RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNU114	YKL173W	CWC27	Q02770	301 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	SWP1	Q02795	286 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	YMR279C	Q03263	540 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	CTR3	Q06686	241 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	PPT2	Q12036	173 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	YAL063C-A	Q3E791	96 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.92	□□□□□ -2.1
SNU114	YKL173W	TOR2	P32600	2474 aa	Known RBP	1.92	□□□□□ -2.1
SNU114	YKL173W	MHP1	P43638	1398 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	CDC7	P06243	507 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	STE7	P06784	515 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	YOL163W	P0CF20	169 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	CTA1	P15202	515 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	YBL010C	P32788	280 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	LSM12	P38828	187 aa	Known RBP	1.92	□□□□□ -2.1
SNU114	YKL173W	HAC1	P41546	238 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	GLC8	P41818	229 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	YFL067W	P43537	175 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	BRR6	P53062	197 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	PDR17	P53844	350 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	ARC18	Q05933	178 aa	Known RBP	1.92	□□□□□ -2.1
SNU114	YKL173W	MHR1	Q06630	226 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	MMT2	Q08970	484 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	RIB3	Q99258	208 aa		1.92	□□□□□ -2.1
SNU114	YKL173W	FAS2	P19097	1887 aa	Known RBP	1.92	□□□□□ -2.1
SNU114	YKL173W	GPA2	P10823	449 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	PET9	P18239	318 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	TRM7	P38238	310 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	SLM6	P38343	150 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	FCY21	P40039	528 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	PGD1	P40356	397 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YJR012C	P47087	207 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	GPI14	P47088	403 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	CPR7	P47103	393 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	ILM1	P47155	203 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	UBC12	P52491	188 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YGL034C	P53186	121 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	PBA1	Q05778	276 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YLR177W	Q06251	628 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	AKR2	Q12013	749 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	IES3	Q12345	250 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	RTR2	Q12378	196 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	CDC8	P00572	216 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	ZWF1	P11412	505 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	SUI1	P32911	108 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	CUE1	P38428	203 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YHL049C	P38722	271 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	EFM1	P38732	585 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	RIO2	P40160	425 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	MAM33	P40513	266 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YJL016W	P47072	561 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	FMP41	P53889	259 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	YLR152C	P54072	576 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	PKR1	Q03880	122 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	HRD1	Q08109	551 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	TIR4	Q12218	487 aa	Predicted RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	TRM10	Q12400	293 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	TOR1	P35169	2470 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YHR139C-A	O13536	103 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	CDC28	P00546	298 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	RSA4	P25382	515 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	SDH3	P33421	198 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YBR220C	P38318	560 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YGP1	P38616	354 aa	Known RBP	1.91	□□□□□ -2.1
SNU114	YKL173W	RRG9	P40156	214 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	FAR7	P43592	221 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	BIR1	P47134	954 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	USE1	P53146	245 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	AIM34	Q03673	198 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YDR249C	Q03787	373 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	YMR244W	Q04018	355 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	TRM12	Q04235	462 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	GRX8	Q05926	109 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	ZEO1	Q08245	113 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	JID1	Q12350	301 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	NAG1	Q8TGN9	163 aa		1.91	□□□□□ -2.1
SNU114	YKL173W	SUA7	P29055	345 aa	Predicted RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	AVT7	P40501	490 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	YPI1	P43587	155 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	ACT1	P60010	375 aa	Known RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	PET191	Q02772	108 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	YPL113C	Q02961	396 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	YML018C	Q03730	393 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	YDR391C	Q04170	232 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	FSH2	Q05015	223 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	PST2	Q12335	198 aa	Known RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	YPL119C-A	Q3E751	87 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	MRS1	P07266	363 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	NSP1	P14907	823 aa	Known RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	URA10	P30402	227 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	TFC1	P32367	649 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	GSP1	P32835	219 aa	Known RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	GSP2	P32836	220 aa	Known RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	ECM33	P38248	429 aa	Known RBP	1.9	□□□□□ -2.11
SNU114	YKL173W	TRS20	P38334	175 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	ECM14	P38836	430 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	MCM22	P47167	239 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	COQ5	P49017	307 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	TRM9	P49957	279 aa		1.9	□□□□□ -2.11
SNU114	YKL173W	PRM8	P53174	237 aa		1.9	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms