RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	MRPL22	P53881	309 aa		7.85	□□□□□ -1.15
MSB4	YOL112W	RPL15B	P54780	204 aa	Predicted RBP	7.85	□□□□□ -1.15
MSB4	YOL112W	DPB4	Q04603	196 aa	Known RBP	7.85	□□□□□ -1.15
MSB4	YOL112W	RDI1	Q12434	202 aa		7.85	□□□□□ -1.15
MSB4	YOL112W	CKA1	P15790	372 aa		7.84	□□□□□ -1.15
MSB4	YOL112W	MIR1	P23641	311 aa	Known RBP	7.84	□□□□□ -1.15
MSB4	YOL112W	CPR4	P25334	318 aa		7.84	□□□□□ -1.15
MSB4	YOL112W	TRR1	P29509	319 aa	Known RBP	7.84	□□□□□ -1.15
MSB4	YOL112W	REC104	P33323	182 aa		7.84	□□□□□ -1.15
MSB4	YOL112W	MSE1	P48525	536 aa		7.84	□□□□□ -1.15
MSB4	YOL112W	ASM4	Q05166	528 aa		7.84	□□□□□ -1.15
MSB4	YOL112W	YOR292C	Q08743	309 aa		7.84	□□□□□ -1.15
MSB4	YOL112W	GAR1	P28007	205 aa	Known RBP	7.83	□□□□□ -1.16
MSB4	YOL112W	TCA17	P32613	152 aa		7.83	□□□□□ -1.16
MSB4	YOL112W	BMT5	P40493	336 aa		7.83	□□□□□ -1.16
MSB4	YOL112W	LSM1	P47017	172 aa	Known RBP	7.83	□□□□□ -1.16
MSB4	YOL112W	GTF1	P53260	183 aa	Predicted RBP	7.83	□□□□□ -1.16
MSB4	YOL112W	ADH6	Q04894	360 aa	Known RBP	7.83	□□□□□ -1.16
MSB4	YOL112W	TMA10	Q06177	86 aa		7.83	□□□□□ -1.16
MSB4	YOL112W	ARR2	Q06597	130 aa		7.83	□□□□□ -1.16
MSB4	YOL112W	DGK1	Q12382	290 aa		7.83	□□□□□ -1.16
MSB4	YOL112W	HUG1	Q6Q5K6	68 aa		7.83	□□□□□ -1.16
MSB4	YOL112W	YUH1	P35127	236 aa		7.82	□□□□□ -1.16
MSB4	YOL112W	YBR242W	P38331	238 aa		7.82	□□□□□ -1.16
MSB4	YOL112W	POP2	P39008	433 aa		7.82	□□□□□ -1.16
MSB4	YOL112W	YER188W	P40103	239 aa		7.82	□□□□□ -1.16
MSB4	YOL112W	PCL7	P40186	285 aa		7.82	□□□□□ -1.16
MSB4	YOL112W	MOT3	P54785	490 aa	Known RBP	7.82	□□□□□ -1.16
MSB4	YOL112W	SCP1	Q08873	200 aa		7.82	□□□□□ -1.16
MSB4	YOL112W	NHP6B	P11633	99 aa	Known RBP	7.81	□□□□□ -1.16
MSB4	YOL112W	MRPL3	P36516	390 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	COS8	P38723	381 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	PIC2	P40035	300 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	YGR045C	P53229	120 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	RAD52	P06778	471 aa	Known RBP	7.81	□□□□□ -1.16
MSB4	YOL112W	MRP20	P32387	263 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	CBT1	P36038	271 aa	Predicted RBP	7.81	□□□□□ -1.16
MSB4	YOL112W	UTP30	P36144	274 aa	Known RBP	7.81	□□□□□ -1.16
MSB4	YOL112W	IKI1	P38874	309 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	AIR1	P40507	360 aa	Known RBP	7.81	□□□□□ -1.16
MSB4	YOL112W	RPA34	P47006	233 aa	Predicted RBP	7.81	□□□□□ -1.16
MSB4	YOL112W	THI74	Q04083	370 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	VBA1	Q04301	562 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	RTT103	Q05543	409 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	FEX2	Q08991	375 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	YPR071W	Q12346	211 aa		7.81	□□□□□ -1.16
MSB4	YOL112W	DYN1	P36022	4092 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	UBP8	P50102	471 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	GPG1	P53130	126 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	YNL234W	P53857	426 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	MIX17	Q03667	156 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	CAB5	Q03941	241 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	ATO3	Q12359	275 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	YOS1	Q3E834	85 aa		7.8	□□□□□ -1.16
MSB4	YOL112W	LSB5	P25369	354 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	YCR016W	P25617	290 aa	Known RBP	7.79	□□□□□ -1.16
MSB4	YOL112W	PMU1	P36069	295 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	YJL118W	P47022	219 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	RPA14	P50106	137 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	SMX3	P54999	86 aa	Predicted RBP	7.79	□□□□□ -1.16
MSB4	YOL112W	MRPS16	Q02608	121 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	YMR166C	Q03829	368 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	HOF1	Q05080	669 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	YPD1	Q07688	167 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	FCY1	Q12178	158 aa		7.79	□□□□□ -1.16
MSB4	YOL112W	YJR056C	P47115	236 aa		7.78	□□□□□ -1.16
MSB4	YOL112W	DUG3	P53871	357 aa		7.78	□□□□□ -1.16
MSB4	YOL112W	YDL086W	Q07505	273 aa		7.78	□□□□□ -1.16
MSB4	YOL112W	YFH1	Q07540	174 aa		7.78	□□□□□ -1.16
MSB4	YOL112W	TRM13	Q12383	476 aa		7.78	□□□□□ -1.16
MSB4	YOL112W	MRP17	P28778	131 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	ERG2	P32352	222 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	SPS18	P32572	300 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	VMA8	P32610	256 aa	Known RBP	7.77	□□□□□ -1.17
MSB4	YOL112W	NIF3	P53081	288 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	MRPL13	Q02204	264 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	MEH1	Q02205	184 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	STD1	Q02794	444 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	LPP1	Q04396	274 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	FEX1	Q08913	375 aa		7.77	□□□□□ -1.17
MSB4	YOL112W	ADE8	P04161	214 aa		7.76	□□□□□ -1.17
MSB4	YOL112W	ROX3	P25046	220 aa		7.76	□□□□□ -1.17
MSB4	YOL112W	MSA1	Q08471	629 aa		7.76	□□□□□ -1.17
MSB4	YOL112W	QCR2	P07257	368 aa		7.75	□□□□□ -1.17
MSB4	YOL112W	BGL2	P15703	313 aa	Known RBP	7.75	□□□□□ -1.17
MSB4	YOL112W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.75	□□□□□ -1.17	not detected
MSB4	YOL112W	YGR151C	P53287	111 aa		7.75	□□□□□ -1.17
MSB4	YOL112W	YPL108W	Q02872	168 aa	Predicted RBP	7.75	□□□□□ -1.17
MSB4	YOL112W	BOL1	Q3E793	110 aa		7.75	□□□□□ -1.17
MSB4	YOL112W	TPI1	P00942	248 aa	Known RBP	7.75	□□□□□ -1.17
MSB4	YOL112W	OLE1	P21147	510 aa	Known RBP	7.75	□□□□□ -1.17
MSB4	YOL112W	IRC24	P40580	263 aa		7.75	□□□□□ -1.17
MSB4	YOL112W	BNA1	P47096	177 aa		7.75	□□□□□ -1.17
MSB4	YOL112W	SRL1	Q08673	210 aa		7.75	□□□□□ -1.17
MSB4	YOL112W	RPL9A	P05738	191 aa	Known RBP	7.74	□□□□□ -1.17
MSB4	YOL112W	LAG1	P38703	411 aa		7.74	□□□□□ -1.17
MSB4	YOL112W	YGR210C	P42942	411 aa		7.74	□□□□□ -1.17
MSB4	YOL112W	DAL4	Q04895	635 aa		7.74	□□□□□ -1.17
MSB4	YOL112W	AEP3	Q12089	606 aa		7.74	□□□□□ -1.17
MSB4	YOL112W	ARG80	P07249	177 aa		7.73	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms