RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W CWC27Q02770 301 aa1.92□□□□□ -2.1
SNU114YKL173W SWP1Q02795 286 aa1.92□□□□□ -2.1
SNU114YKL173W YMR279CQ03263 540 aa1.92□□□□□ -2.1
SNU114YKL173W CTR3Q06686 241 aa1.92□□□□□ -2.1
SNU114YKL173W PPT2Q12036 173 aa1.92□□□□□ -2.1
SNU114YKL173W YAL063C-AQ3E791 96 aa1.92□□□□□ -2.1
SNU114YKL173W RPS28AQ3E7X9 67 aaPredicted RBP1.92□□□□□ -2.1
SNU114YKL173W TOR2P32600 2474 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W MHP1P43638 1398 aa1.92□□□□□ -2.1
SNU114YKL173W CDC7P06243 507 aa1.92□□□□□ -2.1
SNU114YKL173W STE7P06784 515 aa1.92□□□□□ -2.1
SNU114YKL173W YOL163WP0CF20 169 aa1.92□□□□□ -2.1
SNU114YKL173W CTA1P15202 515 aa1.92□□□□□ -2.1
SNU114YKL173W YBL010CP32788 280 aa1.92□□□□□ -2.1
SNU114YKL173W LSM12P38828 187 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W HAC1P41546 238 aa1.92□□□□□ -2.1
SNU114YKL173W GLC8P41818 229 aa1.92□□□□□ -2.1
SNU114YKL173W YFL067WP43537 175 aa1.92□□□□□ -2.1
SNU114YKL173W BRR6P53062 197 aa1.92□□□□□ -2.1
SNU114YKL173W PDR17P53844 350 aa1.92□□□□□ -2.1
SNU114YKL173W ARC18Q05933 178 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W MHR1Q06630 226 aa1.92□□□□□ -2.1
SNU114YKL173W MMT2Q08970 484 aa1.92□□□□□ -2.1
SNU114YKL173W RIB3Q99258 208 aa1.92□□□□□ -2.1
SNU114YKL173W FAS2P19097 1887 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W GPA2P10823 449 aa1.91□□□□□ -2.1
SNU114YKL173W PET9P18239 318 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W TRM7P38238 310 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W SLM6P38343 150 aa1.91□□□□□ -2.1
SNU114YKL173W FCY21P40039 528 aa1.91□□□□□ -2.1
SNU114YKL173W PGD1P40356 397 aa1.91□□□□□ -2.1
SNU114YKL173W YJR012CP47087 207 aa1.91□□□□□ -2.1
SNU114YKL173W GPI14P47088 403 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W CPR7P47103 393 aa1.91□□□□□ -2.1
SNU114YKL173W ILM1P47155 203 aa1.91□□□□□ -2.1
SNU114YKL173W UBC12P52491 188 aa1.91□□□□□ -2.1
SNU114YKL173W YGL034CP53186 121 aa1.91□□□□□ -2.1
SNU114YKL173W PBA1Q05778 276 aa1.91□□□□□ -2.1
SNU114YKL173W YLR177WQ06251 628 aa1.91□□□□□ -2.1
SNU114YKL173W AKR2Q12013 749 aa1.91□□□□□ -2.1
SNU114YKL173W IES3Q12345 250 aa1.91□□□□□ -2.1
SNU114YKL173W RTR2Q12378 196 aa1.91□□□□□ -2.1
SNU114YKL173W CDC8P00572 216 aa1.91□□□□□ -2.1
SNU114YKL173W ZWF1P11412 505 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W SUI1P32911 108 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W CUE1P38428 203 aa1.91□□□□□ -2.1
SNU114YKL173W YHL049CP38722 271 aa1.91□□□□□ -2.1
SNU114YKL173W EFM1P38732 585 aa1.91□□□□□ -2.1
SNU114YKL173W RIO2P40160 425 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W MAM33P40513 266 aa1.91□□□□□ -2.1
SNU114YKL173W YJL016WP47072 561 aa1.91□□□□□ -2.1
SNU114YKL173W FMP41P53889 259 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W YLR152CP54072 576 aa1.91□□□□□ -2.1
SNU114YKL173W PKR1Q03880 122 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W HRD1Q08109 551 aa1.91□□□□□ -2.1
SNU114YKL173W TIR4Q12218 487 aaPredicted RBP1.91□□□□□ -2.1
SNU114YKL173W TRM10Q12400 293 aa1.91□□□□□ -2.1
SNU114YKL173W TOR1P35169 2470 aa1.91□□□□□ -2.1
SNU114YKL173W YHR139C-AO13536 103 aa1.91□□□□□ -2.1
SNU114YKL173W CDC28P00546 298 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W RSA4P25382 515 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W SDH3P33421 198 aa1.91□□□□□ -2.1
SNU114YKL173W YBR220CP38318 560 aa1.91□□□□□ -2.1
SNU114YKL173W YGP1P38616 354 aaKnown RBP1.91□□□□□ -2.1
SNU114YKL173W RRG9P40156 214 aa1.91□□□□□ -2.1
SNU114YKL173W FAR7P43592 221 aa1.91□□□□□ -2.1
SNU114YKL173W BIR1P47134 954 aa1.91□□□□□ -2.1
SNU114YKL173W USE1P53146 245 aa1.91□□□□□ -2.1
SNU114YKL173W AIM34Q03673 198 aa1.91□□□□□ -2.1
SNU114YKL173W YDR249CQ03787 373 aa1.91□□□□□ -2.1
SNU114YKL173W YMR244WQ04018 355 aa1.91□□□□□ -2.1
SNU114YKL173W TRM12Q04235 462 aa1.91□□□□□ -2.1
SNU114YKL173W GRX8Q05926 109 aa1.91□□□□□ -2.1
SNU114YKL173W ZEO1Q08245 113 aa1.91□□□□□ -2.1
SNU114YKL173W JID1Q12350 301 aa1.91□□□□□ -2.1
SNU114YKL173W NAG1Q8TGN9 163 aa1.91□□□□□ -2.1
SNU114YKL173W SUA7P29055 345 aaPredicted RBP1.9□□□□□ -2.11
SNU114YKL173W AVT7P40501 490 aa1.9□□□□□ -2.11
SNU114YKL173W YPI1P43587 155 aa1.9□□□□□ -2.11
SNU114YKL173W ACT1P60010 375 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W PET191Q02772 108 aa1.9□□□□□ -2.11
SNU114YKL173W YPL113CQ02961 396 aa1.9□□□□□ -2.11
SNU114YKL173W YML018CQ03730 393 aa1.9□□□□□ -2.11
SNU114YKL173W YDR391CQ04170 232 aa1.9□□□□□ -2.11
SNU114YKL173W FSH2Q05015 223 aa1.9□□□□□ -2.11
SNU114YKL173W PST2Q12335 198 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W YPL119C-AQ3E751 87 aa1.9□□□□□ -2.11
SNU114YKL173W MRS1P07266 363 aa1.9□□□□□ -2.11
SNU114YKL173W NSP1P14907 823 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W URA10P30402 227 aa1.9□□□□□ -2.11
SNU114YKL173W TFC1P32367 649 aa1.9□□□□□ -2.11
SNU114YKL173W GSP1P32835 219 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W GSP2P32836 220 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W ECM33P38248 429 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W TRS20P38334 175 aa1.9□□□□□ -2.11
SNU114YKL173W ECM14P38836 430 aa1.9□□□□□ -2.11
SNU114YKL173W MCM22P47167 239 aa1.9□□□□□ -2.11
SNU114YKL173W COQ5P49017 307 aa1.9□□□□□ -2.11
SNU114YKL173W TRM9P49957 279 aa1.9□□□□□ -2.11
SNU114YKL173W PRM8P53174 237 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms