RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W SNF4P12904 322 aa5.88□□□□□ -1.47
HDA1YNL021W DER1P38307 211 aa5.88□□□□□ -1.47
HDA1YNL021W MET31Q03081 177 aa5.88□□□□□ -1.47
HDA1YNL021W YMR010WQ03687 405 aa5.88□□□□□ -1.47
HDA1YNL021W YML096WQ04489 525 aa5.88□□□□□ -1.47
HDA1YNL021W RFU1Q08003 200 aa5.88□□□□□ -1.47
HDA1YNL021W SFM1Q12314 213 aa5.88□□□□□ -1.47
HDA1YNL021W SNU23Q12368 194 aaPredicted RBP5.88□□□□□ -1.47
HDA1YNL021W CCH1P50077 2039 aa5.88□□□□□ -1.47
HDA1YNL021W PUT1P09368 476 aa5.87□□□□□ -1.47
HDA1YNL021W SCO2P38072 301 aa5.87□□□□□ -1.47
HDA1YNL021W MBA1P38300 278 aa5.87□□□□□ -1.47
HDA1YNL021W RRS1Q08746 203 aaKnown RBP5.87□□□□□ -1.47
HDA1YNL021W VPS68Q12016 184 aa5.87□□□□□ -1.47
HDA1YNL021W RFM1Q12192 310 aa5.87□□□□□ -1.47
HDA1YNL021W CPT1P17898 393 aa5.87□□□□□ -1.47
HDA1YNL021W PPH21P23594 369 aa5.87□□□□□ -1.47
HDA1YNL021W SPS18P32572 300 aa5.87□□□□□ -1.47
HDA1YNL021W NAT2P37293 288 aa5.87□□□□□ -1.47
HDA1YNL021W GRE3P38715 327 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
HDA1YNL021W KRE29P40026 464 aa5.87□□□□□ -1.47
HDA1YNL021W PDS1P40316 373 aaPredicted RBP5.87□□□□□ -1.47
HDA1YNL021W SDC1Q03323 175 aa5.87□□□□□ -1.47
HDA1YNL021W YOR342CQ12182 319 aa5.87□□□□□ -1.47
HDA1YNL021W EAF3Q12432 401 aa5.87□□□□□ -1.47
HDA1YNL021W BIR1P47134 954 aa5.86□□□□□ -1.47
HDA1YNL021W SBH2P52871 88 aa5.86□□□□□ -1.47
HDA1YNL021W YGL235WP53071 178 aa5.86□□□□□ -1.47
HDA1YNL021W TPS1Q00764 495 aaKnown RBP5.86□□□□□ -1.47
HDA1YNL021W TPO4Q12256 659 aa5.86□□□□□ -1.47
HDA1YNL021W RPL15AP05748 204 aaKnown RBP5.86□□□□□ -1.47
HDA1YNL021W MET2P08465 486 aa5.86□□□□□ -1.47
HDA1YNL021W YOL163WP0CF20 169 aa5.86□□□□□ -1.47
HDA1YNL021W DBF2P22204 572 aa5.86□□□□□ -1.47
HDA1YNL021W MRPL20P22354 195 aaPredicted RBP5.86□□□□□ -1.47
HDA1YNL021W RRP3P38712 501 aaKnown RBP5.86□□□□□ -1.47
HDA1YNL021W GGC1P38988 300 aa5.86□□□□□ -1.47
HDA1YNL021W MOB2P43563 287 aa5.86□□□□□ -1.47
HDA1YNL021W JAC1P53193 184 aa5.86□□□□□ -1.47
HDA1YNL021W SEI1Q06058 285 aa5.86□□□□□ -1.47
HDA1YNL021W GPI11Q06636 219 aa5.86□□□□□ -1.47
HDA1YNL021W YOL131WQ08270 108 aa5.86□□□□□ -1.47
HDA1YNL021W YCR025CP25352 136 aa5.85□□□□□ -1.47
HDA1YNL021W CAM1P29547 415 aaKnown RBP5.85□□□□□ -1.47
HDA1YNL021W PTI1P39927 425 aaPredicted RBP5.85□□□□□ -1.47
HDA1YNL021W YJR085CP47131 105 aaKnown RBP5.85□□□□□ -1.47
HDA1YNL021W MMS2P53152 137 aa5.85□□□□□ -1.47
HDA1YNL021W YML018CQ03730 393 aa5.85□□□□□ -1.47
HDA1YNL021W HNT3Q08702 217 aa5.85□□□□□ -1.47
HDA1YNL021W ATP16Q12165 160 aa5.85□□□□□ -1.47
HDA1YNL021W MHF2Q3E829 80 aa5.85□□□□□ -1.47
HDA1YNL021W YDR034W-BQ6Q5X2 51 aa5.85□□□□□ -1.47
HDA1YNL021W YPR096CO13587 100 aa5.84□□□□□ -1.47
HDA1YNL021W TRP1P00912 224 aa5.84□□□□□ -1.47
HDA1YNL021W SPT15P13393 240 aaKnown RBP5.84□□□□□ -1.47
HDA1YNL021W TRX3P25372 127 aa5.84□□□□□ -1.47
HDA1YNL021W ALK2P32789 676 aaPredicted RBP5.84□□□□□ -1.47
HDA1YNL021W YIL029CP40538 142 aa5.84□□□□□ -1.47
HDA1YNL021W MCM22P47167 239 aa5.84□□□□□ -1.47
HDA1YNL021W YNR066CP53752 436 aa5.84□□□□□ -1.47
HDA1YNL021W HEM25Q07534 307 aa5.84□□□□□ -1.47
HDA1YNL021W UBC8P28263 218 aa5.84□□□□□ -1.47
HDA1YNL021W SEC17P32602 292 aa5.84□□□□□ -1.47
HDA1YNL021W YKR041WP36134 250 aa5.84□□□□□ -1.47
HDA1YNL021W CCC1P47818 322 aa5.84□□□□□ -1.47
HDA1YNL021W BRR6P53062 197 aa5.84□□□□□ -1.47
HDA1YNL021W NRK1P53915 240 aa5.84□□□□□ -1.47
HDA1YNL021W MDM35O60200 86 aa5.83□□□□□ -1.48
HDA1YNL021W IFM1P25038 676 aa5.83□□□□□ -1.48
HDA1YNL021W TRR1P29509 319 aaKnown RBP5.83□□□□□ -1.48
HDA1YNL021W CAT2P32796 670 aaKnown RBP5.83□□□□□ -1.48
HDA1YNL021W UPS2P35200 230 aa5.83□□□□□ -1.48
HDA1YNL021W WSC4P38739 605 aa5.83□□□□□ -1.48
HDA1YNL021W BDH1P39714 382 aa5.83□□□□□ -1.48
HDA1YNL021W ERP1Q05359 219 aaKnown RBP5.83□□□□□ -1.48
HDA1YNL021W HSP30P25619 332 aa5.83□□□□□ -1.48
HDA1YNL021W ANR2P36090 516 aaPredicted RBP5.83□□□□□ -1.48
HDA1YNL021W PDR17P53844 350 aa5.83□□□□□ -1.48
HDA1YNL021W TMA20P89886 181 aaPredicted RBP5.83□□□□□ -1.48
HDA1YNL021W RHO3Q00245 231 aaKnown RBP5.83□□□□□ -1.48
HDA1YNL021W YOR292CQ08743 309 aa5.83□□□□□ -1.48
HDA1YNL021W WIP1Q2V2P8 89 aa5.83□□□□□ -1.48
HDA1YNL021W MRPL3P36516 390 aa5.82□□□□□ -1.48
HDA1YNL021W MDM31P38880 579 aa5.82□□□□□ -1.48
HDA1YNL021W YGR201CP42936 225 aa5.82□□□□□ -1.48
HDA1YNL021W MOG1P47123 218 aa5.82□□□□□ -1.48
HDA1YNL021W YPL113CQ02961 396 aa5.82□□□□□ -1.48
HDA1YNL021W YPR127WQ06494 345 aa5.82□□□□□ -1.48
HDA1YNL021W MRX4Q12467 430 aa5.82□□□□□ -1.48
HDA1YNL021W NAG1Q8TGN9 163 aa5.82□□□□□ -1.48
HDA1YNL021W STT4P37297 1900 aa5.82□□□□□ -1.48
HDA1YNL021W NHP6AP11632 93 aaKnown RBP5.81□□□□□ -1.48
HDA1YNL021W SCL1P21243 252 aaKnown RBP5.81□□□□□ -1.48
HDA1YNL021W MDH3P32419 343 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
HDA1YNL021W YIL152WP40455 235 aa5.81□□□□□ -1.48
HDA1YNL021W COQ5P49017 307 aa5.81□□□□□ -1.48
HDA1YNL021W BNS1P50084 137 aa5.81□□□□□ -1.48
HDA1YNL021W CWC25P53854 179 aaKnown RBP5.81□□□□□ -1.48
HDA1YNL021W YMD8Q03697 442 aa5.81□□□□□ -1.48
HDA1YNL021W DTD1Q07648 150 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms