RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W YER084WP40057 128 aa2.69□□□□□ -1.98
HSH49YOR319W AIM25P47140 327 aa2.69□□□□□ -1.98
HSH49YOR319W SSU72P53538 206 aaPredicted RBP2.69□□□□□ -1.98
HSH49YOR319W YDL012CQ12489 107 aa2.69□□□□□ -1.98
HSH49YOR319W TDA8Q6B2U8 126 aa2.69□□□□□ -1.98
HSH49YOR319W DPM1P14020 267 aaKnown RBP2.68□□□□□ -1.98
HSH49YOR319W PIR5P46999 287 aa2.68□□□□□ -1.98
HSH49YOR319W COG5P53951 403 aa2.68□□□□□ -1.98
HSH49YOR319W FUS2Q05670 677 aa2.68□□□□□ -1.98
HSH49YOR319W SMD2Q06217 110 aaKnown RBP2.68□□□□□ -1.98
HSH49YOR319W GGA1Q06336 557 aa2.68□□□□□ -1.98
HSH49YOR319W AKR2Q12013 749 aa2.68□□□□□ -1.98
HSH49YOR319W YHR214C-EQ8TGK0 99 aa2.68□□□□□ -1.98
HSH49YOR319W IKI3Q06706 1349 aaKnown RBP2.68□□□□□ -1.98
HSH49YOR319W RPL9AP05738 191 aaKnown RBP2.67□□□□□ -1.98
HSH49YOR319W KRE1P17260 313 aa2.67□□□□□ -1.98
HSH49YOR319W TRR1P29509 319 aaKnown RBP2.67□□□□□ -1.98
HSH49YOR319W AST2P39945 430 aaKnown RBP2.67□□□□□ -1.98
HSH49YOR319W SPO73P40031 143 aa2.67□□□□□ -1.98
HSH49YOR319W RPL9BP51401 191 aaKnown RBP2.67□□□□□ -1.98
HSH49YOR319W YGL088WP53151 121 aa2.67□□□□□ -1.98
HSH49YOR319W CAB4P53332 305 aa2.67□□□□□ -1.98
HSH49YOR319W NRK1P53915 240 aa2.67□□□□□ -1.98
HSH49YOR319W GAS3Q03655 524 aa2.67□□□□□ -1.98
HSH49YOR319W NOC4Q06512 552 aaPredicted RBP2.67□□□□□ -1.98
HSH49YOR319W GRE1Q08969 168 aa2.67□□□□□ -1.98
HSH49YOR319W PSF1Q12488 208 aa2.67□□□□□ -1.98
HSH49YOR319W YIL177CP40434 1758 aa2.66□□□□□ -1.98
HSH49YOR319W YJL225CP40889 1758 aa2.66□□□□□ -1.98
HSH49YOR319W SIR2P06700 562 aa2.66□□□□□ -1.98
HSH49YOR319W PUT1P09368 476 aa2.66□□□□□ -1.98
HSH49YOR319W GCY1P14065 312 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
HSH49YOR319W GRX2P17695 143 aaKnown RBP2.66□□□□□ -1.98
HSH49YOR319W SKG1P36169 355 aa2.66□□□□□ -1.98
HSH49YOR319W PDS1P40316 373 aaPredicted RBP2.66□□□□□ -1.98
HSH49YOR319W SMD3P43321 101 aaKnown RBP2.66□□□□□ -1.98
HSH49YOR319W SNO1Q03144 224 aa2.66□□□□□ -1.98
HSH49YOR319W ARO80Q04052 950 aa2.66□□□□□ -1.98
HSH49YOR319W YLR036CQ07986 203 aa2.66□□□□□ -1.98
HSH49YOR319W YPL162CQ12042 273 aa2.66□□□□□ -1.98
HSH49YOR319W IGO2Q9P305 131 aa2.66□□□□□ -1.98
HSH49YOR319W CDC8P00572 216 aa2.65□□□□□ -1.99
HSH49YOR319W REP2P03872 296 aa2.65□□□□□ -1.99
HSH49YOR319W RPL26AP05743 127 aaKnown RBP2.65□□□□□ -1.99
HSH49YOR319W YHR032W-AP0C5N6 59 aa2.65□□□□□ -1.99
HSH49YOR319W MIG1P27705 504 aa2.65□□□□□ -1.99
HSH49YOR319W RME1P32338 300 aaKnown RBP2.65□□□□□ -1.99
HSH49YOR319W SEC17P32602 292 aa2.65□□□□□ -1.99
HSH49YOR319W YHL026CP38740 315 aa2.65□□□□□ -1.99
HSH49YOR319W CTR2P38865 189 aa2.65□□□□□ -1.99
HSH49YOR319W RPL26BP53221 127 aaKnown RBP2.65□□□□□ -1.99
HSH49YOR319W YIP3P53633 176 aa2.65□□□□□ -1.99
HSH49YOR319W YNL184CP53876 108 aa2.65□□□□□ -1.99
HSH49YOR319W PRM15Q03262 622 aa2.65□□□□□ -1.99
HSH49YOR319W YOL024WQ08172 172 aa2.65□□□□□ -1.99
HSH49YOR319W YOL160WQ08321 113 aa2.65□□□□□ -1.99
HSH49YOR319W PRM7Q12459 698 aa2.65□□□□□ -1.99
HSH49YOR319W YDL085C-AQ3E7B7 68 aaKnown RBP2.65□□□□□ -1.99
HSH49YOR319W YLR156WP0CE96 114 aa2.64□□□□□ -1.99
HSH49YOR319W YLR159WP0CE97 114 aa2.64□□□□□ -1.99
HSH49YOR319W YLR161WP0CE98 114 aa2.64□□□□□ -1.99
HSH49YOR319W TAH1P25638 111 aaPredicted RBP2.64□□□□□ -1.99
HSH49YOR319W SCM4P32564 187 aa2.64□□□□□ -1.99
HSH49YOR319W VMA11P32842 164 aa2.64□□□□□ -1.99
HSH49YOR319W UTP30P36144 274 aaKnown RBP2.64□□□□□ -1.99
HSH49YOR319W MED6P38782 295 aa2.64□□□□□ -1.99
HSH49YOR319W SRP14P38985 146 aa2.64□□□□□ -1.99
HSH49YOR319W UBC12P52491 188 aa2.64□□□□□ -1.99
HSH49YOR319W YLR460CP54007 376 aa2.64□□□□□ -1.99
HSH49YOR319W YDR249CQ03787 373 aa2.64□□□□□ -1.99
HSH49YOR319W TRM12Q04235 462 aa2.64□□□□□ -1.99
HSH49YOR319W GRX8Q05926 109 aa2.64□□□□□ -1.99
HSH49YOR319W MSW1P04803 379 aa2.63□□□□□ -1.99
HSH49YOR319W SNF4P12904 322 aa2.63□□□□□ -1.99
HSH49YOR319W CNB1P25296 175 aa2.63□□□□□ -1.99
HSH49YOR319W GLE2P40066 365 aa2.63□□□□□ -1.99
HSH49YOR319W MRPL49P40858 161 aaPredicted RBP2.63□□□□□ -1.99
HSH49YOR319W MCP1Q12106 302 aa2.63□□□□□ -1.99
HSH49YOR319W MBF1O14467 151 aaKnown RBP2.62□□□□□ -1.99
HSH49YOR319W URA5P13298 226 aaKnown RBP2.62□□□□□ -1.99
HSH49YOR319W BET1P22804 142 aa2.62□□□□□ -1.99
HSH49YOR319W SCO1P23833 295 aa2.62□□□□□ -1.99
HSH49YOR319W SDH4P37298 181 aa2.62□□□□□ -1.99
HSH49YOR319W MAK5P38112 773 aaPredicted RBP2.62□□□□□ -1.99
HSH49YOR319W YJL144WP47009 104 aa2.62□□□□□ -1.99
HSH49YOR319W SNX4P47057 423 aa2.62□□□□□ -1.99
HSH49YOR319W JAC1P53193 184 aa2.62□□□□□ -1.99
HSH49YOR319W SWP1Q02795 286 aa2.62□□□□□ -1.99
HSH49YOR319W RIO1Q12196 484 aaKnown RBP2.62□□□□□ -1.99
HSH49YOR319W TSC3Q3E790 80 aa2.62□□□□□ -1.99
HSH49YOR319W YPR096CO13587 100 aa2.61□□□□□ -1.99
HSH49YOR319W RPB3P16370 318 aaKnown RBP2.61□□□□□ -1.99
HSH49YOR319W TRX3P25372 127 aa2.61□□□□□ -1.99
HSH49YOR319W MGT1P26188 188 aa2.61□□□□□ -1.99
HSH49YOR319W FES1P38260 290 aa2.61□□□□□ -1.99
HSH49YOR319W MNN5P46982 586 aa2.61□□□□□ -1.99
HSH49YOR319W AIF1P52923 378 aa2.61□□□□□ -1.99
HSH49YOR319W EFM5P53200 248 aaKnown RBP2.61□□□□□ -1.99
HSH49YOR319W YNL247WP53852 767 aaKnown RBP2.61□□□□□ -1.99
HSH49YOR319W YNL140CP53910 189 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms