RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W UBC12P52491 188 aa5.04□□□□□ -1.6
ATG4YNL223W PNC1P53184 216 aaKnown RBP5.04□□□□□ -1.6
ATG4YNL223W MRPL22P53881 309 aa5.04□□□□□ -1.6
ATG4YNL223W ACT1P60010 375 aaKnown RBP5.04□□□□□ -1.6
ATG4YNL223W VPS28Q02767 242 aa5.04□□□□□ -1.6
ATG4YNL223W RRT7Q07829 113 aa5.04□□□□□ -1.6
ATG4YNL223W GAT3Q07928 141 aa5.04□□□□□ -1.6
ATG4YNL223W YOL118CQ08259 102 aa5.04□□□□□ -1.6
ATG4YNL223W ATP14Q12349 124 aa5.04□□□□□ -1.6
ATG4YNL223W YOR192C-CQ3E736 78 aa5.04□□□□□ -1.6
ATG4YNL223W ISN1Q99312 450 aa5.04□□□□□ -1.6
ATG4YNL223W ERG2P32352 222 aa5.03□□□□□ -1.6
ATG4YNL223W YUH1P35127 236 aa5.03□□□□□ -1.6
ATG4YNL223W YBR220CP38318 560 aa5.03□□□□□ -1.6
ATG4YNL223W GCV3P39726 170 aaPredicted RBP5.03□□□□□ -1.6
ATG4YNL223W PAC2P39937 518 aa5.03□□□□□ -1.6
ATG4YNL223W YGL117WP53133 265 aa5.03□□□□□ -1.6
ATG4YNL223W MEH1Q02205 184 aa5.03□□□□□ -1.6
ATG4YNL223W EST3Q03096 181 aa5.03□□□□□ -1.6
ATG4YNL223W YMR279CQ03263 540 aa5.03□□□□□ -1.6
ATG4YNL223W TSA2Q04120 196 aa5.03□□□□□ -1.6
ATG4YNL223W FIT1Q04433 528 aa5.03□□□□□ -1.6
ATG4YNL223W ASM4Q05166 528 aa5.03□□□□□ -1.6
ATG4YNL223W WTM2Q12206 467 aa5.03□□□□□ -1.6
ATG4YNL223W YLR146W-AQ2V2P1 62 aa5.03□□□□□ -1.6
ATG4YNL223W HUG1Q6Q5K6 68 aa5.03□□□□□ -1.6
ATG4YNL223W TRA1P38811 3744 aa5.03□□□□□ -1.6
ATG4YNL223W TEL1P38110 2787 aa5.02□□□□□ -1.61
ATG4YNL223W RPS23AP0CX29 145 aaKnown RBP5.02□□□□□ -1.61
ATG4YNL223W RPS23BP0CX30 145 aa5.02□□□□□ -1.61
ATG4YNL223W LSM12P38828 187 aaKnown RBP5.02□□□□□ -1.61
ATG4YNL223W ASP1P38986 381 aaPredicted RBP5.02□□□□□ -1.61
ATG4YNL223W SSO2P39926 295 aa5.02□□□□□ -1.61
ATG4YNL223W RMD6P39975 231 aa5.02□□□□□ -1.61
ATG4YNL223W RPL13BP40212 199 aaKnown RBP5.02□□□□□ -1.61
ATG4YNL223W GLR1P41921 483 aaKnown RBP5.02□□□□□ -1.61
ATG4YNL223W GON7P46984 123 aa5.02□□□□□ -1.61
ATG4YNL223W INN1P53901 409 aa5.02□□□□□ -1.61
ATG4YNL223W CRZ1P53968 678 aa5.02□□□□□ -1.61
ATG4YNL223W TIM44Q01852 431 aa5.02□□□□□ -1.61
ATG4YNL223W SKO1Q02100 647 aa5.02□□□□□ -1.61
ATG4YNL223W YPL067CQ02754 198 aa5.02□□□□□ -1.61
ATG4YNL223W YOR292CQ08743 309 aa5.02□□□□□ -1.61
ATG4YNL223W FCY22Q12119 530 aa5.02□□□□□ -1.61
ATG4YNL223W RPL13AQ12690 199 aaPredicted RBP5.02□□□□□ -1.61
ATG4YNL223W MRS4P23500 304 aa5.01□□□□□ -1.61
ATG4YNL223W RPD3P32561 433 aa5.01□□□□□ -1.61
ATG4YNL223W ERV15P38312 142 aa5.01□□□□□ -1.61
ATG4YNL223W TOK1P40310 691 aa5.01□□□□□ -1.61
ATG4YNL223W AGX1P43567 385 aa5.01□□□□□ -1.61
ATG4YNL223W GPI15P53961 229 aa5.01□□□□□ -1.61
ATG4YNL223W YDR114CQ04597 100 aa5.01□□□□□ -1.61
ATG4YNL223W ERP1Q05359 219 aaKnown RBP5.01□□□□□ -1.61
ATG4YNL223W BER1Q06688 274 aaKnown RBP5.01□□□□□ -1.61
ATG4YNL223W YLR108CQ12259 485 aa5.01□□□□□ -1.61
ATG4YNL223W RPP1AP05318 106 aaPredicted RBP5□□□□□ -1.61
ATG4YNL223W YGP1P38616 354 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W YEA6P39953 335 aa5□□□□□ -1.61
ATG4YNL223W YJR012CP47087 207 aa5□□□□□ -1.61
ATG4YNL223W SRB7P47822 140 aa5□□□□□ -1.61
ATG4YNL223W PKP2P53170 491 aa5□□□□□ -1.61
ATG4YNL223W YIF1P53845 314 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W HSK3P69852 69 aa5□□□□□ -1.61
ATG4YNL223W DPB4Q04603 196 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W RIM9Q04734 239 aa5□□□□□ -1.61
ATG4YNL223W LIP2Q06005 328 aa5□□□□□ -1.61
ATG4YNL223W YTH1Q06102 208 aaPredicted RBP5□□□□□ -1.61
ATG4YNL223W YOL029CQ08187 201 aa5□□□□□ -1.61
ATG4YNL223W ALG6Q12001 544 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W SWT1Q12104 458 aa5□□□□□ -1.61
ATG4YNL223W GCN1P33892 2672 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W SSA3P09435 649 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W YML003WP0CF16 290 aa5□□□□□ -1.61
ATG4YNL223W UBI4P0CG63 381 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W SHM2P37291 469 aaKnown RBP5□□□□□ -1.61
ATG4YNL223W BUL1P48524 976 aa5□□□□□ -1.61
ATG4YNL223W PHO23P50947 330 aa5□□□□□ -1.61
ATG4YNL223W SED1Q01589 338 aa5□□□□□ -1.61
ATG4YNL223W CAC2Q04199 468 aa5□□□□□ -1.61
ATG4YNL223W DGK1Q12382 290 aa5□□□□□ -1.61
ATG4YNL223W RPL39P04650 51 aa4.99□□□□□ -1.61
ATG4YNL223W DAL80P26343 269 aa4.99□□□□□ -1.61
ATG4YNL223W COQ2P32378 372 aa4.99□□□□□ -1.61
ATG4YNL223W PCL7P40186 285 aa4.99□□□□□ -1.61
ATG4YNL223W RFC2P40348 353 aa4.99□□□□□ -1.61
ATG4YNL223W MSO1P53604 210 aaKnown RBP4.99□□□□□ -1.61
ATG4YNL223W FCF2Q12035 217 aaPredicted RBP4.99□□□□□ -1.61
ATG4YNL223W COA2Q3E823 68 aa4.99□□□□□ -1.61
ATG4YNL223W YKL107WP34251 309 aa4.98□□□□□ -1.61
ATG4YNL223W CPR5P35176 225 aa4.98□□□□□ -1.61
ATG4YNL223W PRS3P38689 320 aaKnown RBP4.98□□□□□ -1.61
ATG4YNL223W SLM1P40485 686 aa4.98□□□□□ -1.61
ATG4YNL223W XPT1P47165 209 aa4.98□□□□□ -1.61
ATG4YNL223W CWC25P53854 179 aaKnown RBP4.98□□□□□ -1.61
ATG4YNL223W ODC1Q03028 310 aa4.98□□□□□ -1.61
ATG4YNL223W YDR415CQ04033 374 aaPredicted RBP4.98□□□□□ -1.61
ATG4YNL223W PRP11Q07350 266 aaPredicted RBP4.98□□□□□ -1.61
ATG4YNL223W PAM18Q07914 168 aa4.98□□□□□ -1.61
ATG4YNL223W RFM1Q12192 310 aa4.98□□□□□ -1.61
ATG4YNL223W YBR255C-AQ3E776 120 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms