RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W MNN5P46982 586 aa0.94□□□□□ -2.26
SLX4YLR135W GIM3P53900 129 aa0.94□□□□□ -2.26
SLX4YLR135W SNZ1Q03148 297 aa0.94□□□□□ -2.26
SLX4YLR135W MIX17Q03667 156 aa0.94□□□□□ -2.26
SLX4YLR135W TRM12Q04235 462 aa0.94□□□□□ -2.26
SLX4YLR135W NEJ1Q06148 342 aa0.94□□□□□ -2.26
SLX4YLR135W GGA1Q06336 557 aa0.94□□□□□ -2.26
SLX4YLR135W SUE1Q06524 206 aa0.94□□□□□ -2.26
SLX4YLR135W YNG1Q08465 219 aa0.94□□□□□ -2.26
SLX4YLR135W YOR283WQ12040 230 aaKnown RBP0.94□□□□□ -2.26
SLX4YLR135W CDC8P00572 216 aa0.93□□□□□ -2.26
SLX4YLR135W YPR170W-BP0C5R9 85 aa0.93□□□□□ -2.26
SLX4YLR135W KSS1P14681 368 aa0.93□□□□□ -2.26
SLX4YLR135W MER1P16523 270 aa0.93□□□□□ -2.26
SLX4YLR135W ATG22P25568 528 aa0.93□□□□□ -2.26
SLX4YLR135W MDH3P32419 343 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
SLX4YLR135W ASF2P32448 525 aaPredicted RBP0.93□□□□□ -2.26
SLX4YLR135W SPS18P32572 300 aa0.93□□□□□ -2.26
SLX4YLR135W GRE3P38715 327 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
SLX4YLR135W DSK2P48510 373 aa0.93□□□□□ -2.26
SLX4YLR135W MMS2P53152 137 aa0.93□□□□□ -2.26
SLX4YLR135W COG5P53951 403 aa0.93□□□□□ -2.26
SLX4YLR135W PET191Q02772 108 aa0.93□□□□□ -2.26
SLX4YLR135W YDR249CQ03787 373 aa0.93□□□□□ -2.26
SLX4YLR135W CDD1Q06549 142 aa0.93□□□□□ -2.26
SLX4YLR135W USB1Q12208 290 aaKnown RBP0.93□□□□□ -2.26
SLX4YLR135W MHT1Q12525 324 aa0.93□□□□□ -2.26
SLX4YLR135W SAC3P46674 1301 aa0.93□□□□□ -2.26
SLX4YLR135W RPL25P04456 142 aaKnown RBP0.93□□□□□ -2.26
SLX4YLR135W PEX4P29340 183 aa0.93□□□□□ -2.26
SLX4YLR135W VMA11P32842 164 aa0.93□□□□□ -2.26
SLX4YLR135W HMF1P40037 129 aaKnown RBP0.93□□□□□ -2.26
SLX4YLR135W YIL001WP40560 513 aa0.93□□□□□ -2.26
SLX4YLR135W AIF1P52923 378 aa0.93□□□□□ -2.26
SLX4YLR135W IGO1P53897 168 aa0.93□□□□□ -2.26
SLX4YLR135W SWP1Q02795 286 aa0.93□□□□□ -2.26
SLX4YLR135W PRM15Q03262 622 aa0.93□□□□□ -2.26
SLX4YLR135W RDS3Q06835 107 aaPredicted RBP0.93□□□□□ -2.26
SLX4YLR135W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
SLX4YLR135W TSC3Q3E790 80 aa0.93□□□□□ -2.26
SLX4YLR135W YLR156WP0CE96 114 aa0.92□□□□□ -2.26
SLX4YLR135W YLR159WP0CE97 114 aa0.92□□□□□ -2.26
SLX4YLR135W YLR161WP0CE98 114 aa0.92□□□□□ -2.26
SLX4YLR135W UTP30P36144 274 aaKnown RBP0.92□□□□□ -2.26
SLX4YLR135W YHR180WP38868 163 aa0.92□□□□□ -2.26
SLX4YLR135W RMD6P39975 231 aa0.92□□□□□ -2.26
SLX4YLR135W MCP1Q12106 302 aa0.92□□□□□ -2.26
SLX4YLR135W MDM32Q12171 622 aa0.92□□□□□ -2.26
SLX4YLR135W TDA8Q6B2U8 126 aa0.92□□□□□ -2.26
SLX4YLR135W RAD9P14737 1309 aa0.92□□□□□ -2.26
SLX4YLR135W IKI3Q06706 1349 aaKnown RBP0.92□□□□□ -2.26
SLX4YLR135W MRS1P07266 363 aa0.92□□□□□ -2.26
SLX4YLR135W URA5P13298 226 aaKnown RBP0.92□□□□□ -2.26
SLX4YLR135W RPB3P16370 318 aaKnown RBP0.92□□□□□ -2.26
SLX4YLR135W SCL1P21243 252 aaKnown RBP0.92□□□□□ -2.26
SLX4YLR135W CNB1P25296 175 aa0.92□□□□□ -2.26
SLX4YLR135W ATP7P30902 174 aa0.92□□□□□ -2.26
SLX4YLR135W PTM1P32857 523 aa0.92□□□□□ -2.26
SLX4YLR135W SVP26P38869 228 aa0.92□□□□□ -2.26
SLX4YLR135W PGD1P40356 397 aa0.92□□□□□ -2.26
SLX4YLR135W ICE2P40499 491 aa0.92□□□□□ -2.26
SLX4YLR135W ERG10P41338 398 aaKnown RBP0.92□□□□□ -2.26
SLX4YLR135W YGR219WP53307 113 aa0.92□□□□□ -2.26
SLX4YLR135W RTC4P53850 401 aa0.92□□□□□ -2.26
SLX4YLR135W RGM1Q00453 211 aa0.92□□□□□ -2.26
SLX4YLR135W MRPS8Q03799 155 aa0.92□□□□□ -2.26
SLX4YLR135W YPL162CQ12042 273 aa0.92□□□□□ -2.26
SLX4YLR135W FBA1P14540 359 aaKnown RBP0.91□□□□□ -2.26
SLX4YLR135W APA2P22108 325 aa0.91□□□□□ -2.26
SLX4YLR135W BET1P22804 142 aa0.91□□□□□ -2.26
SLX4YLR135W SKG1P36169 355 aa0.91□□□□□ -2.26
SLX4YLR135W MRPL17P36528 281 aa0.91□□□□□ -2.26
SLX4YLR135W FMP23P38231 175 aa0.91□□□□□ -2.26
SLX4YLR135W PHO88P38264 188 aaPredicted RBP0.91□□□□□ -2.26
SLX4YLR135W UMP1P38293 148 aa0.91□□□□□ -2.26
SLX4YLR135W AST2P39945 430 aaKnown RBP0.91□□□□□ -2.26
SLX4YLR135W YKE4P40544 346 aa0.91□□□□□ -2.26
SLX4YLR135W SKI6P46948 246 aaPredicted RBP0.91□□□□□ -2.26
SLX4YLR135W DOC1P53068 250 aa0.91□□□□□ -2.26
SLX4YLR135W HOP2P53187 214 aa0.91□□□□□ -2.26
SLX4YLR135W GAS3Q03655 524 aa0.91□□□□□ -2.26
SLX4YLR135W ARO80Q04052 950 aa0.91□□□□□ -2.26
SLX4YLR135W YHR214C-EQ8TGK0 99 aa0.91□□□□□ -2.26
SLX4YLR135W YIL177CP40434 1758 aa0.91□□□□□ -2.26
SLX4YLR135W YJL225CP40889 1758 aa0.91□□□□□ -2.26
SLX4YLR135W SNF6P18888 332 aa0.91□□□□□ -2.26
SLX4YLR135W MRPS28P21771 286 aa0.91□□□□□ -2.26
SLX4YLR135W SHE2P36068 246 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
SLX4YLR135W ERV15P38312 142 aa0.91□□□□□ -2.26
SLX4YLR135W SHG1P38337 142 aa0.91□□□□□ -2.26
SLX4YLR135W EGD2P38879 174 aaKnown RBP0.91□□□□□ -2.26
SLX4YLR135W RPL33BP41056 107 aaKnown RBP0.91□□□□□ -2.26
SLX4YLR135W CIS3P47001 227 aa0.91□□□□□ -2.26
SLX4YLR135W AIM25P47140 327 aa0.91□□□□□ -2.26
SLX4YLR135W DAN1P47178 298 aa0.91□□□□□ -2.26
SLX4YLR135W UBC12P52491 188 aa0.91□□□□□ -2.26
SLX4YLR135W YNL184CP53876 108 aa0.91□□□□□ -2.26
SLX4YLR135W TLG1Q03322 224 aa0.91□□□□□ -2.26
SLX4YLR135W SPG3Q04398 127 aaPredicted RBP0.91□□□□□ -2.26
SLX4YLR135W YET3Q07451 203 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 117 ms