RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	MDM32	Q12171	622 aa		3.52	□□□□□ -1.85
RSA3	YLR221C	TDA8	Q6B2U8	126 aa		3.52	□□□□□ -1.85
RSA3	YLR221C	MER1	P16523	270 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	SKG1	P36169	355 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	MRPL28	P36527	147 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	YRB2	P40517	327 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	LSM7	P53905	115 aa	Known RBP	3.51	□□□□□ -1.85
RSA3	YLR221C	RGM1	Q00453	211 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	SNZ1	Q03148	297 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	ARR2	Q06597	130 aa		3.51	□□□□□ -1.85
RSA3	YLR221C	REP2	P03872	296 aa		3.5	□□□□□ -1.85
RSA3	YLR221C	RPL25	P04456	142 aa	Known RBP	3.5	□□□□□ -1.85
RSA3	YLR221C	CDC7	P06243	507 aa		3.5	□□□□□ -1.85
RSA3	YLR221C	YGR219W	P53307	113 aa		3.5	□□□□□ -1.85
RSA3	YLR221C	GAS3	Q03655	524 aa		3.5	□□□□□ -1.85
RSA3	YLR221C	NEJ1	Q06148	342 aa		3.5	□□□□□ -1.85
RSA3	YLR221C	RAD9	P14737	1309 aa		3.49	□□□□□ -1.85
RSA3	YLR221C	SAC3	P46674	1301 aa		3.49	□□□□□ -1.85
RSA3	YLR221C	YOR062C	P36025	268 aa		3.49	□□□□□ -1.85
RSA3	YLR221C	AST2	P39945	430 aa	Known RBP	3.49	□□□□□ -1.85
RSA3	YLR221C	MMS2	P53152	137 aa		3.49	□□□□□ -1.85
RSA3	YLR221C	YGR050C	P53231	118 aa		3.49	□□□□□ -1.85
RSA3	YLR221C	CGI121	Q03705	181 aa	Known RBP	3.49	□□□□□ -1.85
RSA3	YLR221C	ATO3	Q12359	275 aa		3.49	□□□□□ -1.85
RSA3	YLR221C	YLR156W	P0CE96	114 aa		3.48	□□□□□ -1.85
RSA3	YLR221C	YLR159W	P0CE97	114 aa		3.48	□□□□□ -1.85
RSA3	YLR221C	YLR161W	P0CE98	114 aa		3.48	□□□□□ -1.85
RSA3	YLR221C	MAG1	P22134	296 aa	Known RBP	3.48	□□□□□ -1.85
RSA3	YLR221C	PTM1	P32857	523 aa		3.48	□□□□□ -1.85
RSA3	YLR221C	DAD3	P69850	94 aa		3.48	□□□□□ -1.85
RSA3	YLR221C	TRM12	Q04235	462 aa		3.48	□□□□□ -1.85
RSA3	YLR221C	YOR283W	Q12040	230 aa	Known RBP	3.48	□□□□□ -1.85
RSA3	YLR221C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
RSA3	YLR221C	PET191	Q02772	108 aa		3.47	□□□□□ -1.85
RSA3	YLR221C	YHR214C-E	Q8TGK0	99 aa		3.47	□□□□□ -1.85
RSA3	YLR221C	SNF6	P18888	332 aa		3.46	□□□□□ -1.86
RSA3	YLR221C	CIS3	P47001	227 aa		3.46	□□□□□ -1.86
RSA3	YLR221C	YPL162C	Q12042	273 aa		3.46	□□□□□ -1.86
RSA3	YLR221C	KSS1	P14681	368 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	PEX4	P29340	183 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	SEC17	P32602	292 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	YHR180W	P38868	163 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	HMF1	P40037	129 aa	Known RBP	3.45	□□□□□ -1.86
RSA3	YLR221C	PRM10	P42946	383 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	AIF1	P52923	378 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	COG5	P53951	403 aa		3.45	□□□□□ -1.86
RSA3	YLR221C	ADE1	P27616	306 aa		3.44	□□□□□ -1.86
RSA3	YLR221C	HOP2	P53187	214 aa		3.44	□□□□□ -1.86
RSA3	YLR221C	SWP1	Q02795	286 aa		3.44	□□□□□ -1.86
RSA3	YLR221C	MRPS8	Q03799	155 aa		3.44	□□□□□ -1.86
RSA3	YLR221C	TSC3	Q3E790	80 aa		3.44	□□□□□ -1.86
RSA3	YLR221C	CHD1	P32657	1468 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	MRPS28	P21771	286 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	APA2	P22108	325 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	MEI4	P29467	408 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	UTP30	P36144	274 aa	Known RBP	3.43	□□□□□ -1.86
RSA3	YLR221C	PGD1	P40356	397 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	AIM25	P47140	327 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.43	□□□□□ -1.86	not detected
RSA3	YLR221C	YNG1	Q08465	219 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	GPM2	Q12008	311 aa		3.43	□□□□□ -1.86
RSA3	YLR221C	URA5	P13298	226 aa	Known RBP	3.42	□□□□□ -1.86
RSA3	YLR221C	BET1	P22804	142 aa		3.42	□□□□□ -1.86
RSA3	YLR221C	ERV15	P38312	142 aa		3.42	□□□□□ -1.86
RSA3	YLR221C	YDR249C	Q03787	373 aa		3.42	□□□□□ -1.86
RSA3	YLR221C	YOL160W	Q08321	113 aa		3.42	□□□□□ -1.86
RSA3	YLR221C	MCP1	Q12106	302 aa		3.42	□□□□□ -1.86
RSA3	YLR221C	USB1	Q12208	290 aa	Known RBP	3.42	□□□□□ -1.86
RSA3	YLR221C	FBA1	P14540	359 aa	Known RBP	3.41	□□□□□ -1.86
RSA3	YLR221C	ASF2	P32448	525 aa	Predicted RBP	3.41	□□□□□ -1.86
RSA3	YLR221C	YKE4	P40544	346 aa		3.41	□□□□□ -1.86
RSA3	YLR221C	IKI3	Q06706	1349 aa	Known RBP	3.41	□□□□□ -1.86
RSA3	YLR221C	MRS1	P07266	363 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	ATP7	P30902	174 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	CAF4	P36130	643 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	PHO88	P38264	188 aa	Predicted RBP	3.4	□□□□□ -1.87
RSA3	YLR221C	ICE2	P40499	491 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	RPL33B	P41056	107 aa	Known RBP	3.4	□□□□□ -1.87
RSA3	YLR221C	DAN1	P47178	298 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	RTC4	P53850	401 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	GGA1	Q06336	557 aa		3.4	□□□□□ -1.87
RSA3	YLR221C	SCL1	P21243	252 aa	Known RBP	3.39	□□□□□ -1.87
RSA3	YLR221C	MRPL17	P36528	281 aa		3.39	□□□□□ -1.87
RSA3	YLR221C	ERG25	P53045	309 aa		3.39	□□□□□ -1.87
RSA3	YLR221C	SPG3	Q04398	127 aa	Predicted RBP	3.39	□□□□□ -1.87
RSA3	YLR221C	YFR032C-B	Q8TGU2	87 aa		3.39	□□□□□ -1.87
RSA3	YLR221C	TIM9	O74700	87 aa		3.38	□□□□□ -1.87
RSA3	YLR221C	SIR2	P06700	562 aa		3.38	□□□□□ -1.87
RSA3	YLR221C	RPB3	P16370	318 aa	Known RBP	3.38	□□□□□ -1.87
RSA3	YLR221C	IGO1	P53897	168 aa		3.38	□□□□□ -1.87
RSA3	YLR221C	TLG1	Q03322	224 aa		3.38	□□□□□ -1.87
RSA3	YLR221C	CKS1	P20486	150 aa	Known RBP	3.37	□□□□□ -1.87
RSA3	YLR221C	SNC2	P33328	115 aa		3.37	□□□□□ -1.87
RSA3	YLR221C	UMP1	P38293	148 aa		3.37	□□□□□ -1.87
RSA3	YLR221C	YNR062C	P53748	327 aa		3.37	□□□□□ -1.87
RSA3	YLR221C	FUS2	Q05670	677 aa		3.37	□□□□□ -1.87
RSA3	YLR221C	YET3	Q07451	203 aa		3.37	□□□□□ -1.87
RSA3	YLR221C	PET9	P18239	318 aa	Known RBP	3.36	□□□□□ -1.87
RSA3	YLR221C	NRG2	P38082	220 aa		3.36	□□□□□ -1.87
RSA3	YLR221C	SHG1	P38337	142 aa		3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms