RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W CLP1Q08685 445 aaPredicted RBP2.6□□□□□ -1.99
PTI1YGR156W YBL008W-AQ3E821 79 aa2.6□□□□□ -1.99
PTI1YGR156W ISD11Q6Q560 94 aa2.6□□□□□ -1.99
PTI1YGR156W YHR139C-AO13536 103 aa2.59□□□□□ -1.99
PTI1YGR156W YPK2P18961 677 aa2.59□□□□□ -1.99
PTI1YGR156W FPR1P20081 114 aaKnown RBP2.59□□□□□ -1.99
PTI1YGR156W RFC4P40339 323 aaKnown RBP2.59□□□□□ -1.99
PTI1YGR156W NUP57P48837 541 aa2.59□□□□□ -1.99
PTI1YGR156W NIF3P53081 288 aa2.59□□□□□ -1.99
PTI1YGR156W ALG13P53178 202 aa2.59□□□□□ -1.99
PTI1YGR156W SYF2P53277 215 aaPredicted RBP2.59□□□□□ -1.99
PTI1YGR156W RSM27P53305 110 aa2.59□□□□□ -1.99
PTI1YGR156W GIM3P53900 129 aa2.59□□□□□ -1.99
PTI1YGR156W GOT1Q03554 138 aa2.59□□□□□ -1.99
PTI1YGR156W SUE1Q06524 206 aa2.59□□□□□ -1.99
PTI1YGR156W IES3Q12345 250 aa2.59□□□□□ -1.99
PTI1YGR156W IRA1P18963 3092 aa2.58□□□□□ -2
PTI1YGR156W CCH1P50077 2039 aa2.58□□□□□ -2
PTI1YGR156W RFA3P26755 122 aaKnown RBP2.58□□□□□ -2
PTI1YGR156W IKI1P38874 309 aa2.58□□□□□ -2
PTI1YGR156W PEX17P40155 199 aa2.58□□□□□ -2
PTI1YGR156W YMR144WP40214 342 aaKnown RBP2.58□□□□□ -2
PTI1YGR156W ADO1P47143 340 aaKnown RBP2.58□□□□□ -2
PTI1YGR156W BRR6P53062 197 aa2.58□□□□□ -2
PTI1YGR156W MDM34P53083 459 aa2.58□□□□□ -2
PTI1YGR156W FYV6P53913 173 aa2.58□□□□□ -2
PTI1YGR156W DID2P69771 204 aa2.58□□□□□ -2
PTI1YGR156W YPR172WQ06608 200 aa2.58□□□□□ -2
PTI1YGR156W MSA1Q08471 629 aa2.58□□□□□ -2
PTI1YGR156W ABP140Q08641 628 aaKnown RBP2.58□□□□□ -2
PTI1YGR156W FMP27Q06179 2628 aa2.58□□□□□ -2
PTI1YGR156W SGA1P08019 549 aa2.57□□□□□ -2
PTI1YGR156W URA6P15700 204 aa2.57□□□□□ -2
PTI1YGR156W SFC1P33303 322 aa2.57□□□□□ -2
PTI1YGR156W IRC18P47056 224 aa2.57□□□□□ -2
PTI1YGR156W YOL019WQ08157 551 aa2.57□□□□□ -2
PTI1YGR156W JLP1Q12358 412 aa2.57□□□□□ -2
PTI1YGR156W YLR422WQ06409 1932 aa2.57□□□□□ -2
PTI1YGR156W YLR462WO13556 202 aa2.56□□□□□ -2
PTI1YGR156W HIS3P06633 220 aa2.56□□□□□ -2
PTI1YGR156W MATALPHA2P0CY08 210 aa2.56□□□□□ -2
PTI1YGR156W HMLALPHA2P0CY09 210 aa2.56□□□□□ -2
PTI1YGR156W ADE1P27616 306 aa2.56□□□□□ -2
PTI1YGR156W AGA2P32781 87 aa2.56□□□□□ -2
PTI1YGR156W TKL2P33315 681 aa2.56□□□□□ -2
PTI1YGR156W AST1P35183 429 aa2.56□□□□□ -2
PTI1YGR156W PRY2P36110 329 aa2.56□□□□□ -2
PTI1YGR156W ECM14P38836 430 aa2.56□□□□□ -2
PTI1YGR156W YEL075CP39972 122 aa2.56□□□□□ -2
PTI1YGR156W YRB2P40517 327 aa2.56□□□□□ -2
PTI1YGR156W NOP19P53317 196 aaPredicted RBP2.56□□□□□ -2
PTI1YGR156W RSM10Q03201 203 aa2.56□□□□□ -2
PTI1YGR156W FAR8Q05040 523 aa2.56□□□□□ -2
PTI1YGR156W IES4Q08561 116 aa2.56□□□□□ -2
PTI1YGR156W YPL150WQ12152 901 aa2.56□□□□□ -2
PTI1YGR156W YPR011CQ12251 326 aa2.56□□□□□ -2
PTI1YGR156W AGC1Q12482 902 aa2.56□□□□□ -2
PTI1YGR156W YEL009C-AA0A023PZF2 135 aa2.55□□□□□ -2
PTI1YGR156W QCR6P00127 147 aa2.55□□□□□ -2
PTI1YGR156W QCR7P00128 127 aa2.55□□□□□ -2
PTI1YGR156W HTB1P02293 131 aaKnown RBP2.55□□□□□ -2
PTI1YGR156W HTB2P02294 131 aa2.55□□□□□ -2
PTI1YGR156W RPL28P02406 149 aaKnown RBP2.55□□□□□ -2
PTI1YGR156W APA2P22108 325 aa2.55□□□□□ -2
PTI1YGR156W GCN1P33892 2672 aaKnown RBP2.55□□□□□ -2
PTI1YGR156W GAA1P39012 614 aa2.55□□□□□ -2
PTI1YGR156W MIG2P53035 382 aa2.55□□□□□ -2
PTI1YGR156W RTC4P53850 401 aa2.55□□□□□ -2
PTI1YGR156W ALG9P53868 555 aaKnown RBP2.55□□□□□ -2
PTI1YGR156W YPR063CQ12160 140 aa2.55□□□□□ -2
PTI1YGR156W MRX4Q12467 430 aa2.55□□□□□ -2
PTI1YGR156W SEC22P22214 214 aa2.54□□□□□ -2
PTI1YGR156W RNP1P32385 249 aa2.54□□□□□ -2
PTI1YGR156W SSH1P38353 490 aaKnown RBP2.54□□□□□ -2
PTI1YGR156W YIR035CP40579 254 aa2.54□□□□□ -2
PTI1YGR156W RPA43P46669 326 aa2.54□□□□□ -2
PTI1YGR156W GET1P53192 235 aa2.54□□□□□ -2
PTI1YGR156W YLR030WQ07967 263 aa2.54□□□□□ -2
PTI1YGR156W YOR268CQ08734 132 aa2.54□□□□□ -2
PTI1YGR156W YRA1Q12159 226 aaKnown RBP2.54□□□□□ -2
PTI1YGR156W GEP5Q12393 293 aa2.54□□□□□ -2
PTI1YGR156W CDC28P00546 298 aaKnown RBP2.53□□□□□ -2
PTI1YGR156W SEC4P07560 215 aaKnown RBP2.53□□□□□ -2
PTI1YGR156W RPL27AP0C2H6 136 aaKnown RBP2.53□□□□□ -2
PTI1YGR156W RPL27BP0C2H7 136 aaKnown RBP2.53□□□□□ -2
PTI1YGR156W RPS23AP0CX29 145 aaKnown RBP2.53□□□□□ -2
PTI1YGR156W RPS23BP0CX30 145 aa2.53□□□□□ -2
PTI1YGR156W MER1P16523 270 aa2.53□□□□□ -2
PTI1YGR156W CBF1P17106 351 aa2.53□□□□□ -2
PTI1YGR156W IDH1P28834 360 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PTI1YGR156W CAT5P41735 233 aa2.53□□□□□ -2
PTI1YGR156W PFS2P42841 465 aaKnown RBP2.53□□□□□ -2
PTI1YGR156W FAR7P43592 221 aa2.53□□□□□ -2
PTI1YGR156W ECO1P43605 281 aa2.53□□□□□ -2
PTI1YGR156W PDR17P53844 350 aa2.53□□□□□ -2
PTI1YGR156W HEM25Q07534 307 aa2.53□□□□□ -2
PTI1YGR156W GPM2Q12008 311 aa2.53□□□□□ -2
PTI1YGR156W PST1Q12355 444 aa2.53□□□□□ -2
PTI1YGR156W DBF2P22204 572 aa2.52□□□□□ -2.01
PTI1YGR156W TCA17P32613 152 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 122.7 ms