RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W FUS3P16892 353 aaKnown RBP4.71□□□□□ -1.66
VMA16YHR026W VMA5P31412 392 aaKnown RBP4.71□□□□□ -1.66
VMA16YHR026W AFG1P32317 509 aa4.71□□□□□ -1.66
VMA16YHR026W MRP20P32387 263 aa4.71□□□□□ -1.66
VMA16YHR026W ECM25P32525 599 aa4.71□□□□□ -1.66
VMA16YHR026W PDC2P32896 925 aa4.71□□□□□ -1.66
VMA16YHR026W MRPL39P36533 70 aa4.71□□□□□ -1.66
VMA16YHR026W LAG1P38703 411 aa4.71□□□□□ -1.66
VMA16YHR026W GCV3P39726 170 aaPredicted RBP4.71□□□□□ -1.66
VMA16YHR026W RPL13BP40212 199 aaKnown RBP4.71□□□□□ -1.66
VMA16YHR026W TAD2P47058 250 aa4.71□□□□□ -1.66
VMA16YHR026W NIF3P53081 288 aa4.71□□□□□ -1.66
VMA16YHR026W RNH201P53942 307 aa4.71□□□□□ -1.66
VMA16YHR026W ACS1Q01574 713 aa4.71□□□□□ -1.66
VMA16YHR026W MSA1Q08471 629 aa4.71□□□□□ -1.66
VMA16YHR026W ISA2Q12425 185 aa4.71□□□□□ -1.66
VMA16YHR026W RPL13AQ12690 199 aaPredicted RBP4.71□□□□□ -1.66
VMA16YHR026W YHR214C-EQ8TGK0 99 aa4.71□□□□□ -1.66
VMA16YHR026W YHR213W-AQ8TGT4 77 aa4.71□□□□□ -1.66
VMA16YHR026W ERG3P32353 365 aa4.7□□□□□ -1.66
VMA16YHR026W ARO4P32449 370 aaKnown RBP4.7□□□□□ -1.66
VMA16YHR026W EMP24P32803 203 aaKnown RBP4.7□□□□□ -1.66
VMA16YHR026W CBT1P36038 271 aaPredicted RBP4.7□□□□□ -1.66
VMA16YHR026W YBR220CP38318 560 aa4.7□□□□□ -1.66
VMA16YHR026W YHL044WP38727 235 aa4.7□□□□□ -1.66
VMA16YHR026W LSM12P38828 187 aaKnown RBP4.7□□□□□ -1.66
VMA16YHR026W MTC6P38849 526 aa4.7□□□□□ -1.66
VMA16YHR026W ASP1P38986 381 aaPredicted RBP4.7□□□□□ -1.66
VMA16YHR026W CWC25P53854 179 aaKnown RBP4.7□□□□□ -1.66
VMA16YHR026W RSM23Q01163 450 aa4.7□□□□□ -1.66
VMA16YHR026W YML018CQ03730 393 aa4.7□□□□□ -1.66
VMA16YHR026W YDR248CQ03786 193 aa4.7□□□□□ -1.66
VMA16YHR026W MRX9Q07349 420 aaKnown RBP4.7□□□□□ -1.66
VMA16YHR026W SCP1Q08873 200 aa4.7□□□□□ -1.66
VMA16YHR026W VAM3Q12241 283 aa4.7□□□□□ -1.66
VMA16YHR026W TFC7Q12415 435 aa4.7□□□□□ -1.66
VMA16YHR026W URA2P07259 2214 aaKnown RBP4.7□□□□□ -1.66
VMA16YHR026W SGA1P08019 549 aa4.69□□□□□ -1.66
VMA16YHR026W SRB6P32570 121 aa4.69□□□□□ -1.66
VMA16YHR026W YKL102CP34249 101 aa4.69□□□□□ -1.66
VMA16YHR026W COS9P36034 407 aa4.69□□□□□ -1.66
VMA16YHR026W POP8P38208 133 aa4.69□□□□□ -1.66
VMA16YHR026W SSO2P39926 295 aa4.69□□□□□ -1.66
VMA16YHR026W GNA1P43577 159 aaPredicted RBP4.69□□□□□ -1.66
VMA16YHR026W AVT4P50944 713 aa4.69□□□□□ -1.66
VMA16YHR026W YGL159WP53110 370 aa4.69□□□□□ -1.66
VMA16YHR026W PEF1P53238 335 aa4.69□□□□□ -1.66
VMA16YHR026W PCP1P53259 346 aa4.69□□□□□ -1.66
VMA16YHR026W OKP1P53298 406 aa4.69□□□□□ -1.66
VMA16YHR026W ALG9P53868 555 aaKnown RBP4.69□□□□□ -1.66
VMA16YHR026W ACT1P60010 375 aaKnown RBP4.69□□□□□ -1.66
VMA16YHR026W HHT1P61830 136 aa4.69□□□□□ -1.66
VMA16YHR026W YDR102CQ03864 110 aa4.69□□□□□ -1.66
VMA16YHR026W CAB5Q03941 241 aa4.69□□□□□ -1.66
VMA16YHR026W YDR387CQ04162 555 aa4.69□□□□□ -1.66
VMA16YHR026W RTT103Q05543 409 aa4.69□□□□□ -1.66
VMA16YHR026W USB1Q12208 290 aaKnown RBP4.69□□□□□ -1.66
VMA16YHR026W YDL180WQ12301 547 aa4.69□□□□□ -1.66
VMA16YHR026W YER145C-AA0A023PYF4 145 aa4.68□□□□□ -1.66
VMA16YHR026W TDH3P00359 332 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
VMA16YHR026W TPI1P00942 248 aaKnown RBP4.68□□□□□ -1.66
VMA16YHR026W MES1P00958 751 aaKnown RBP4.68□□□□□ -1.66
VMA16YHR026W GAL1P04385 528 aa4.68□□□□□ -1.66
VMA16YHR026W SPS4P09937 338 aa4.68□□□□□ -1.66
VMA16YHR026W SEC22P22214 214 aa4.68□□□□□ -1.66
VMA16YHR026W MIR1P23641 311 aaKnown RBP4.68□□□□□ -1.66
VMA16YHR026W LDS1P31379 325 aa4.68□□□□□ -1.66
VMA16YHR026W YBL010CP32788 280 aa4.68□□□□□ -1.66
VMA16YHR026W YER188WP40103 239 aa4.68□□□□□ -1.66
VMA16YHR026W MOB2P43563 287 aa4.68□□□□□ -1.66
VMA16YHR026W CTK2P46962 323 aa4.68□□□□□ -1.66
VMA16YHR026W PNC1P53184 216 aaKnown RBP4.68□□□□□ -1.66
VMA16YHR026W YNR048WP53740 393 aa4.68□□□□□ -1.66
VMA16YHR026W CAC2Q04199 468 aa4.68□□□□□ -1.66
VMA16YHR026W ARR3Q06598 404 aa4.68□□□□□ -1.66
VMA16YHR026W GRC3Q07845 632 aa4.68□□□□□ -1.66
VMA16YHR026W QCR2P07257 368 aa4.67□□□□□ -1.66
VMA16YHR026W RPL30P14120 105 aaKnown RBP4.67□□□□□ -1.66
VMA16YHR026W CNB1P25296 175 aa4.67□□□□□ -1.66
VMA16YHR026W YCR101CP25607 182 aa4.67□□□□□ -1.66
VMA16YHR026W VMA8P32610 256 aaKnown RBP4.67□□□□□ -1.66
VMA16YHR026W VAM7P32912 316 aa4.67□□□□□ -1.66
VMA16YHR026W SOF1P33750 489 aaKnown RBP4.67□□□□□ -1.66
VMA16YHR026W SHG1P38337 142 aa4.67□□□□□ -1.66
VMA16YHR026W LNP1P38878 278 aa4.67□□□□□ -1.66
VMA16YHR026W YIR035CP40579 254 aa4.67□□□□□ -1.66
VMA16YHR026W YJL016WP47072 561 aa4.67□□□□□ -1.66
VMA16YHR026W YJR111CP47148 283 aaKnown RBP4.67□□□□□ -1.66
VMA16YHR026W UFD1P53044 361 aa4.67□□□□□ -1.66
VMA16YHR026W NSA1P53136 463 aaPredicted RBP4.67□□□□□ -1.66
VMA16YHR026W MRPL19P53875 158 aa4.67□□□□□ -1.66
VMA16YHR026W ODC1Q03028 310 aa4.67□□□□□ -1.66
VMA16YHR026W COQ11Q05892 277 aa4.67□□□□□ -1.66
VMA16YHR026W ATP16Q12165 160 aa4.67□□□□□ -1.66
VMA16YHR026W YCT1Q12235 531 aa4.67□□□□□ -1.66
VMA16YHR026W MED4Q12343 284 aa4.67□□□□□ -1.66
VMA16YHR026W EAF3Q12432 401 aa4.67□□□□□ -1.66
VMA16YHR026W ERP4Q12450 207 aa4.67□□□□□ -1.66
VMA16YHR026W UBA3Q99344 299 aa4.67□□□□□ -1.66
VMA16YHR026W TDH1P00360 332 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms