RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C CCC1P47818 322 aa3.72□□□□□ -1.81
CCS1YMR038C AVT4P50944 713 aa3.72□□□□□ -1.81
CCS1YMR038C YGL114WP53134 725 aa3.72□□□□□ -1.81
CCS1YMR038C YLR152CP54072 576 aa3.72□□□□□ -1.81
CCS1YMR038C ARR2Q06597 130 aa3.72□□□□□ -1.81
CCS1YMR038C TSR2Q06672 205 aaKnown RBP3.72□□□□□ -1.81
CCS1YMR038C EAF3Q12432 401 aa3.72□□□□□ -1.81
CCS1YMR038C RNA14P25298 677 aaKnown RBP3.71□□□□□ -1.82
CCS1YMR038C ADH5P38113 351 aaKnown RBP3.71□□□□□ -1.82
CCS1YMR038C THI2P38141 450 aa3.71□□□□□ -1.82
CCS1YMR038C HXT14P42833 540 aa3.71□□□□□ -1.82
CCS1YMR038C PAM16P42949 149 aa3.71□□□□□ -1.82
CCS1YMR038C GWT1P47026 490 aa3.71□□□□□ -1.82
CCS1YMR038C XPT1P47165 209 aa3.71□□□□□ -1.82
CCS1YMR038C MRH4P53166 561 aa3.71□□□□□ -1.82
CCS1YMR038C YPL067CQ02754 198 aa3.71□□□□□ -1.82
CCS1YMR038C NMA1Q06178 401 aaKnown RBP3.71□□□□□ -1.82
CCS1YMR038C HEM25Q07534 307 aa3.71□□□□□ -1.82
CCS1YMR038C RFM1Q12192 310 aa3.71□□□□□ -1.82
CCS1YMR038C HUT1Q12520 339 aa3.71□□□□□ -1.82
CCS1YMR038C CDC31P06704 161 aaKnown RBP3.7□□□□□ -1.82
CCS1YMR038C ATR1P13090 542 aa3.7□□□□□ -1.82
CCS1YMR038C PHO85P17157 305 aa3.7□□□□□ -1.82
CCS1YMR038C ATP10P18496 279 aa3.7□□□□□ -1.82
CCS1YMR038C NAT2P37293 288 aa3.7□□□□□ -1.82
CCS1YMR038C SLM4P38247 162 aa3.7□□□□□ -1.82
CCS1YMR038C SSH1P38353 490 aaKnown RBP3.7□□□□□ -1.82
CCS1YMR038C RIO2P40160 425 aaKnown RBP3.7□□□□□ -1.82
CCS1YMR038C ERJ5P43613 295 aaPredicted RBP3.7□□□□□ -1.82
CCS1YMR038C FIP1P45976 327 aa3.7□□□□□ -1.82
CCS1YMR038C COG5P53951 403 aa3.7□□□□□ -1.82
CCS1YMR038C YMR252CQ04814 134 aa3.7□□□□□ -1.82
CCS1YMR038C YLR173WQ06247 608 aa3.7□□□□□ -1.82
CCS1YMR038C ASR1Q06834 288 aa3.7□□□□□ -1.82
CCS1YMR038C YPL225WQ08971 146 aaKnown RBP3.7□□□□□ -1.82
CCS1YMR038C FCY1Q12178 158 aa3.7□□□□□ -1.82
CCS1YMR038C CDC28P00546 298 aaKnown RBP3.69□□□□□ -1.82
CCS1YMR038C RPL25P04456 142 aaKnown RBP3.69□□□□□ -1.82
CCS1YMR038C PRP21P32524 280 aaPredicted RBP3.69□□□□□ -1.82
CCS1YMR038C AST1P35183 429 aa3.69□□□□□ -1.82
CCS1YMR038C SOR1P35497 357 aaKnown RBP3.69□□□□□ -1.82
CCS1YMR038C YRA2P36036 203 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
CCS1YMR038C FMC1P40491 155 aa3.69□□□□□ -1.82
CCS1YMR038C FMP33P46998 180 aa3.69□□□□□ -1.82
CCS1YMR038C SSN8P47821 323 aa3.69□□□□□ -1.82
CCS1YMR038C YGL262WP53054 175 aa3.69□□□□□ -1.82
CCS1YMR038C RPL21AQ02753 160 aaKnown RBP3.69□□□□□ -1.82
CCS1YMR038C SOR2Q07786 357 aa3.69□□□□□ -1.82
CCS1YMR038C RPL21BQ12672 160 aaKnown RBP3.69□□□□□ -1.82
CCS1YMR038C IDP1P21954 428 aaKnown RBP3.68□□□□□ -1.82
CCS1YMR038C ERG3P32353 365 aa3.68□□□□□ -1.82
CCS1YMR038C TMA19P35691 167 aaKnown RBP3.68□□□□□ -1.82
CCS1YMR038C SDS24P38314 527 aa3.68□□□□□ -1.82
CCS1YMR038C CUE1P38428 203 aa3.68□□□□□ -1.82
CCS1YMR038C SNL1P40548 159 aa3.68□□□□□ -1.82
CCS1YMR038C RPA43P46669 326 aa3.68□□□□□ -1.82
CCS1YMR038C POP6P53218 158 aa3.68□□□□□ -1.82
CCS1YMR038C YLR283WQ05867 314 aa3.68□□□□□ -1.82
CCS1YMR038C LIP2Q06005 328 aa3.68□□□□□ -1.82
CCS1YMR038C ATO3Q12359 275 aa3.68□□□□□ -1.82
CCS1YMR038C YGL041W-AP0C5N3 154 aa3.67□□□□□ -1.82
CCS1YMR038C TOM40P23644 387 aaKnown RBP3.67□□□□□ -1.82
CCS1YMR038C FUN26P31381 517 aa3.67□□□□□ -1.82
CCS1YMR038C WWM1P43582 211 aaKnown RBP3.67□□□□□ -1.82
CCS1YMR038C OKP1P53298 406 aa3.67□□□□□ -1.82
CCS1YMR038C SPG4Q04438 115 aa3.67□□□□□ -1.82
CCS1YMR038C MRX9Q07349 420 aaKnown RBP3.67□□□□□ -1.82
CCS1YMR038C YOR186WQ08560 144 aa3.67□□□□□ -1.82
CCS1YMR038C VAM3Q12241 283 aa3.67□□□□□ -1.82
CCS1YMR038C YPR1Q12458 312 aa3.67□□□□□ -1.82
CCS1YMR038C ADK1P07170 222 aaKnown RBP3.66□□□□□ -1.82
CCS1YMR038C ATG22P25568 528 aa3.66□□□□□ -1.82
CCS1YMR038C YKL063CP35725 167 aa3.66□□□□□ -1.82
CCS1YMR038C RCN1P36054 211 aa3.66□□□□□ -1.82
CCS1YMR038C SOP4P39543 234 aaPredicted RBP3.66□□□□□ -1.82
CCS1YMR038C MRX5P47007 382 aa3.66□□□□□ -1.82
CCS1YMR038C YJR056CP47115 236 aa3.66□□□□□ -1.82
CCS1YMR038C YGR149WP48236 432 aa3.66□□□□□ -1.82
CCS1YMR038C YGL204CP53089 101 aa3.66□□□□□ -1.82
CCS1YMR038C PAU12P53343 120 aa3.66□□□□□ -1.82
CCS1YMR038C BOR1P53838 576 aa3.66□□□□□ -1.82
CCS1YMR038C MIX17Q03667 156 aa3.66□□□□□ -1.82
CCS1YMR038C PEX30Q06169 523 aa3.66□□□□□ -1.82
CCS1YMR038C YGK3Q12222 375 aaPredicted RBP3.66□□□□□ -1.82
CCS1YMR038C BBP1Q12365 385 aa3.66□□□□□ -1.82
CCS1YMR038C ORT1Q12375 292 aa3.66□□□□□ -1.82
CCS1YMR038C FRE6Q12473 712 aa3.66□□□□□ -1.82
CCS1YMR038C SPS4P09937 338 aa3.65□□□□□ -1.83
CCS1YMR038C MATALPHA1P0CY06 175 aa3.65□□□□□ -1.83
CCS1YMR038C HMLALPHA1P0CY07 175 aa3.65□□□□□ -1.83
CCS1YMR038C MRP1P10662 321 aaKnown RBP3.65□□□□□ -1.83
CCS1YMR038C SNC2P33328 115 aa3.65□□□□□ -1.83
CCS1YMR038C CBT1P36038 271 aaPredicted RBP3.65□□□□□ -1.83
CCS1YMR038C SWD2P36104 329 aaPredicted RBP3.65□□□□□ -1.83
CCS1YMR038C PAU24P38155 120 aa3.65□□□□□ -1.83
CCS1YMR038C UMP1P38293 148 aa3.65□□□□□ -1.83
CCS1YMR038C TTI2P47168 421 aa3.65□□□□□ -1.83
CCS1YMR038C RSM27P53305 110 aa3.65□□□□□ -1.83
CCS1YMR038C HSK3P69852 69 aa3.65□□□□□ -1.83
CCS1YMR038C ECM18Q04623 453 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms