RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C ERG28P40030 148 aa2.39□□□□□ -2.03
BLS1YLR408C VTC1P40046 129 aaRIP-Chip data2.39□□□□□ -2.03not detected
BLS1YLR408C AIF1P52923 378 aa2.39□□□□□ -2.03
BLS1YLR408C RNH1Q04740 348 aa2.39□□□□□ -2.03
BLS1YLR408C RPL28P02406 149 aaKnown RBP2.38□□□□□ -2.03
BLS1YLR408C SEC17P32602 292 aa2.38□□□□□ -2.03
BLS1YLR408C DOC1P53068 250 aa2.38□□□□□ -2.03
BLS1YLR408C BOL2P53082 120 aa2.38□□□□□ -2.03
BLS1YLR408C SML1Q04964 104 aa2.38□□□□□ -2.03
BLS1YLR408C TDA8Q6B2U8 126 aa2.38□□□□□ -2.03
BLS1YLR408C RPL27BP0C2H7 136 aaKnown RBP2.37□□□□□ -2.03
BLS1YLR408C COQ1P18900 473 aa2.37□□□□□ -2.03
BLS1YLR408C APS1P35181 156 aa2.37□□□□□ -2.03
BLS1YLR408C MRPL28P36527 147 aa2.37□□□□□ -2.03
BLS1YLR408C YRB2P40517 327 aa2.37□□□□□ -2.03
BLS1YLR408C SWP1Q02795 286 aa2.37□□□□□ -2.03
BLS1YLR408C SNZ1Q03148 297 aa2.37□□□□□ -2.03
BLS1YLR408C SEC4P07560 215 aaKnown RBP2.36□□□□□ -2.03
BLS1YLR408C IRC18P47056 224 aa2.36□□□□□ -2.03
BLS1YLR408C RAD17P48581 401 aa2.36□□□□□ -2.03
BLS1YLR408C TIM11P81449 96 aaPredicted RBP2.36□□□□□ -2.03
BLS1YLR408C JLP1Q12358 412 aa2.36□□□□□ -2.03
BLS1YLR408C CDC33P07260 213 aaKnown RBP2.35□□□□□ -2.03
BLS1YLR408C MRPL17P36528 281 aa2.35□□□□□ -2.03
BLS1YLR408C UMP1P38293 148 aa2.35□□□□□ -2.03
BLS1YLR408C YNL194CP40169 301 aa2.35□□□□□ -2.03
BLS1YLR408C PDR17P53844 350 aa2.35□□□□□ -2.03
BLS1YLR408C MCP1Q12106 302 aa2.35□□□□□ -2.03
BLS1YLR408C YDR157WA0A023PZE8 133 aa2.34□□□□□ -2.03
BLS1YLR408C STE18P18852 110 aa2.34□□□□□ -2.03
BLS1YLR408C MRPS28P21771 286 aa2.34□□□□□ -2.03
BLS1YLR408C PRP18P33411 251 aaPredicted RBP2.34□□□□□ -2.03
BLS1YLR408C CBT1P36038 271 aaPredicted RBP2.34□□□□□ -2.03
BLS1YLR408C YNL217WP40152 326 aa2.34□□□□□ -2.03
BLS1YLR408C ADO1P47143 340 aaKnown RBP2.34□□□□□ -2.03
BLS1YLR408C GAS3Q03655 524 aa2.34□□□□□ -2.03
BLS1YLR408C ARG80P07249 177 aa2.33□□□□□ -2.04
BLS1YLR408C GCN3P14741 305 aa2.33□□□□□ -2.04
BLS1YLR408C IDH1P28834 360 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
BLS1YLR408C UTP30P36144 274 aaKnown RBP2.33□□□□□ -2.04
BLS1YLR408C YBR219CP38317 127 aa2.33□□□□□ -2.04
BLS1YLR408C CWC23P52868 283 aaPredicted RBP2.33□□□□□ -2.04
BLS1YLR408C YGR050CP53231 118 aa2.33□□□□□ -2.04
BLS1YLR408C PGA2P53903 129 aa2.33□□□□□ -2.04
BLS1YLR408C TSC3Q3E790 80 aa2.33□□□□□ -2.04
BLS1YLR408C TIM9O74700 87 aa2.32□□□□□ -2.04
BLS1YLR408C YOL162WP0CF19 215 aa2.32□□□□□ -2.04
BLS1YLR408C YGL010WP25338 174 aa2.32□□□□□ -2.04
BLS1YLR408C FZF1P32805 299 aa2.32□□□□□ -2.04
BLS1YLR408C YET1P35723 206 aa2.31□□□□□ -2.04
BLS1YLR408C PET191Q02772 108 aa2.31□□□□□ -2.04
BLS1YLR408C YLR162WQ06235 118 aa2.31□□□□□ -2.04
BLS1YLR408C FSF1Q12029 327 aaKnown RBP2.31□□□□□ -2.04
BLS1YLR408C SNC2P33328 115 aa2.3□□□□□ -2.04
BLS1YLR408C SKG1P36169 355 aa2.3□□□□□ -2.04
BLS1YLR408C YBR220CP38318 560 aa2.3□□□□□ -2.04
BLS1YLR408C YDR249CQ03787 373 aa2.3□□□□□ -2.04
BLS1YLR408C CSI2Q08054 341 aa2.3□□□□□ -2.04
BLS1YLR408C MGM101P32787 269 aaKnown RBP2.29□□□□□ -2.04
BLS1YLR408C TAF14P35189 244 aa2.29□□□□□ -2.04
BLS1YLR408C GAA1P39012 614 aa2.29□□□□□ -2.04
BLS1YLR408C GVP36P40531 326 aaKnown RBP2.29□□□□□ -2.04
BLS1YLR408C YNR077CP53758 84 aa2.29□□□□□ -2.04
BLS1YLR408C GPM2Q12008 311 aa2.29□□□□□ -2.04
BLS1YLR408C PDR18P53756 1333 aa2.28□□□□□ -2.04
BLS1YLR408C KSS1P14681 368 aa2.28□□□□□ -2.04
BLS1YLR408C UPS2P35200 230 aa2.28□□□□□ -2.04
BLS1YLR408C YKR045CP36138 183 aa2.28□□□□□ -2.04
BLS1YLR408C YNG1Q08465 219 aa2.28□□□□□ -2.04
BLS1YLR408C YPL162CQ12042 273 aa2.28□□□□□ -2.04
BLS1YLR408C IKI1P38874 309 aa2.27□□□□□ -2.05
BLS1YLR408C RMD6P39975 231 aa2.27□□□□□ -2.05
BLS1YLR408C GLE2P40066 365 aa2.27□□□□□ -2.05
BLS1YLR408C COG5P53951 403 aa2.27□□□□□ -2.05
BLS1YLR408C BNA7Q04066 261 aa2.27□□□□□ -2.05
BLS1YLR408C GIS3Q12418 502 aa2.27□□□□□ -2.05
BLS1YLR408C FLO9P39712 1322 aa2.26□□□□□ -2.05
BLS1YLR408C URA5P13298 226 aaKnown RBP2.26□□□□□ -2.05
BLS1YLR408C SHE2P36068 246 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
BLS1YLR408C RPL13BP40212 199 aaKnown RBP2.26□□□□□ -2.05
BLS1YLR408C LSM7P53905 115 aaKnown RBP2.26□□□□□ -2.05
BLS1YLR408C ANT1Q06497 328 aa2.26□□□□□ -2.05
BLS1YLR408C RPL13AQ12690 199 aaPredicted RBP2.26□□□□□ -2.05
BLS1YLR408C TUS1Q06412 1307 aa2.25□□□□□ -2.05
BLS1YLR408C RPL2AP0CX45 254 aaKnown RBP2.25□□□□□ -2.05
BLS1YLR408C RPL2BP0CX46 254 aaKnown RBP2.25□□□□□ -2.05
BLS1YLR408C RPB3P16370 318 aaKnown RBP2.25□□□□□ -2.05
BLS1YLR408C BET1P22804 142 aa2.25□□□□□ -2.05
BLS1YLR408C TMA19P35691 167 aaKnown RBP2.25□□□□□ -2.05
BLS1YLR408C YCR087C-AP37263 153 aa2.25□□□□□ -2.05
BLS1YLR408C POP3P53833 195 aaPredicted RBP2.25□□□□□ -2.05
BLS1YLR408C MZM1Q03429 123 aaPredicted RBP2.25□□□□□ -2.05
BLS1YLR408C YHR214C-EQ8TGK0 99 aa2.25□□□□□ -2.05
BLS1YLR408C YFR032C-BQ8TGU2 87 aa2.25□□□□□ -2.05
BLS1YLR408C ATG40Q99325 256 aa2.25□□□□□ -2.05
BLS1YLR408C RPB4P20433 221 aaPredicted RBP2.24□□□□□ -2.05
BLS1YLR408C MAG1P22134 296 aaKnown RBP2.24□□□□□ -2.05
BLS1YLR408C NTG1P31378 399 aa2.24□□□□□ -2.05
BLS1YLR408C PTM1P32857 523 aa2.24□□□□□ -2.05
BLS1YLR408C MER1P16523 270 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms