RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	TRI1	Q05024	226 aa		4.26	□□□□□ -1.73
RSC30	YHR056C	RPL9A	P05738	191 aa	Known RBP	4.25	□□□□□ -1.73
RSC30	YHR056C	AHC2	P25649	128 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	PAU2	P32612	120 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	SFK1	P35735	353 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	FMP23	P38231	175 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	SSZ1	P38788	538 aa	Known RBP	4.25	□□□□□ -1.73
RSC30	YHR056C	BOL3	P39724	118 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	DTD1	Q07648	150 aa	Known RBP	4.25	□□□□□ -1.73
RSC30	YHR056C	FUN26	P31381	517 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	PAU24	P38155	120 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	WWM1	P43582	211 aa	Known RBP	4.25	□□□□□ -1.73
RSC30	YHR056C	COX12	Q01519	83 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	RAD28	Q12021	506 aa		4.25	□□□□□ -1.73
RSC30	YHR056C	REC104	P33323	182 aa		4.24	□□□□□ -1.73
RSC30	YHR056C	MRPL38	P35996	138 aa	Predicted RBP	4.24	□□□□□ -1.73
RSC30	YHR056C	POP2	P39008	433 aa		4.24	□□□□□ -1.73
RSC30	YHR056C	YMR130W	Q04223	302 aa		4.24	□□□□□ -1.73
RSC30	YHR056C	PRE7	P23724	241 aa	Known RBP	4.24	□□□□□ -1.73
RSC30	YHR056C	ALG9	P53868	555 aa	Known RBP	4.24	□□□□□ -1.73
RSC30	YHR056C	HNT1	Q04344	158 aa	Known RBP	4.24	□□□□□ -1.73
RSC30	YHR056C	DPB4	Q04603	196 aa	Known RBP	4.24	□□□□□ -1.73
RSC30	YHR056C	YOR292C	Q08743	309 aa		4.24	□□□□□ -1.73
RSC30	YHR056C	YOS1	Q3E834	85 aa		4.24	□□□□□ -1.73
RSC30	YHR056C	ATR1	P13090	542 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	ERG3	P32353	365 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	PDB1	P32473	366 aa	Known RBP	4.23	□□□□□ -1.73
RSC30	YHR056C	SLM4	P38247	162 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	YBR137W	P38276	179 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	RRG8	Q06109	277 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	HRD1	Q08109	551 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	OSW1	Q08692	278 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	CDC31	P06704	161 aa	Known RBP	4.23	□□□□□ -1.73
RSC30	YHR056C	SEC66	P33754	206 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	PDS1	P40316	373 aa	Predicted RBP	4.23	□□□□□ -1.73
RSC30	YHR056C	SYS1	P41544	203 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	ERP6	P53198	216 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	ERV29	P53337	310 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	FYV6	P53913	173 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	CAB5	Q03941	241 aa		4.23	□□□□□ -1.73
RSC30	YHR056C	BUD23	P25627	275 aa	Predicted RBP	4.22	□□□□□ -1.73
RSC30	YHR056C	YLR365W	Q7LIF2	110 aa		4.22	□□□□□ -1.73
RSC30	YHR056C	HBN1	Q96VH4	193 aa		4.22	□□□□□ -1.73
RSC30	YHR056C	CYC7	P00045	113 aa		4.22	□□□□□ -1.73
RSC30	YHR056C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
RSC30	YHR056C	PET18	P25362	215 aa		4.22	□□□□□ -1.73
RSC30	YHR056C	MRPL22	P53881	309 aa		4.22	□□□□□ -1.73
RSC30	YHR056C	PBP4	Q07362	185 aa	Known RBP	4.22	□□□□□ -1.73
RSC30	YHR056C	RPB7	P34087	171 aa		4.21	□□□□□ -1.73
RSC30	YHR056C	YGR042W	P53227	271 aa		4.21	□□□□□ -1.73
RSC30	YHR056C	HLR1	Q04429	423 aa		4.21	□□□□□ -1.73
RSC30	YHR056C	VPS63	O13549	108 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	GPM1	P00950	247 aa	Known RBP	4.21	□□□□□ -1.74
RSC30	YHR056C	RFA1	P22336	621 aa	Known RBP	4.21	□□□□□ -1.74
RSC30	YHR056C	CNE1	P27825	502 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	AIM20	P40451	204 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	GAT4	P40569	121 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	TDA4	P47153	279 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	CTF19	Q02732	369 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	ASM4	Q05166	528 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	ATG39	Q06159	398 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	YPL199C	Q08954	240 aa		4.21	□□□□□ -1.74
RSC30	YHR056C	URA3	P03962	267 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	CDC34	P14682	295 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	YHR138C	P38841	114 aa	Predicted RBP	4.2	□□□□□ -1.74
RSC30	YHR056C	FMC1	P40491	155 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	SNL1	P40548	159 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	SSU72	P53538	206 aa	Predicted RBP	4.2	□□□□□ -1.74
RSC30	YHR056C	YOR192C-C	Q3E736	78 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	BOL1	Q3E793	110 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	HTB1	P02293	131 aa	Known RBP	4.2	□□□□□ -1.74
RSC30	YHR056C	YKR045C	P36138	183 aa		4.2	□□□□□ -1.74
RSC30	YHR056C	RDS3	Q06835	107 aa	Predicted RBP	4.2	□□□□□ -1.74
RSC30	YHR056C	CHO1	P08456	276 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	NRG2	P38082	220 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	QDR3	P38227	689 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	GPI14	P47088	403 aa	Known RBP	4.19	□□□□□ -1.74
RSC30	YHR056C	CPD1	P53314	239 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	VBA1	Q04301	562 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RSC30	YHR056C	YBL010C	P32788	280 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	VAM7	P32912	316 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	UPS2	P35200	230 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	YBR197C	P38306	217 aa		4.19	□□□□□ -1.74
RSC30	YHR056C	ERV25	P54837	211 aa	Known RBP	4.19	□□□□□ -1.74
RSC30	YHR056C	AAC1	P04710	309 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	PET494	P07390	489 aa	Predicted RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	VMA5	P31412	392 aa	Known RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	ERG24	P32462	438 aa	Known RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	RTT105	P40063	208 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	GNP1	P48813	663 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	STP4	Q07351	490 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	TY1A-NL1	Q12391	440 aa	Known RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	ATG31	Q12421	196 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	YPR108W-A	Q3E7B3	70 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	NVJ1	P38881	321 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	IMD3	P50095	523 aa	Known RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	ARO8	P53090	500 aa	Known RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	SLX9	P53251	210 aa	Predicted RBP	4.18	□□□□□ -1.74
RSC30	YHR056C	YMR252C	Q04814	134 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms