RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	PEF1	P53238	335 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	MED4	Q12343	284 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	PRM4	Q12498	284 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	PET494	P07390	489 aa	Predicted RBP	5.43	□□□□□ -1.54
VMA3	YEL027W	APA2	P22108	325 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	MIR1	P23641	311 aa	Known RBP	5.43	□□□□□ -1.54
VMA3	YEL027W	CNB1	P25296	175 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	YUH1	P35127	236 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	POP8	P38208	133 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	LAG1	P38703	411 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	RRF1	P38771	230 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	AIM46	P38885	310 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	PRM5	P40476	318 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	BNA2	P47125	453 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	ABM1	P47146	123 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	XPT1	P47165	209 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	GEP7	P53171	287 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	CAF40	P53829	373 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	YDR286C	Q05530	114 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	RTT103	Q05543	409 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	SNA4	Q07549	140 aa		5.43	□□□□□ -1.54
VMA3	YEL027W	RDL1	Q12305	139 aa	Known RBP	5.43	□□□□□ -1.54
VMA3	YEL027W	SNU23	Q12368	194 aa	Predicted RBP	5.43	□□□□□ -1.54
VMA3	YEL027W	PUT1	P09368	476 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	POP2	P39008	433 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	RPA34	P47006	233 aa	Predicted RBP	5.42	□□□□□ -1.54
VMA3	YEL027W	UBC12	P52491	188 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	OKP1	P53298	406 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	HSK3	P69852	69 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	NRG1	Q03125	231 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	CAB5	Q03941	241 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	CAC2	Q04199	468 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	FIT1	Q04433	528 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	YDR114C	Q04597	100 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	YLR224W	Q05947	369 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	VAM3	Q12241	283 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	YOR192C-C	Q3E736	78 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	YPR108W-A	Q3E7B3	70 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	YMR105W-A	Q8TGS8	64 aa		5.42	□□□□□ -1.54
VMA3	YEL027W	CCW14	O13547	238 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	YBR085C-A	O43137	85 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	RPL15A	P05748	204 aa	Known RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	RPB9	P27999	122 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	SUA5	P32579	426 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	ISC10	P32645	267 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	CPR5	P35176	225 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	CBT1	P36038	271 aa	Predicted RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	SWD2	P36104	329 aa	Predicted RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	COS8	P38723	381 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	CTR2	P38865	189 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	RIP-Chip
VMA3	YEL027W	PAC2	P39937	518 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	ECM27	P47144	725 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	NIF3	P53081	288 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	SMM1	P53720	384 aa	Known RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	YNR064C	P53750	290 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	MRPL22	P53881	309 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	RPL15B	P54780	204 aa	Predicted RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	MEH1	Q02205	184 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	THI74	Q04083	370 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	DPB4	Q04603	196 aa	Known RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	ECM18	Q04623	453 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	RFM1	Q12192	310 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	AIR2	Q12476	344 aa	Known RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	YGL194C-A	Q2V2P6	80 aa		5.41	□□□□□ -1.54
VMA3	YEL027W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.41	□□□□□ -1.54
VMA3	YEL027W	QCR2	P07257	368 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	OLE1	P21147	510 aa	Known RBP	5.4	□□□□□ -1.54
VMA3	YEL027W	YPC1	P38298	316 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	RIM9	Q04734	239 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	NOC4	Q06512	552 aa	Predicted RBP	5.4	□□□□□ -1.54
VMA3	YEL027W	PRP11	Q07350	266 aa	Predicted RBP	5.4	□□□□□ -1.54
VMA3	YEL027W	CSI2	Q08054	341 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	YOL118C	Q08259	102 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	DGK1	Q12382	290 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	YCL048W-A	Q2V2Q2	79 aa		5.4	□□□□□ -1.54
VMA3	YEL027W	YER145C-A	A0A023PYF4	145 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	GDH1	P07262	454 aa	Known RBP	5.39	□□□□□ -1.55
VMA3	YEL027W	ATP10	P18496	279 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	ACB1	P31787	87 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	TCA17	P32613	152 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	GEP4	P38812	185 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	AIR1	P40507	360 aa	Known RBP	5.39	□□□□□ -1.55
VMA3	YEL027W	IRC24	P40580	263 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	PIR5	P46999	287 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	YHC3	P47040	408 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	TTI2	P47168	421 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	JAC1	P53193	184 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	RPL21A	Q02753	160 aa	Known RBP	5.39	□□□□□ -1.55
VMA3	YEL027W	TSA2	Q04120	196 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	ASM4	Q05166	528 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	YDL086W	Q07505	273 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	YOR292C	Q08743	309 aa		5.39	□□□□□ -1.55
VMA3	YEL027W	RPL21B	Q12672	160 aa	Known RBP	5.39	□□□□□ -1.55
VMA3	YEL027W	GAR1	P28007	205 aa	Known RBP	5.38	□□□□□ -1.55
VMA3	YEL027W	MRP20	P32387	263 aa		5.38	□□□□□ -1.55
VMA3	YEL027W	IES6	P32617	166 aa		5.38	□□□□□ -1.55
VMA3	YEL027W	ATP3	P38077	311 aa	Known RBP	5.38	□□□□□ -1.55
VMA3	YEL027W	GPI18	P38211	433 aa		5.38	□□□□□ -1.55
VMA3	YEL027W	YER188W	P40103	239 aa		5.38	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms