RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C ASM4Q05166 528 aa3.65□□□□□ -1.83
VHS3YOR054C GRX8Q05926 109 aa3.65□□□□□ -1.83
VHS3YOR054C SEI1Q06058 285 aa3.65□□□□□ -1.83
VHS3YOR054C YOR338WQ99326 363 aa3.65□□□□□ -1.83
VHS3YOR054C POR1P04840 283 aaKnown RBP3.64□□□□□ -1.83
VHS3YOR054C CDC21P06785 304 aa3.64□□□□□ -1.83
VHS3YOR054C COX9P07255 59 aa3.64□□□□□ -1.83
VHS3YOR054C EMP70P32802 667 aa3.64□□□□□ -1.83
VHS3YOR054C SLC1P33333 303 aa3.64□□□□□ -1.83
VHS3YOR054C YKL187CP34231 750 aa3.64□□□□□ -1.83
VHS3YOR054C RPL14AP36105 138 aaKnown RBP3.64□□□□□ -1.83
VHS3YOR054C RPL14BP38754 138 aaKnown RBP3.64□□□□□ -1.83
VHS3YOR054C YPT35P38815 214 aaKnown RBP3.64□□□□□ -1.83
VHS3YOR054C YEA6P39953 335 aa3.64□□□□□ -1.83
VHS3YOR054C SCS3P53012 380 aa3.64□□□□□ -1.83
VHS3YOR054C RPN14P53196 417 aa3.64□□□□□ -1.83
VHS3YOR054C BIO5P53744 561 aaKnown RBP3.64□□□□□ -1.83
VHS3YOR054C YNR061CP53747 219 aa3.64□□□□□ -1.83
VHS3YOR054C ELC1Q03071 99 aa3.64□□□□□ -1.83
VHS3YOR054C ECM22Q05958 814 aaPredicted RBP3.64□□□□□ -1.83
VHS3YOR054C YLR050CQ12155 161 aaKnown RBP3.64□□□□□ -1.83
VHS3YOR054C RKI1Q12189 258 aa3.64□□□□□ -1.83
VHS3YOR054C FRE8Q12209 686 aa3.64□□□□□ -1.83
VHS3YOR054C SUL2Q12325 893 aa3.64□□□□□ -1.83
VHS3YOR054C YCR075W-AQ3E830 75 aa3.64□□□□□ -1.83
VHS3YOR054C MKK1P32490 508 aa3.63□□□□□ -1.83
VHS3YOR054C ARC40P38328 384 aaKnown RBP3.63□□□□□ -1.83
VHS3YOR054C TVP23P38962 199 aa3.63□□□□□ -1.83
VHS3YOR054C PAC2P39937 518 aa3.63□□□□□ -1.83
VHS3YOR054C RPL13BP40212 199 aaKnown RBP3.63□□□□□ -1.83
VHS3YOR054C YJL163CP46996 555 aa3.63□□□□□ -1.83
VHS3YOR054C JJJ3P47138 172 aa3.63□□□□□ -1.83
VHS3YOR054C MSY1P48527 492 aa3.63□□□□□ -1.83
VHS3YOR054C YGR015CP53208 328 aa3.63□□□□□ -1.83
VHS3YOR054C RNH201P53942 307 aa3.63□□□□□ -1.83
VHS3YOR054C SMX3P54999 86 aaPredicted RBP3.63□□□□□ -1.83
VHS3YOR054C SCW10Q04951 389 aa3.63□□□□□ -1.83
VHS3YOR054C LOA1Q06508 300 aa3.63□□□□□ -1.83
VHS3YOR054C POS5Q06892 414 aa3.63□□□□□ -1.83
VHS3YOR054C ODC2Q99297 307 aa3.63□□□□□ -1.83
VHS3YOR054C CDC36P06100 191 aaPredicted RBP3.63□□□□□ -1.83
VHS3YOR054C SPT15P13393 240 aaKnown RBP3.63□□□□□ -1.83
VHS3YOR054C NFS1P25374 497 aa3.63□□□□□ -1.83
VHS3YOR054C IMG2P25642 146 aaPredicted RBP3.63□□□□□ -1.83
VHS3YOR054C IDH2P28241 369 aaKnown RBP3.63□□□□□ -1.83
VHS3YOR054C MTR2P34232 184 aaKnown RBP3.63□□□□□ -1.83
VHS3YOR054C YKL102CP34249 101 aa3.63□□□□□ -1.83
VHS3YOR054C YUH1P35127 236 aa3.63□□□□□ -1.83
VHS3YOR054C DRE2P36152 348 aa3.63□□□□□ -1.83
VHS3YOR054C SLM6P38343 150 aa3.63□□□□□ -1.83
VHS3YOR054C YHL041WP38730 149 aa3.63□□□□□ -1.83
VHS3YOR054C HSP10P38910 106 aa3.63□□□□□ -1.83
VHS3YOR054C YEA4P40004 342 aa3.63□□□□□ -1.83
VHS3YOR054C SPG5P42933 373 aa3.63□□□□□ -1.83
VHS3YOR054C BAT2P47176 376 aaKnown RBP3.63□□□□□ -1.83
VHS3YOR054C YIP4P53093 235 aa3.63□□□□□ -1.83
VHS3YOR054C YNL260CP53846 198 aa3.63□□□□□ -1.83
VHS3YOR054C DYN2Q02647 92 aa3.63□□□□□ -1.83
VHS3YOR054C MRX8Q05473 314 aa3.63□□□□□ -1.83
VHS3YOR054C TAZ1Q06510 381 aa3.63□□□□□ -1.83
VHS3YOR054C YPR071WQ12346 211 aa3.63□□□□□ -1.83
VHS3YOR054C YOL162WP0CF19 215 aa3.62□□□□□ -1.83
VHS3YOR054C CUP1-1P0CX80 61 aa3.62□□□□□ -1.83
VHS3YOR054C CUP1-2P0CX81 61 aa3.62□□□□□ -1.83
VHS3YOR054C RPL35AP0CX84 120 aaKnown RBP3.62□□□□□ -1.83
VHS3YOR054C RPL35BP0CX85 120 aaKnown RBP3.62□□□□□ -1.83
VHS3YOR054C MIH1P23748 554 aa3.62□□□□□ -1.83
VHS3YOR054C TRR1P29509 319 aaKnown RBP3.62□□□□□ -1.83
VHS3YOR054C OCH1P31755 480 aa3.62□□□□□ -1.83
VHS3YOR054C SSH4P32343 579 aa3.62□□□□□ -1.83
VHS3YOR054C MDL1P33310 695 aa3.62□□□□□ -1.83
VHS3YOR054C YOX1P34161 385 aa3.62□□□□□ -1.83
VHS3YOR054C PAU16P35994 123 aa3.62□□□□□ -1.83
VHS3YOR054C UMP1P38293 148 aa3.62□□□□□ -1.83
VHS3YOR054C EMC4P53073 190 aa3.62□□□□□ -1.83
VHS3YOR054C LCL3P53153 274 aa3.62□□□□□ -1.83
VHS3YOR054C MTM1P53320 366 aa3.62□□□□□ -1.83
VHS3YOR054C BOR1P53838 576 aa3.62□□□□□ -1.83
VHS3YOR054C CTF19Q02732 369 aa3.62□□□□□ -1.83
VHS3YOR054C NRG1Q03125 231 aa3.62□□□□□ -1.83
VHS3YOR054C CAB5Q03941 241 aa3.62□□□□□ -1.83
VHS3YOR054C FSH2Q05015 223 aa3.62□□□□□ -1.83
VHS3YOR054C YOL024WQ08172 172 aa3.62□□□□□ -1.83
VHS3YOR054C YDR262WQ12331 272 aa3.62□□□□□ -1.83
VHS3YOR054C QCR2P07257 368 aa3.61□□□□□ -1.83
VHS3YOR054C CHO1P08456 276 aa3.61□□□□□ -1.83
VHS3YOR054C OLE1P21147 510 aaKnown RBP3.61□□□□□ -1.83
VHS3YOR054C YCR100CP25606 316 aa3.61□□□□□ -1.83
VHS3YOR054C MRP49P32388 137 aa3.61□□□□□ -1.83
VHS3YOR054C MNS1P32906 549 aa3.61□□□□□ -1.83
VHS3YOR054C GEX2P36173 615 aa3.61□□□□□ -1.83
VHS3YOR054C YBR292CP38357 123 aa3.61□□□□□ -1.83
VHS3YOR054C YER134CP40081 178 aa3.61□□□□□ -1.83
VHS3YOR054C GTS1P40956 396 aa3.61□□□□□ -1.83
VHS3YOR054C YJR015WP47090 510 aa3.61□□□□□ -1.83
VHS3YOR054C TTI2P47168 421 aa3.61□□□□□ -1.83
VHS3YOR054C HNT2P49775 206 aa3.61□□□□□ -1.83
VHS3YOR054C ERG25P53045 309 aa3.61□□□□□ -1.83
VHS3YOR054C COX18P53239 316 aa3.61□□□□□ -1.83
VHS3YOR054C CSL4P53859 292 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms