RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	IRC18	P47056	224 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	1.13	□□□□□ -2.23	not detected
SMC4	YLR086W	YNL046W	P53956	172 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	RSM10	Q03201	203 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YDR248C	Q03786	193 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YOR029W	Q12243	111 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	SNU23	Q12368	194 aa	Predicted RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	YPL247C	Q12523	523 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	FAS2	P19097	1887 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	YMR316C-A	I2HB70	103 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	TKL2	P33315	681 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	RPS1A	P33442	255 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	JEN1	P36035	616 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YBR063C	P38083	404 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	MIG2	P53035	382 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	BRR6	P53062	197 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	NIF3	P53081	288 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	EFM5	P53200	248 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	COG5	P53951	403 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	SWP1	Q02795	286 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	SPG4	Q04438	115 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	MRX8	Q05473	314 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YPR114W	Q06107	315 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YPR063C	Q12160	140 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	TPO4	Q12256	659 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YBL112C	Q3E7Y4	105 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YCL012C	Q8J0M4	134 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	NTF2	P33331	125 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	CUE1	P38428	203 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YIL001W	P40560	513 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	RMR1	P53060	241 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	GTR2	P53290	341 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	EBS1	Q03466	884 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	YMR244W	Q04018	355 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	GTO3	Q04806	366 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	MHF2	Q3E829	80 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	IMP1	P28627	190 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	AST1	P35183	429 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	VPS51	P36116	164 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.12	□□□□□ -2.23	RIP-Chip
SMC4	YLR086W	PHO89	P38361	574 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	WSC4	P38739	605 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	DOG1	P38774	246 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	MOB1	P40484	314 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	HIT1	P46973	164 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	CWC23	P52868	283 aa	Predicted RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	DIG2	Q03373	323 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	YPR098C	Q06089	161 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YOL107W	Q12239	342 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	THP2	O13539	261 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	CPA1	P07258	411 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	DPM1	P14020	267 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	STP22	P25604	385 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	TAF14	P35189	244 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	COS8	P38723	381 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	ARN2	P38724	620 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	MGA1	P53050	456 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	CAX4	P53223	239 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	NQM1	P53228	333 aa	Predicted RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	YKR005C	Q02203	525 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YDR222W	Q04925	415 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	NEJ1	Q06148	342 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	GPM2	Q12008	311 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	TIM22	Q12328	207 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	DCN1	Q12395	269 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	AGC1	Q12482	902 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YDL012C	Q12489	107 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	LSO2	Q3E772	92 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	YOR032W-A	Q8TGS1	66 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YPL229W	Q99395	206 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	RPL26A	P05743	127 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	YKR104W	P0CE69	306 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	DOA4	P32571	926 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	AGA2	P32781	87 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	SFC1	P33303	322 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	MRPL15	P36523	253 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	LDB7	P38210	180 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	AIM18	P38884	321 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	COX15	P40086	486 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	AYR1	P40471	297 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YJR056C	P47115	236 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	MDM34	P53083	459 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YGL101W	P53144	215 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	RPL26B	P53221	127 aa	Known RBP	1.12	□□□□□ -2.23
SMC4	YLR086W	ABF2	Q02486	183 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	CDC123	Q05791	360 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YPR172W	Q06608	200 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	ZEO1	Q08245	113 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	YPL278C	Q08990	100 aa		1.12	□□□□□ -2.23
SMC4	YLR086W	DUR1,2	P32528	1835 aa	Known RBP	1.11	□□□□□ -2.23
SMC4	YLR086W	GSC2	P40989	1895 aa		1.11	□□□□□ -2.23
SMC4	YLR086W	SCL1	P21243	252 aa	Known RBP	1.11	□□□□□ -2.23
SMC4	YLR086W	IDP1	P21954	428 aa	Known RBP	1.11	□□□□□ -2.23
SMC4	YLR086W	YCR090C	P25654	182 aa	Known RBP	1.11	□□□□□ -2.23
SMC4	YLR086W	YCR099C	P25657	155 aa		1.11	□□□□□ -2.23
SMC4	YLR086W	MSN4	P33749	630 aa		1.11	□□□□□ -2.23
SMC4	YLR086W	PDS1	P40316	373 aa	Predicted RBP	1.11	□□□□□ -2.23
SMC4	YLR086W	RPA43	P46669	326 aa		1.11	□□□□□ -2.23
SMC4	YLR086W	PAC10	P48363	199 aa		1.11	□□□□□ -2.23
SMC4	YLR086W	COS6	P53344	381 aa		1.11	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms