RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SUA5	P32579	426 aa		1.32	□□□□□ -2.2
DOT6	YER088C	KRE29	P40026	464 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YER188W	P40103	239 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YIL001W	P40560	513 aa		1.32	□□□□□ -2.2
DOT6	YER088C	AGX1	P43567	385 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YJR141W	P47172	347 aa	Predicted RBP	1.32	□□□□□ -2.2
DOT6	YER088C	RPL22B	P56628	122 aa	Known RBP	1.32	□□□□□ -2.2
DOT6	YER088C	SDC1	Q03323	175 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YML018C	Q03730	393 aa		1.32	□□□□□ -2.2
DOT6	YER088C	ADH6	Q04894	360 aa	Known RBP	1.32	□□□□□ -2.2
DOT6	YER088C	GMC2	Q06201	188 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YLR173W	Q06247	608 aa		1.32	□□□□□ -2.2
DOT6	YER088C	MSA1	Q08471	629 aa		1.32	□□□□□ -2.2
DOT6	YER088C	GRE1	Q08969	168 aa		1.32	□□□□□ -2.2
DOT6	YER088C	BTS1	Q12051	335 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YPR011C	Q12251	326 aa		1.32	□□□□□ -2.2
DOT6	YER088C	TIM22	Q12328	207 aa		1.32	□□□□□ -2.2
DOT6	YER088C	MRX4	Q12467	430 aa		1.32	□□□□□ -2.2
DOT6	YER088C	AGC1	Q12482	902 aa		1.32	□□□□□ -2.2
DOT6	YER088C	HIS3	P06633	220 aa		1.31	□□□□□ -2.2
DOT6	YER088C	SPT3	P06844	337 aa		1.31	□□□□□ -2.2
DOT6	YER088C	RPB4	P20433	221 aa	Predicted RBP	1.31	□□□□□ -2.2
DOT6	YER088C	SEC14	P24280	304 aa	Known RBP	1.31	□□□□□ -2.2
DOT6	YER088C	TRX3	P25372	127 aa		1.31	□□□□□ -2.2
DOT6	YER088C	MRPL39	P36533	70 aa		1.31	□□□□□ -2.2
DOT6	YER088C	POP8	P38208	133 aa		1.31	□□□□□ -2.2
DOT6	YER088C	POP4	P38336	279 aa		1.31	□□□□□ -2.2
DOT6	YER088C	TCD1	P38756	429 aa		1.31	□□□□□ -2.2
DOT6	YER088C	FMP33	P46998	180 aa		1.31	□□□□□ -2.2
DOT6	YER088C	SBH2	P52871	88 aa		1.31	□□□□□ -2.2
DOT6	YER088C	YNL095C	P53932	642 aa		1.31	□□□□□ -2.2
DOT6	YER088C	TIM11	P81449	96 aa	Predicted RBP	1.31	□□□□□ -2.2
DOT6	YER088C	PRM15	Q03262	622 aa		1.31	□□□□□ -2.2
DOT6	YER088C	GOT1	Q03554	138 aa		1.31	□□□□□ -2.2
DOT6	YER088C	TVP15	Q03860	143 aa		1.31	□□□□□ -2.2
DOT6	YER088C	MIX14	Q04341	121 aa		1.31	□□□□□ -2.2
DOT6	YER088C	FCF1	Q05498	189 aa	Predicted RBP	1.31	□□□□□ -2.2
DOT6	YER088C	ARV1	Q06541	321 aa		1.31	□□□□□ -2.2
DOT6	YER088C	YBL112C	Q3E7Y4	105 aa		1.31	□□□□□ -2.2
DOT6	YER088C	MRP1	P10662	321 aa	Known RBP	1.3	□□□□□ -2.2
DOT6	YER088C	GPA2	P10823	449 aa		1.3	□□□□□ -2.2
DOT6	YER088C	TOM40	P23644	387 aa	Known RBP	1.3	□□□□□ -2.2
DOT6	YER088C	UTR5	P32630	166 aa		1.3	□□□□□ -2.2
DOT6	YER088C	PTM1	P32857	523 aa		1.3	□□□□□ -2.2
DOT6	YER088C	RPT5	P33297	434 aa	Known RBP	1.3	□□□□□ -2.2
DOT6	YER088C	ARN2	P38724	620 aa		1.3	□□□□□ -2.2
DOT6	YER088C	YFL051C	P43552	160 aa		1.3	□□□□□ -2.2
DOT6	YER088C	BNA6	P43619	295 aa		1.3	□□□□□ -2.2
DOT6	YER088C	PIR5	P46999	287 aa		1.3	□□□□□ -2.2
DOT6	YER088C	MPA43	P53583	542 aa	Predicted RBP	1.3	□□□□□ -2.2
DOT6	YER088C	YDR249C	Q03787	373 aa		1.3	□□□□□ -2.2
DOT6	YER088C	VBA1	Q04301	562 aa		1.3	□□□□□ -2.2
DOT6	YER088C	SEI1	Q06058	285 aa		1.3	□□□□□ -2.2
DOT6	YER088C	RAF1	Q06891	181 aa		1.3	□□□□□ -2.2
DOT6	YER088C	POM33	Q12164	279 aa		1.3	□□□□□ -2.2
DOT6	YER088C	MHT1	Q12525	324 aa		1.3	□□□□□ -2.2
DOT6	YER088C	COS2	P0CX12	379 aa		1.3	□□□□□ -2.2
DOT6	YER088C	COS3	P0CX13	379 aa		1.3	□□□□□ -2.2
DOT6	YER088C	DBF2	P22204	572 aa		1.3	□□□□□ -2.2
DOT6	YER088C	NTG1	P31378	399 aa		1.3	□□□□□ -2.2
DOT6	YER088C	RPS1A	P33442	255 aa	Known RBP	1.3	□□□□□ -2.2
DOT6	YER088C	VPS51	P36116	164 aa		1.3	□□□□□ -2.2
DOT6	YER088C	FES1	P38260	290 aa		1.3	□□□□□ -2.2
DOT6	YER088C	YIR020C	P40575	100 aa		1.3	□□□□□ -2.2
DOT6	YER088C	MIG2	P53035	382 aa		1.3	□□□□□ -2.2
DOT6	YER088C	FMP41	P53889	259 aa	Known RBP	1.3	□□□□□ -2.2
DOT6	YER088C	YPL039W	Q03080	316 aa		1.3	□□□□□ -2.2
DOT6	YER088C	VPS60	Q03390	229 aa		1.3	□□□□□ -2.2
DOT6	YER088C	COX20	Q04935	205 aa		1.3	□□□□□ -2.2
DOT6	YER088C	NNT1	Q05874	261 aa		1.3	□□□□□ -2.2
DOT6	YER088C	YPR147C	Q06522	304 aa	Known RBP	1.3	□□□□□ -2.2
DOT6	YER088C	GET4	Q12125	312 aa		1.3	□□□□□ -2.2
DOT6	YER088C	YCL012C	Q8J0M4	134 aa		1.3	□□□□□ -2.2
DOT6	YER088C	EHD3	P28817	500 aa		1.29	□□□□□ -2.2
DOT6	YER088C	HSP150	P32478	413 aa		1.29	□□□□□ -2.2
DOT6	YER088C	YBR220C	P38318	560 aa		1.29	□□□□□ -2.2
DOT6	YER088C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	1.29	□□□□□ -2.2	not detected
DOT6	YER088C	SUR2	P38992	349 aa		1.29	□□□□□ -2.2
DOT6	YER088C	YHB1	P39676	399 aa	Known RBP	1.29	□□□□□ -2.2
DOT6	YER088C	AYR1	P40471	297 aa		1.29	□□□□□ -2.2
DOT6	YER088C	FMC1	P40491	155 aa		1.29	□□□□□ -2.2
DOT6	YER088C	YJL118W	P47022	219 aa		1.29	□□□□□ -2.2
DOT6	YER088C	MRPL50	P53724	139 aa		1.29	□□□□□ -2.2
DOT6	YER088C	MNT4	P53745	580 aa		1.29	□□□□□ -2.2
DOT6	YER088C	ALG9	P53868	555 aa	Known RBP	1.29	□□□□□ -2.2
DOT6	YER088C	SWT21	P53873	357 aa	Predicted RBP	1.29	□□□□□ -2.2
DOT6	YER088C	NCE101	Q02820	53 aa		1.29	□□□□□ -2.2
DOT6	YER088C	MIX17	Q03667	156 aa		1.29	□□□□□ -2.2
DOT6	YER088C	YDR114C	Q04597	100 aa		1.29	□□□□□ -2.2
DOT6	YER088C	CTS2	Q06350	511 aa		1.29	□□□□□ -2.2
DOT6	YER088C	YOL019W	Q08157	551 aa		1.29	□□□□□ -2.2
DOT6	YER088C	NOT5	Q12514	560 aa	Predicted RBP	1.29	□□□□□ -2.2
DOT6	YER088C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	1.28	□□□□□ -2.2	not detected
DOT6	YER088C	KSS1	P14681	368 aa		1.28	□□□□□ -2.2
DOT6	YER088C	MGT1	P26188	188 aa		1.28	□□□□□ -2.2
DOT6	YER088C	CAT2	P32796	670 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	MSN4	P33749	630 aa		1.28	□□□□□ -2.2
DOT6	YER088C	VPS21	P36017	210 aa	Known RBP	1.28	□□□□□ -2.2
DOT6	YER088C	YOR062C	P36025	268 aa		1.28	□□□□□ -2.2
DOT6	YER088C	TAD2	P47058	250 aa		1.28	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms