 172 aa-0.9□□□□□ -2.55
snR50snR50 RRP40Q08285 240 aaKnown RBP-0.9□□□□□ -2.55
snR50snR50 HFA1P32874 2273 aa-0.91□□□□□ -2.55
snR50snR50 ROM2P51862 1356 aaKnown RBP-0.91□□□□□ -2.55
snR50snR50 KIN28P06242 306 aa-0.91□□□□□ -2.56
snR50snR50 ERD2P18414 219 aa-0.91□□□□□ -2.56
snR50snR50 MSN4P33749 630 aa-0.91□□□□□ -2.56
snR50snR50 MRPL28P36527 147 aa-0.91□□□□□ -2.56
snR50snR50 MRPL39P36533 70 aa-0.91□□□□□ -2.56
snR50snR50 SNZ3P43545 298 aa-0.91□□□□□ -2.56
snR50snR50 EAF6P47128 113 aa-0.91□□□□□ -2.56
snR50snR50 AIM25P47140 327 aa-0.91□□□□□ -2.56
snR50snR50 SNZ1Q03148 297 aa-0.91□□□□□ -2.56
snR50snR50 YMR111CQ04461 462 aaPredicted RBP-0.91□□□□□ -2.56
snR50snR50 YML096WQ04489 525 aa-0.91□□□□□ -2.56
snR50snR50 YLR173WQ06247 608 aa-0.91□□□□□ -2.56
snR50snR50 TIM9O74700 87 aa-0.92□□□□□ -2.56
snR50snR50 COX8P04039 78 aa-0.92□□□□□ -2.56
snR50snR50 CDC37P06101 506 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 RPS22AP0C0W1 130 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 YLR156WP0CE96 114 aa-0.92□□□□□ -2.56
snR50snR50 YLR159WP0CE97 114 aa-0.92□□□□□ -2.56
snR50snR50 YLR161WP0CE98 114 aa-0.92□□□□□ -2.56
snR50snR50 SAR1P20606 190 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 VPS3P23643 1011 aa-0.92□□□□□ -2.56
snR50snR50 CDC10P25342 322 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 POP4P38336 279 aa-0.92□□□□□ -2.56
snR50snR50 URA8P38627 578 aaPredicted RBP-0.92□□□□□ -2.56
snR50snR50 LRP1P38801 184 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 IRC22P40006 225 aa-0.92□□□□□ -2.56
snR50snR50 CAT5P41735 233 aa-0.92□□□□□ -2.56
snR50snR50 GCD14P46959 383 aaPredicted RBP-0.92□□□□□ -2.56
snR50snR50 PRO2P54885 456 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.92□□□□□ -2.56not detected
snR50snR50 MGR2Q02889 113 aa-0.92□□□□□ -2.56
snR50snR50 YML108WQ03759 105 aa-0.92□□□□□ -2.56
snR50snR50 SPG4Q04438 115 aa-0.92□□□□□ -2.56
snR50snR50 YMR321CQ04898 105 aa-0.92□□□□□ -2.56
snR50snR50 YLR413WQ06689 675 aa-0.92□□□□□ -2.56
snR50snR50 PRP11Q07350 266 aaPredicted RBP-0.92□□□□□ -2.56
snR50snR50 YOR072WQ08486 104 aa-0.92□□□□□ -2.56
snR50snR50 YOR034C-AQ3E735 80 aa-0.92□□□□□ -2.56
snR50snR50 RPS22BQ3E7Y3 130 aaKnown RBP-0.92□□□□□ -2.56
snR50snR50 YAR023CD6VPM8 179 aa-0.93□□□□□ -2.56
snR50snR50 FRS2P15625 503 aaKnown RBP-0.93□□□□□ -2.56
snR50snR50 ATG22P25568 528 aa-0.93□□□□□ -2.56
snR50snR50 RPS5P26783 225 aaKnown RBP-0.93□□□□□ -2.56
snR50snR50 MGM101P32787 269 aaKnown RBP-0.93□□□□□ -2.56
snR50snR50 RPC25P35718 212 aa-0.93□□□□□ -2.56
snR50snR50 PAN3P36102 679 aaPredicted RBP-0.93□□□□□ -2.56
snR50snR50 AIM20P40451 204 aa-0.93□□□□□ -2.56
snR50snR50 NUP84P52891 726 aa-0.93□□□□□ -2.56
snR50snR50 THG1P53215 237 aaKnown RBP-0.93□□□□□ -2.56
snR50snR50 BCP1Q06338 283 aa-0.93□□□□□ -2.56
snR50snR50 CUR1Q06469 252 aa-0.93□□□□□ -2.56
snR50snR50 YPR170W-BP0C5R9 85 aa-0.94□□□□□ -2.56
snR50snR50 PHO85P17157 305 aa-0.94□□□□□ -2.56
snR50snR50 GPI12P23797 304 aa-0.94□□□□□ -2.56
snR50snR50 HOM6P31116 359 aaKnown RBP-0.94□□□□□ -2.56
snR50snR50 ASF2P32448 525 aaPredicted RBP-0.94□□□□□ -2.56
snR50snR50 UBC6P33296 250 aaPredicted RBP-0.94□□□□□ -2.56
snR50snR50 SHB17P36136 271 aaKnown RBP-0.94□□□□□ -2.56
snR50snR50 PAM17P36147 197 aa-0.94□□□□□ -2.56
snR50snR50 RIB1P38066 345 aa-0.94□□□□□ -2.56
snR50snR50 ETR1P38071 380 aa-0.94□□□□□ -2.56
snR50snR50 GOS1P38736 223 aa-0.94□□□□□ -2.56
snR50snR50 YJR012CP47087 207 aa-0.94□□□□□ -2.56
snR50snR50 RIB4P50861 169 aaPredicted RBP-0.94□□□□□ -2.56
snR50snR50 YGL230CP53074 147 aa-0.94□□□□□ -2.56
snR50snR50 VOA1P53262 265 aa-0.94□□□□□ -2.56
snR50snR50 LSB1P53281 241 aa-0.94□□□□□ -2.56
snR50snR50 PDR16P53860 351 aaKnown RBP-0.94□□□□□ -2.56
snR50snR50 YMD8Q03697 442 aa-0.94□□□□□ -2.56
snR50snR50 VAC14Q06708 880 aa-0.94□□□□□ -2.56
snR50snR50 PML1Q07930 204 aaPredicted RBP-0.94□□□□□ -2.56
snR50snR50 GRE1Q08969 168 aa-0.94□□□□□ -2.56
snR50snR50 YOR342CQ12182 319 aa-0.94□□□□□ -2.56
snR50snR50 RPL27AP0C2H6 136 aaKnown RBP-0.95□□□□□ -2.56
snR50snR50 URA5P13298 226 aaKnown RBP-0.95□□□□□ -2.56
snR50snR50 PPA2P28239 310 aa-0.95□□□□□ -2.56
snR50snR50 ARO7P32178 256 aa-0.95□□□□□ -2.56
snR50snR50 APS1P35181 156 aa-0.95□□□□□ -2.56
snR50snR50 SFK1P35735 353 aa-0.95□□□□□ -2.56
snR50snR50 END3P39013 349 aa-0.95□□□□□ -2.56
snR50snR50 DDI1P40087 428 aa-0.95□□□□□ -2.56
snR50snR50 NOP19P53317 196 aaPredicted RBP-0.95□□□□□ -2.56
snR50snR50 SNZ2P53824 298 aa-0.95□□□□□ -2.56
snR50snR50 FMN1Q03778 218 aa-0.95□□□□□ -2.56
snR50snR50 LPP1Q04396 274 aa-0.95□□□□□ -2.56
snR50snR50 RNH202Q05635 350 aa-0.95□□□□□ -2.56
snR50snR50 RRG8Q06109 277 aa-0.95□□□□□ -2.56
snR50snR50 GET4Q12125 312 aa-0.95□□□□□ -2.56
snR50snR50 LSO2Q3E772 92 aaKnown RBP-0.95□□□□□ -2.56
snR50snR50 YPL229WQ99395 206 aa-0.95□□□□□ -2.56
snR50snR50 SPT7P35177 1332 aa-0.95□□□□□ -2.56
snR50snR50 BLM10P43583 2143 aa-0.95□□□□□ -2.56
snR50snR50 HAP2P06774 265 aa-0.96□□□□□ -2.56
snR50snR50 IDH1P28834 360 aaKnown RBP RIP-Chip data-0.96□□□□□ -2.56not detected
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms