RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C KRR1P25586 316 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C PAU3P25610 124 aa1.97□□□□□ -2.09
SSD1YDR293C ERG24P32462 438 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C EMP24P32803 203 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C VAM7P32912 316 aa1.97□□□□□ -2.09
SSD1YDR293C MRPL39P36533 70 aa1.97□□□□□ -2.09
SSD1YDR293C SAS2P40963 338 aa1.97□□□□□ -2.09
SSD1YDR293C COX16P47081 118 aa1.97□□□□□ -2.09
SSD1YDR293C XPT1P47165 209 aa1.97□□□□□ -2.09
SSD1YDR293C BXI1P48558 297 aa1.97□□□□□ -2.09
SSD1YDR293C YGL262WP53054 175 aa1.97□□□□□ -2.09
SSD1YDR293C NSA1P53136 463 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C SLX9P53251 210 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C VPS28Q02767 242 aa1.97□□□□□ -2.09
SSD1YDR293C AKR2Q12013 749 aa1.97□□□□□ -2.09
SSD1YDR293C YOP1Q12402 180 aa1.97□□□□□ -2.09
SSD1YDR293C AGC1Q12482 902 aa1.97□□□□□ -2.09
SSD1YDR293C YLR146W-AQ2V2P1 62 aa1.97□□□□□ -2.09
SSD1YDR293C MET2P08465 486 aa1.97□□□□□ -2.09
SSD1YDR293C YCP4P25349 247 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C REC114P32841 428 aa1.97□□□□□ -2.09
SSD1YDR293C SWD2P36104 329 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C AUR1P36107 401 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C MTC4P38335 694 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C QRI1P43123 477 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C BPL1P48445 690 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C LYS5P50113 272 aa1.97□□□□□ -2.09
SSD1YDR293C RIB4P50861 169 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C FMP48P53233 369 aa1.97□□□□□ -2.09
SSD1YDR293C YIF1P53845 314 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C ODC1Q03028 310 aa1.97□□□□□ -2.09
SSD1YDR293C TMS1Q12116 473 aa1.97□□□□□ -2.09
SSD1YDR293C FRE8Q12209 686 aa1.97□□□□□ -2.09
SSD1YDR293C YPS3Q12303 508 aa1.97□□□□□ -2.09
SSD1YDR293C UBR1P19812 1950 aa1.97□□□□□ -2.09
SSD1YDR293C CYC7P00045 113 aa1.97□□□□□ -2.09
SSD1YDR293C RPL30P14120 105 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C SAG1P20840 650 aa1.97□□□□□ -2.09
SSD1YDR293C FEN2P25621 512 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C PRE4P30657 266 aa1.97□□□□□ -2.09
SSD1YDR293C AVT5P38176 459 aa1.97□□□□□ -2.09
SSD1YDR293C PRS3P38689 320 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C YEA6P39953 335 aa1.97□□□□□ -2.09
SSD1YDR293C GET2P40056 285 aa1.97□□□□□ -2.09
SSD1YDR293C PHS1P40857 217 aa1.97□□□□□ -2.09
SSD1YDR293C ADO1P47143 340 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C GRX5Q02784 150 aa1.97□□□□□ -2.09
SSD1YDR293C TSA2Q04120 196 aa1.97□□□□□ -2.09
SSD1YDR293C YMR090WQ04304 227 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C PIN3Q06449 215 aa1.97□□□□□ -2.09
SSD1YDR293C RDL2Q08742 149 aaKnown RBP1.97□□□□□ -2.09
SSD1YDR293C TIR4Q12218 487 aaPredicted RBP1.97□□□□□ -2.09
SSD1YDR293C TFC7Q12415 435 aa1.97□□□□□ -2.09
SSD1YDR293C COX19Q3E731 98 aa1.97□□□□□ -2.09
SSD1YDR293C VMA9Q3E7B6 73 aa1.97□□□□□ -2.09
SSD1YDR293C NHP6AP11632 93 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C HNM1P19807 563 aa1.96□□□□□ -2.1
SSD1YDR293C OLE1P21147 510 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C GSH1P32477 678 aa1.96□□□□□ -2.1
SSD1YDR293C SPS18P32572 300 aa1.96□□□□□ -2.1
SSD1YDR293C AIM3P38266 947 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C CHS7P38843 316 aa1.96□□□□□ -2.1
SSD1YDR293C COX15P40086 486 aa1.96□□□□□ -2.1
SSD1YDR293C TIF34P40217 347 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C TEX1P53851 422 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C CWC27Q02770 301 aa1.96□□□□□ -2.1
SSD1YDR293C CTL1Q03220 320 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C DLT1Q04216 342 aa1.96□□□□□ -2.1
SSD1YDR293C DPB4Q04603 196 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C PAL1Q05518 499 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C FCY22Q12119 530 aa1.96□□□□□ -2.1
SSD1YDR293C RPS22BQ3E7Y3 130 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C STT4P37297 1900 aa1.96□□□□□ -2.1
SSD1YDR293C VPS63O13549 108 aa1.96□□□□□ -2.1
SSD1YDR293C CWP1P28319 239 aa1.96□□□□□ -2.1
SSD1YDR293C CDS1P38221 457 aa1.96□□□□□ -2.1
SSD1YDR293C RPB11P38902 120 aa1.96□□□□□ -2.1
SSD1YDR293C FMP52P40008 231 aa1.96□□□□□ -2.1
SSD1YDR293C LSM4P40070 187 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C YGR126WP53274 230 aa1.96□□□□□ -2.1
SSD1YDR293C NUP53Q03790 475 aa1.96□□□□□ -2.1
SSD1YDR293C YAP6Q03935 383 aa1.96□□□□□ -2.1
SSD1YDR293C YPL264CQ08980 353 aa1.96□□□□□ -2.1
SSD1YDR293C IZH2Q12442 317 aa1.96□□□□□ -2.1
SSD1YDR293C PCC1Q3E833 88 aa1.96□□□□□ -2.1
SSD1YDR293C ODC2Q99297 307 aa1.96□□□□□ -2.1
SSD1YDR293C YAL064W-BO13512 126 aa1.96□□□□□ -2.1
SSD1YDR293C GDH1P07262 454 aaKnown RBP1.96□□□□□ -2.1
SSD1YDR293C ATP10P18496 279 aa1.96□□□□□ -2.1
SSD1YDR293C LDB16P25587 256 aa1.96□□□□□ -2.1
SSD1YDR293C RIB5P38145 238 aa1.96□□□□□ -2.1
SSD1YDR293C ECM34P38728 170 aa1.96□□□□□ -2.1
SSD1YDR293C GWT1P47026 490 aa1.96□□□□□ -2.1
SSD1YDR293C YHC3P47040 408 aa1.96□□□□□ -2.1
SSD1YDR293C OCA1P50946 238 aaPredicted RBP1.96□□□□□ -2.1
SSD1YDR293C CDH1P53197 566 aa1.96□□□□□ -2.1
SSD1YDR293C SNO2P53823 222 aa1.96□□□□□ -2.1
SSD1YDR293C COA4Q05809 96 aa1.96□□□□□ -2.1
SSD1YDR293C HEM25Q07534 307 aa1.96□□□□□ -2.1
SSD1YDR293C USV1Q12132 391 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 76.1 ms